Wall clock time and date at job start Sun Mar 7 2021 07:13:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45203 * 109.46465 * 2 1 4 4 C 1.34233 * 116.99536 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99981 * 0.02562 * 4 3 2 6 6 C 1.50694 * 119.99714 * 179.97438 * 4 3 2 7 7 H 1.08997 * 109.47706 * 300.00434 * 6 4 3 8 8 C 1.52996 * 109.47048 * 60.00822 * 6 4 3 9 9 C 1.53009 * 109.47095 * 179.97438 * 8 6 4 10 10 C 1.52994 * 109.46797 * 299.99712 * 9 8 6 11 11 H 1.08999 * 109.47734 * 299.99556 * 10 9 8 12 12 C 1.53009 * 109.46797 * 179.97438 * 10 9 8 13 13 N 1.46501 * 109.46960 * 65.00126 * 12 10 9 14 14 C 1.34779 * 119.99773 * 179.72184 * 13 12 10 15 15 O 1.21694 * 119.99653 * 354.51824 * 14 13 12 16 16 C 1.46670 * 119.99996 * 174.50913 * 14 13 12 17 17 C 1.37874 * 126.23222 * 4.68343 * 16 14 13 18 18 C 1.39835 * 107.08681 * 179.84354 * 17 16 14 19 19 C 1.50702 * 126.06910 * 180.15941 * 18 17 16 20 20 O 1.42894 * 109.47165 * 120.30847 * 19 18 17 21 21 Si 1.86291 * 109.47270 * 0.30257 * 19 18 17 22 22 C 1.35454 * 107.86210 * 0.41788 * 18 17 16 23 23 N 1.35532 * 108.87147 * 359.74244 * 22 18 17 24 24 C 1.46498 * 125.67817 * 179.97438 * 23 22 18 25 25 C 1.52999 * 109.47559 * 60.00400 * 10 9 8 26 26 C 1.53007 * 109.46755 * 180.02562 * 6 4 3 27 27 H 1.08997 * 109.47362 * 60.00175 * 1 2 3 28 28 H 1.09006 * 109.46659 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47483 * 299.99556 * 1 2 3 30 30 H 1.08992 * 109.47247 * 240.00033 * 2 1 3 31 31 H 1.09002 * 109.46862 * 119.99320 * 2 1 3 32 32 H 1.08996 * 109.46873 * 299.99315 * 8 6 4 33 33 H 1.08997 * 109.47676 * 59.99485 * 8 6 4 34 34 H 1.09000 * 109.46649 * 179.97438 * 9 8 6 35 35 H 1.08999 * 109.46616 * 59.99952 * 9 8 6 36 36 H 1.08997 * 109.47107 * 304.99951 * 12 10 9 37 37 H 1.09005 * 109.46637 * 185.00009 * 12 10 9 38 38 H 0.96998 * 120.00095 * 0.02562 * 13 12 10 39 39 H 1.07999 * 126.45847 * 359.97438 * 17 16 14 40 40 H 1.09003 * 109.46583 * 240.30579 * 19 18 17 41 41 H 0.96699 * 114.00218 * 299.99945 * 20 19 18 42 42 H 1.48507 * 109.99738 * 58.68413 * 21 19 18 43 43 H 1.48497 * 109.99968 * 179.97438 * 21 19 18 44 44 H 1.08001 * 125.56538 * 179.75827 * 22 18 17 45 45 H 1.09006 * 109.46904 * 264.34792 * 24 23 22 46 46 H 1.09000 * 109.47422 * 24.34212 * 24 23 22 47 47 H 1.08998 * 109.47668 * 144.34840 * 24 23 22 48 48 H 1.08999 * 109.47287 * 59.98882 * 25 10 9 49 49 H 1.08996 * 109.47370 * 180.02562 * 25 10 9 50 50 H 1.08997 * 109.46835 * 60.00427 * 26 6 4 51 51 H 1.08997 * 109.46923 * 299.99874 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3446 1.5450 0.0005 5 8 4.0807 0.5868 0.0005 6 6 3.9205 2.9375 0.0000 7 1 3.5849 3.4692 -0.8904 8 6 3.4484 3.6851 1.2486 9 6 4.0337 5.0988 1.2484 10 6 5.5615 5.0183 1.2494 11 1 5.8968 4.4865 2.1398 12 6 6.1467 6.4320 1.2485 13 7 5.7934 7.1075 2.4996 14 6 6.2087 8.3699 2.7243 15 8 6.9589 8.9132 1.9351 16 6 5.7562 9.0888 3.9200 17 6 4.9845 8.5715 4.9387 18 6 4.7945 9.5960 5.8712 19 6 4.0144 9.4926 7.1564 20 8 4.8749 9.7801 8.2604 21 14 3.3335 7.7675 7.3325 22 6 5.4314 10.6996 5.4114 23 7 6.0196 10.4046 4.2266 24 6 6.8047 11.3319 3.4082 25 6 6.0337 4.2707 0.0007 26 6 5.4485 2.8575 0.0001 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5137 0.8900 30 1 1.8933 -0.5138 -0.8899 31 1 1.8933 -0.5137 0.8901 32 1 2.3600 3.7421 1.2481 33 1 3.7840 3.1535 2.1390 34 1 3.6969 5.6315 2.1378 35 1 3.6983 5.6306 0.3580 36 1 5.7416 6.9924 0.4060 37 1 7.2317 6.3760 1.1596 38 1 5.2644 6.6447 3.1680 39 1 4.6009 7.5641 5.0051 40 1 3.1920 10.2079 7.1407 41 1 5.6306 9.1816 8.3364 42 1 4.4429 6.7803 7.3231 43 1 2.5626 7.6524 8.5964 44 1 5.4651 11.6580 5.9081 45 1 6.1648 11.7733 2.6441 46 1 7.2114 12.1205 4.0413 47 1 7.6220 10.7920 2.9300 48 1 5.6983 4.8025 -0.8897 49 1 7.1221 4.2129 0.0017 50 1 5.7844 2.3251 -0.8896 51 1 5.7843 2.3258 0.8903 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_10803934.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:13:04 Heat of formation + Delta-G solvation = -123.955269 kcal Electronic energy + Delta-G solvation = -31184.765824 eV Core-core repulsion = 26857.795138 eV Total energy + Delta-G solvation = -4326.970687 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.54131 -41.73308 -40.43675 -39.35927 -37.81662 -37.57388 -35.97443 -34.09080 -33.16457 -32.38728 -31.90016 -30.67545 -28.55594 -27.54201 -25.71182 -24.82356 -23.94532 -23.63973 -22.85827 -21.67498 -21.14273 -20.88814 -20.53077 -19.07066 -18.63327 -17.59143 -17.55164 -17.39793 -17.05041 -16.84861 -16.64135 -16.31564 -15.86093 -15.61015 -15.39356 -15.29697 -15.11315 -14.99439 -14.84595 -14.58594 -14.45265 -13.96255 -13.89092 -13.79386 -13.72731 -13.57619 -13.39941 -13.24952 -13.13563 -13.06325 -12.87175 -12.60337 -12.34195 -12.27296 -12.24540 -11.91828 -11.79130 -11.61822 -11.49047 -11.27629 -11.16771 -10.95734 -10.52591 -10.16357 -9.75363 -9.21566 -4.90530 0.44827 1.23523 1.35148 1.54069 1.60494 1.66680 1.70053 2.03603 2.32122 2.36194 3.35690 3.43873 3.47360 3.51606 3.66716 3.79161 3.82090 3.85053 3.94508 3.98643 4.00608 4.03538 4.15059 4.17686 4.23193 4.27643 4.28178 4.30008 4.32751 4.35273 4.54212 4.61041 4.63957 4.66974 4.69683 4.71698 4.74409 4.79503 4.84585 4.91783 4.95625 5.00578 5.01890 5.06705 5.09596 5.16387 5.27828 5.37071 5.50498 5.66099 5.90803 6.13510 6.43434 6.51586 6.78704 7.16302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.111 4.111 9 C -0.115 4.115 10 C -0.104 4.104 11 H 0.082 0.918 12 C 0.127 3.873 13 N -0.719 5.719 14 C 0.590 3.410 15 O -0.546 6.546 16 C -0.049 4.049 17 C -0.135 4.135 18 C -0.209 4.209 19 C -0.040 4.040 20 O -0.535 6.535 21 Si 0.689 3.311 22 C 0.050 3.950 23 N -0.407 5.407 24 C 0.065 3.935 25 C -0.110 4.110 26 C -0.104 4.104 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.080 0.920 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.403 0.597 39 H 0.147 0.853 40 H 0.113 0.887 41 H 0.375 0.625 42 H -0.260 1.260 43 H -0.261 1.261 44 H 0.172 0.828 45 H 0.079 0.921 46 H 0.086 0.914 47 H 0.102 0.898 48 H 0.071 0.929 49 H 0.075 0.925 50 H 0.075 0.925 51 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.579 0.087 -1.189 3.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.152 4.152 10 C -0.122 4.122 11 H 0.100 0.900 12 C 0.003 3.997 13 N -0.371 5.371 14 C 0.378 3.622 15 O -0.425 6.425 16 C -0.162 4.162 17 C -0.162 4.162 18 C -0.215 4.215 19 C -0.151 4.151 20 O -0.341 6.341 21 Si 0.590 3.410 22 C -0.087 4.087 23 N -0.078 5.078 24 C -0.076 4.076 25 C -0.148 4.148 26 C -0.141 4.141 27 H 0.086 0.914 28 H 0.099 0.901 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.099 0.901 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.238 0.762 39 H 0.165 0.835 40 H 0.131 0.869 41 H 0.222 0.778 42 H -0.185 1.185 43 H -0.186 1.186 44 H 0.189 0.811 45 H 0.098 0.902 46 H 0.104 0.896 47 H 0.120 0.880 48 H 0.090 0.910 49 H 0.093 0.907 50 H 0.094 0.906 51 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -3.081 0.124 -1.469 3.416 hybrid contribution 0.861 -0.187 0.768 1.168 sum -2.220 -0.063 -0.701 2.329 Atomic orbital electron populations 1.21819 0.92344 1.03239 1.03648 1.23069 0.95584 0.79951 1.02687 1.86508 1.24491 1.32637 1.83802 1.23817 0.80640 0.92728 0.72163 1.90688 1.60473 1.43217 1.45023 1.21155 0.96831 0.89622 1.02248 0.87182 1.21535 1.01641 0.95652 0.96015 1.21636 0.94170 0.96209 1.03198 1.21496 0.95941 0.94743 1.00065 0.89980 1.21451 1.00590 0.91885 0.85743 1.45632 1.56216 1.14029 1.21216 1.16944 0.79947 0.81447 0.83858 1.90815 1.35890 1.67874 1.47942 1.19930 1.10275 0.86184 0.99815 1.21157 1.01423 0.99231 0.94353 1.19718 1.07932 0.94277 0.99537 1.24315 0.94930 1.12953 0.82907 1.86575 1.40819 1.58086 1.48611 0.95123 0.84276 0.74759 0.86836 1.21916 0.99281 1.00507 0.87009 1.43918 1.38106 1.08849 1.16958 1.22324 0.96840 0.92957 0.95447 1.21499 1.01120 0.94820 0.97395 1.21435 0.91459 0.97165 1.04059 0.91379 0.90062 0.91346 0.91179 0.91162 0.90091 0.91164 0.90962 0.90926 0.90970 0.90966 0.76159 0.83545 0.86945 0.77760 1.18470 1.18615 0.81059 0.90236 0.89566 0.87977 0.91033 0.90662 0.90606 0.90747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.39 10.12 -39.27 -0.40 -0.79 16 4 C 0.46 0.68 7.25 36.00 0.26 0.94 16 5 O -0.51 -2.31 15.73 -18.75 -0.29 -2.61 16 6 C -0.08 0.13 2.63 -91.77 -0.24 -0.11 16 7 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 8 C -0.11 0.34 5.14 -26.73 -0.14 0.20 16 9 C -0.11 0.46 5.08 -26.73 -0.14 0.32 16 10 C -0.10 0.36 2.23 -90.62 -0.20 0.16 16 11 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 12 C 0.13 -0.23 5.07 -4.04 -0.02 -0.25 16 13 N -0.72 0.93 5.27 -61.61 -0.32 0.61 16 14 C 0.59 1.10 7.77 -12.86 -0.10 1.00 16 15 O -0.55 -2.72 14.78 5.19 0.08 -2.65 16 16 C -0.05 -0.06 6.89 -81.98 -0.56 -0.63 16 17 C -0.14 0.06 8.84 -39.12 -0.35 -0.29 16 18 C -0.21 0.00 5.41 -105.02 -0.57 -0.57 16 19 C -0.04 0.02 3.00 36.01 0.11 0.13 16 20 O -0.53 -0.60 12.87 -35.23 -0.45 -1.05 16 21 Si 0.69 -0.88 30.64 -169.99 -5.21 -6.09 16 22 C 0.05 0.01 11.27 -16.91 -0.19 -0.18 16 23 N -0.41 -0.39 3.16 -120.24 -0.38 -0.77 16 24 C 0.07 -0.03 10.48 59.85 0.63 0.59 16 25 C -0.11 0.33 5.20 -26.75 -0.14 0.20 16 26 C -0.10 0.16 4.49 -26.75 -0.12 0.04 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 31 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 32 H 0.08 -0.24 8.11 -51.93 -0.42 -0.66 16 33 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.07 -0.34 7.18 -51.93 -0.37 -0.72 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.40 -1.44 6.56 -40.82 -0.27 -1.71 16 39 H 0.15 -0.44 5.77 -52.49 -0.30 -0.75 16 40 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 41 H 0.37 -0.53 8.70 45.56 0.40 -0.13 16 42 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 43 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 44 H 0.17 -0.26 8.06 -52.49 -0.42 -0.68 16 45 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 46 H 0.09 -0.23 8.12 -51.93 -0.42 -0.65 16 47 H 0.10 0.11 6.55 -51.93 -0.34 -0.23 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 50 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 51 H 0.07 -0.04 8.10 -51.93 -0.42 -0.46 16 LS Contribution 411.19 15.07 6.20 6.20 Total: 0.00 -9.28 411.19 -10.46 -19.75 By element: Atomic # 1 Polarization: -6.54 SS G_CDS: -8.52 Total: -15.07 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: -1.16 Total: 2.47 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.70 Total: -0.17 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.07 Total: -7.09 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.21 Total: -6.09 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.28 -10.46 -19.75 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_10803934.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.208 kcal (2) G-P(sol) polarization free energy of solvation -9.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.747 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds