Wall clock time and date at job start Sun Mar 7 2021 07:13:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.46884 * 2 1 4 4 C 1.34231 * 116.99983 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00142 * 0.02562 * 4 3 2 6 6 C 1.50698 * 120.00053 * 180.02562 * 4 3 2 7 7 H 1.09001 * 109.47517 * 59.99934 * 6 4 3 8 8 C 1.52999 * 109.47248 * 180.02562 * 6 4 3 9 9 C 1.53000 * 109.47278 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.47098 * 300.00128 * 9 8 6 11 11 H 1.08995 * 109.47554 * 299.99526 * 10 9 8 12 12 C 1.53000 * 109.47098 * 180.02562 * 10 9 8 13 13 N 1.46497 * 109.47590 * 174.99985 * 12 10 9 14 14 C 1.34777 * 120.00482 * 179.97438 * 13 12 10 15 15 O 1.21690 * 119.99970 * 359.97438 * 14 13 12 16 16 C 1.46677 * 120.00040 * 180.02562 * 14 13 12 17 17 C 1.37874 * 126.23437 * 179.71815 * 16 14 13 18 18 C 1.39830 * 107.08673 * 179.84083 * 17 16 14 19 19 C 1.50696 * 126.07041 * 180.17401 * 18 17 16 20 20 O 1.42901 * 109.47515 * 300.31090 * 19 18 17 21 21 Si 1.86305 * 109.47514 * 180.30846 * 19 18 17 22 22 C 1.35455 * 107.86537 * 0.41733 * 18 17 16 23 23 N 1.35530 * 108.87288 * 359.73949 * 22 18 17 24 24 C 1.52992 * 109.47278 * 60.00016 * 10 9 8 25 25 C 1.53000 * 109.47241 * 299.99973 * 6 4 3 26 26 H 1.09001 * 109.47194 * 299.99482 * 1 2 3 27 27 H 1.08992 * 109.47399 * 59.99654 * 1 2 3 28 28 H 1.09004 * 109.46724 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47398 * 120.00338 * 2 1 3 30 30 H 1.09001 * 109.47194 * 240.00518 * 2 1 3 31 31 H 1.08998 * 109.47295 * 300.00082 * 8 6 4 32 32 H 1.09004 * 109.47225 * 60.00231 * 8 6 4 33 33 H 1.09001 * 109.47296 * 59.99891 * 9 8 6 34 34 H 1.08998 * 109.47218 * 179.97438 * 9 8 6 35 35 H 1.09001 * 109.47293 * 294.99905 * 12 10 9 36 36 H 1.09000 * 109.47656 * 54.99726 * 12 10 9 37 37 H 0.97002 * 119.99553 * 0.02562 * 13 12 10 38 38 H 1.08002 * 126.45524 * 359.96059 * 17 16 14 39 39 H 1.09002 * 109.47069 * 60.30578 * 19 18 17 40 40 H 0.96706 * 113.99976 * 300.00140 * 20 19 18 41 41 H 1.48500 * 109.99657 * 58.68240 * 21 19 18 42 42 H 1.48497 * 109.99691 * 180.02562 * 21 19 18 43 43 H 1.07994 * 125.56492 * 179.69832 * 22 18 17 44 44 H 0.96998 * 125.68464 * 180.02562 * 23 22 18 45 45 H 1.09001 * 109.47605 * 59.99905 * 24 10 9 46 46 H 1.08998 * 109.47412 * 179.97438 * 24 10 9 47 47 H 1.09005 * 109.47326 * 300.00399 * 25 6 4 48 48 H 1.09003 * 109.46945 * 60.00367 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9206 2.9375 0.0012 7 1 3.5844 3.4694 0.8912 8 6 5.4485 2.8575 0.0010 9 6 6.0333 4.2713 0.0010 10 6 5.5616 5.0183 -1.2482 11 1 5.8975 4.4863 -2.1382 12 6 6.1469 6.4319 -1.2485 13 7 5.7940 7.1063 -2.5002 14 6 6.2042 8.3706 -2.7235 15 8 6.8674 8.9521 -1.8850 16 6 5.8504 9.0460 -3.9765 17 6 6.1950 10.3320 -4.3346 18 6 5.6563 10.5633 -5.6041 19 6 5.7803 11.8356 -6.4022 20 8 5.2075 12.9179 -5.6655 21 14 4.8810 11.6425 -8.0224 22 6 4.9986 9.4428 -5.9869 23 7 5.1090 8.5132 -5.0068 24 6 4.0338 5.0983 -1.2480 25 6 3.4495 3.6848 -1.2480 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 1.8934 -0.5139 0.8899 30 1 1.8934 -0.5138 -0.8900 31 1 5.7846 2.3249 0.8907 32 1 5.7845 2.3258 -0.8893 33 1 5.6974 4.8035 0.8910 34 1 7.1218 4.2143 0.0014 35 1 5.7415 6.9932 -0.4066 36 1 7.2318 6.3761 -1.1592 37 1 5.2645 6.6432 -3.1680 38 1 6.7737 11.0287 -3.7463 39 1 6.8331 12.0433 -6.5934 40 1 4.2700 12.8006 -5.4592 41 1 3.4510 11.3276 -7.7751 42 1 4.9964 12.8904 -8.8190 43 1 4.4716 9.3117 -6.9203 44 1 4.7291 7.6210 -5.0278 45 1 3.6978 5.6304 -0.3580 46 1 3.6977 5.6309 -2.1377 47 1 3.7857 3.1529 -2.1381 48 1 2.3610 3.7419 -1.2484 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_10543058.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:13:01 Heat of formation + Delta-G solvation = -128.215220 kcal Electronic energy + Delta-G solvation = -28705.685119 eV Core-core repulsion = 24534.067326 eV Total energy + Delta-G solvation = -4171.617793 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.49888 -41.79118 -40.48431 -39.41535 -37.75375 -37.63669 -35.98539 -33.35761 -32.68583 -32.23577 -31.96082 -30.71916 -27.92948 -26.38488 -24.92558 -24.04923 -23.80749 -22.99765 -21.74230 -21.25453 -20.98780 -20.68154 -19.99783 -18.69213 -17.70139 -17.64399 -17.53880 -17.09866 -16.78036 -16.67489 -16.22325 -15.86804 -15.64792 -15.45647 -15.20011 -15.05162 -14.80574 -14.72230 -14.51121 -14.39189 -13.96439 -13.81828 -13.79691 -13.61772 -13.48812 -13.43250 -13.13907 -12.92650 -12.65409 -12.41174 -12.40386 -12.31647 -11.98321 -11.81712 -11.69477 -11.54335 -11.36465 -11.24121 -11.12118 -10.51516 -10.24286 -9.95826 -9.32128 -4.96657 0.40323 1.17881 1.30464 1.54756 1.59565 1.61094 1.90629 2.00630 2.04554 2.37949 3.28700 3.36451 3.43295 3.49677 3.69060 3.75650 3.78466 3.87959 3.89682 3.93219 3.96635 4.01701 4.09567 4.15702 4.21671 4.24303 4.27501 4.35196 4.49365 4.53706 4.61061 4.66630 4.73957 4.74767 4.78350 4.82253 4.87330 4.90225 4.95200 4.95944 5.00820 5.04986 5.09242 5.20297 5.28729 5.45185 5.57539 5.78516 6.17912 6.38709 6.54354 6.73208 7.11656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.079 4.079 7 H 0.111 0.889 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.103 4.103 11 H 0.080 0.920 12 C 0.124 3.876 13 N -0.732 5.732 14 C 0.589 3.411 15 O -0.523 6.523 16 C -0.059 4.059 17 C -0.075 4.075 18 C -0.209 4.209 19 C -0.040 4.040 20 O -0.530 6.530 21 Si 0.682 3.318 22 C 0.036 3.964 23 N -0.536 5.536 24 C -0.114 4.114 25 C -0.110 4.110 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.076 0.924 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.393 0.607 38 H 0.150 0.850 39 H 0.115 0.885 40 H 0.374 0.626 41 H -0.260 1.260 42 H -0.258 1.258 43 H 0.176 0.824 44 H 0.417 0.583 45 H 0.073 0.927 46 H 0.066 0.934 47 H 0.069 0.931 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.264 -4.379 -3.415 7.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.393 6.393 6 C -0.099 4.099 7 H 0.129 0.871 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.122 4.122 11 H 0.099 0.901 12 C 0.001 3.999 13 N -0.384 5.384 14 C 0.377 3.623 15 O -0.399 6.399 16 C -0.171 4.171 17 C -0.102 4.102 18 C -0.216 4.216 19 C -0.151 4.151 20 O -0.336 6.336 21 Si 0.583 3.417 22 C -0.101 4.101 23 N -0.132 5.132 24 C -0.151 4.151 25 C -0.148 4.148 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.095 0.905 32 H 0.093 0.907 33 H 0.090 0.910 34 H 0.095 0.905 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.227 0.773 38 H 0.168 0.832 39 H 0.133 0.867 40 H 0.222 0.778 41 H -0.185 1.185 42 H -0.183 1.183 43 H 0.193 0.807 44 H 0.255 0.745 45 H 0.091 0.909 46 H 0.085 0.915 47 H 0.088 0.912 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.662 -3.923 -3.294 6.297 hybrid contribution -1.175 -0.523 0.558 1.402 sum -4.837 -4.446 -2.737 7.117 Atomic orbital electron populations 1.21819 0.92333 1.03275 1.03623 1.23076 0.95589 0.79907 1.02724 1.86505 1.24489 1.32699 1.83805 1.23796 0.80650 0.92704 0.72209 1.90688 1.60457 1.43189 1.44965 1.21152 0.96905 0.89653 1.02146 0.87144 1.21443 0.91371 0.97169 1.04119 1.21510 1.01230 0.94786 0.97354 1.21488 0.95738 0.94853 1.00094 0.90115 1.21461 1.00661 0.91825 0.85965 1.45884 1.56665 1.14598 1.21277 1.17036 0.79471 0.80904 0.84912 1.90887 1.38679 1.65229 1.45081 1.20428 1.08262 0.96548 0.91839 1.21226 1.00088 0.93489 0.95351 1.19850 1.06854 0.96850 0.98040 1.24332 1.04373 0.84276 1.02086 1.86609 1.28951 1.42994 1.75051 0.95475 0.80772 0.87115 0.78323 1.21866 1.04088 0.89597 0.94546 1.41921 1.41910 1.14664 1.14682 1.21611 0.94362 0.96194 1.02935 1.21520 1.01570 0.95603 0.96113 0.91365 0.91405 0.90005 0.91118 0.91156 0.90503 0.90744 0.90965 0.90531 0.90858 0.90824 0.77275 0.83182 0.86675 0.77845 1.18522 1.18314 0.80717 0.74505 0.90869 0.91518 0.91225 0.90204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.32 10.29 37.16 0.38 0.70 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.36 -0.36 10.12 -39.26 -0.40 -0.76 16 4 C 0.46 0.62 7.26 36.00 0.26 0.88 16 5 O -0.51 -2.22 15.73 -18.75 -0.29 -2.51 16 6 C -0.08 0.14 2.63 -91.77 -0.24 -0.10 16 7 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 8 C -0.10 0.18 4.49 -26.73 -0.12 0.06 16 9 C -0.11 0.34 5.20 -26.73 -0.14 0.20 16 10 C -0.10 0.38 2.22 -90.62 -0.20 0.18 16 11 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 12 C 0.12 -0.22 5.07 -4.04 -0.02 -0.24 16 13 N -0.73 1.28 5.28 -61.62 -0.33 0.95 16 14 C 0.59 1.16 7.79 -12.85 -0.10 1.06 16 15 O -0.52 -3.31 16.88 5.20 0.09 -3.22 16 16 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 17 C -0.08 -0.15 10.59 -39.12 -0.41 -0.57 16 18 C -0.21 0.01 5.44 -105.02 -0.57 -0.57 16 19 C -0.04 0.01 3.02 36.00 0.11 0.12 16 20 O -0.53 -0.95 12.88 -35.23 -0.45 -1.40 16 21 Si 0.68 -1.20 30.59 -169.99 -5.20 -6.40 16 22 C 0.04 -0.09 10.45 -16.91 -0.18 -0.26 16 23 N -0.54 1.50 5.99 -9.39 -0.06 1.45 16 24 C -0.11 0.46 5.08 -26.76 -0.14 0.33 16 25 C -0.11 0.35 5.13 -26.76 -0.14 0.21 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 30 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 31 H 0.08 -0.05 8.10 -51.93 -0.42 -0.48 16 32 H 0.07 -0.06 8.10 -51.93 -0.42 -0.48 16 33 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.39 -1.85 6.78 -40.82 -0.28 -2.13 16 38 H 0.15 0.48 8.06 -52.49 -0.42 0.06 16 39 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 40 H 0.37 -0.42 8.70 45.56 0.40 -0.03 16 41 H -0.26 0.04 7.11 56.52 0.40 0.44 16 42 H -0.26 -0.54 7.11 56.52 0.40 -0.13 16 43 H 0.18 -0.94 6.19 -52.49 -0.32 -1.26 16 44 H 0.42 -2.60 8.19 -40.82 -0.33 -2.93 16 45 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 46 H 0.07 -0.33 7.18 -51.93 -0.37 -0.70 16 47 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 48 H 0.08 -0.24 8.11 -51.93 -0.42 -0.66 16 LS Contribution 392.78 15.07 5.92 5.92 Total: 0.00 -10.55 392.78 -10.28 -20.83 By element: Atomic # 1 Polarization: -8.74 SS G_CDS: -7.70 Total: -16.45 kcal Atomic # 6 Polarization: 3.44 SS G_CDS: -1.85 Total: 1.59 kcal Atomic # 7 Polarization: 2.78 SS G_CDS: -0.38 Total: 2.40 kcal Atomic # 8 Polarization: -6.84 SS G_CDS: -1.06 Total: -7.89 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.20 Total: -6.40 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -10.55 -10.28 -20.83 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_10543058.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.385 kcal (2) G-P(sol) polarization free energy of solvation -10.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.937 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds