Wall clock time and date at job start Sun Mar 7 2021 07:13:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45205 * 109.47038 * 2 1 4 4 C 1.34225 * 116.99943 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00047 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99990 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.47304 * 299.99904 * 6 4 3 8 8 C 1.52999 * 109.46824 * 60.00712 * 6 4 3 9 9 C 1.52997 * 109.46991 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47131 * 299.99311 * 9 8 6 11 11 H 1.08996 * 109.47452 * 300.00000 * 10 9 8 12 12 C 1.52997 * 109.47131 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.47170 * 65.00316 * 12 10 9 14 14 C 1.34777 * 120.00168 * 179.97438 * 13 12 10 15 15 O 1.21570 * 119.99972 * 0.02562 * 14 13 12 16 16 C 1.47697 * 120.00163 * 180.02562 * 14 13 12 17 17 C 1.39819 * 120.16809 * 180.02562 * 16 14 13 18 18 F 1.35100 * 120.11128 * 0.02562 * 17 16 14 19 19 C 1.38323 * 119.78207 * 179.97438 * 17 16 14 20 20 C 1.38207 * 120.11296 * 0.02562 * 19 17 16 21 21 C 1.38460 * 120.34177 * 359.97438 * 20 19 17 22 22 C 1.50698 * 119.89238 * 180.02562 * 21 20 19 23 23 O 1.42899 * 109.47149 * 245.00155 * 22 21 20 24 24 Si 1.86299 * 109.47103 * 5.00178 * 22 21 20 25 25 C 1.37856 * 120.21480 * 359.72230 * 21 20 19 26 26 C 1.53002 * 109.46972 * 60.00459 * 10 9 8 27 27 C 1.52997 * 109.46817 * 299.99733 * 26 10 9 28 28 H 1.08999 * 109.47398 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47413 * 299.99806 * 1 2 3 30 30 H 1.08996 * 109.47599 * 59.99878 * 1 2 3 31 31 H 1.09004 * 109.46731 * 240.00228 * 2 1 3 32 32 H 1.08993 * 109.47109 * 120.00089 * 2 1 3 33 33 H 1.09002 * 109.46719 * 299.99679 * 8 6 4 34 34 H 1.08993 * 109.47839 * 59.99520 * 8 6 4 35 35 H 1.09001 * 109.47289 * 179.97438 * 9 8 6 36 36 H 1.09000 * 109.47611 * 59.99933 * 9 8 6 37 37 H 1.09000 * 109.47325 * 185.00280 * 12 10 9 38 38 H 1.09006 * 109.47500 * 305.00368 * 12 10 9 39 39 H 0.97004 * 120.00188 * 359.97438 * 13 12 10 40 40 H 1.07995 * 119.94558 * 180.02562 * 19 17 16 41 41 H 1.07995 * 119.82914 * 180.02562 * 20 19 17 42 42 H 1.08997 * 109.47130 * 124.99589 * 22 21 20 43 43 H 0.96698 * 113.99987 * 60.00191 * 23 22 21 44 44 H 1.48499 * 110.00459 * 180.02562 * 24 22 21 45 45 H 1.48507 * 109.99957 * 301.31933 * 24 22 21 46 46 H 1.08009 * 120.06041 * 180.29952 * 25 21 20 47 47 H 1.09002 * 109.47070 * 179.97438 * 26 10 9 48 48 H 1.08996 * 109.47407 * 59.99513 * 26 10 9 49 49 H 1.09001 * 109.47502 * 300.00518 * 27 26 10 50 50 H 1.09001 * 109.47289 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0000 7 1 3.5852 3.4691 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0339 5.0986 1.2485 10 6 5.5617 5.0180 1.2496 11 1 5.8969 4.4862 2.1400 12 6 6.1470 6.4316 1.2487 13 7 5.7937 7.1072 2.4997 14 6 6.2047 8.3713 2.7224 15 8 6.8682 8.9511 1.8848 16 6 5.8490 9.0522 3.9838 17 6 6.2731 10.3638 4.2182 18 9 7.0098 11.0138 3.2909 19 6 5.9349 10.9940 5.4021 20 6 5.1808 10.3293 6.3506 21 6 4.7582 9.0305 6.1237 22 6 3.9359 8.3155 7.1646 23 8 4.6763 7.2059 7.6770 24 14 3.5359 9.4900 8.5543 25 6 5.0820 8.3914 4.9459 26 6 6.0339 4.2705 0.0009 27 6 5.4486 2.8568 0.0011 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 1.8933 -0.5138 -0.8901 32 1 1.8933 -0.5138 0.8899 33 1 2.3601 3.7420 1.2481 34 1 3.7841 3.1534 2.1391 35 1 3.6972 5.6314 2.1378 36 1 3.6987 5.6306 0.3581 37 1 7.2319 6.3757 1.1599 38 1 5.7419 6.9922 0.4062 39 1 5.2639 6.6447 3.1679 40 1 6.2607 12.0071 5.5857 41 1 4.9190 10.8259 7.2732 42 1 3.0103 7.9577 6.7136 43 1 5.5138 7.4506 8.0937 44 1 2.7256 8.7969 9.5879 45 1 4.7898 10.0097 9.1569 46 1 4.7470 7.3799 4.7694 47 1 7.1224 4.2134 0.0014 48 1 5.6987 4.8023 -0.8895 49 1 5.7837 2.3249 0.8915 50 1 5.7853 2.3240 -0.8882 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_12335834.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:13:25 Heat of formation + Delta-G solvation = -187.575841 kcal Electronic energy + Delta-G solvation = -32957.276523 eV Core-core repulsion = 28250.830456 eV Total energy + Delta-G solvation = -4706.446068 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.172 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -49.86238 -41.77014 -41.31520 -40.17933 -39.39036 -37.72953 -37.57898 -35.94511 -33.53001 -32.77383 -32.44060 -32.01698 -31.81976 -27.82264 -26.76338 -25.49396 -24.58417 -23.93165 -23.45716 -22.76326 -21.70171 -21.48328 -20.82810 -19.35931 -18.64312 -18.42836 -18.32193 -17.60480 -17.59138 -17.42094 -16.91470 -16.66653 -16.40959 -16.28288 -16.04636 -15.78894 -15.68864 -15.35284 -15.08654 -14.99916 -14.85325 -14.60998 -14.46473 -14.37412 -13.93898 -13.81882 -13.66472 -13.59441 -13.41214 -13.25336 -13.07311 -12.89315 -12.87860 -12.61232 -12.41022 -12.34950 -12.25767 -11.93122 -11.83597 -11.63393 -11.49955 -11.29722 -11.18701 -11.06874 -10.72931 -10.44012 -10.12771 -9.87781 -5.11454 -0.52829 -0.12810 1.09231 1.22676 1.43132 1.65253 1.65857 1.82487 1.99065 2.47025 3.00022 3.14358 3.33056 3.34831 3.39712 3.43107 3.49977 3.51620 3.77830 3.83775 3.85227 3.93626 3.96299 3.98779 4.02402 4.15356 4.21726 4.27248 4.28271 4.28966 4.33749 4.42988 4.54379 4.59477 4.63121 4.66530 4.70285 4.77494 4.78622 4.83314 4.84121 4.89683 4.94512 4.99653 5.00187 5.02262 5.05794 5.14991 5.26187 5.35293 5.49636 5.51559 6.20708 6.35299 6.77879 7.12462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.079 4.079 7 H 0.111 0.889 8 C -0.111 4.111 9 C -0.114 4.114 10 C -0.103 4.103 11 H 0.081 0.919 12 C 0.124 3.876 13 N -0.724 5.724 14 C 0.558 3.442 15 O -0.520 6.520 16 C -0.175 4.175 17 C 0.167 3.833 18 F -0.111 7.111 19 C -0.156 4.156 20 C -0.062 4.062 21 C -0.138 4.138 22 C -0.073 4.073 23 O -0.528 6.528 24 Si 0.686 3.314 25 C -0.031 4.031 26 C -0.111 4.111 27 C -0.103 4.103 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.080 0.920 34 H 0.069 0.931 35 H 0.068 0.932 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.400 0.600 40 H 0.150 0.850 41 H 0.142 0.858 42 H 0.123 0.877 43 H 0.378 0.622 44 H -0.254 1.254 45 H -0.258 1.258 46 H 0.138 0.862 47 H 0.075 0.925 48 H 0.071 0.929 49 H 0.074 0.926 50 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.184 0.917 2.861 5.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.152 4.152 10 C -0.122 4.122 11 H 0.100 0.900 12 C 0.001 3.999 13 N -0.377 5.377 14 C 0.344 3.656 15 O -0.396 6.396 16 C -0.179 4.179 17 C 0.147 3.853 18 F -0.089 7.089 19 C -0.175 4.175 20 C -0.080 4.080 21 C -0.139 4.139 22 C -0.183 4.183 23 O -0.334 6.334 24 Si 0.587 3.413 25 C -0.050 4.050 26 C -0.148 4.148 27 C -0.141 4.141 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.086 0.914 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.098 0.902 34 H 0.088 0.912 35 H 0.087 0.913 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.236 0.764 40 H 0.167 0.833 41 H 0.159 0.841 42 H 0.140 0.860 43 H 0.226 0.774 44 H -0.179 1.179 45 H -0.183 1.183 46 H 0.156 0.844 47 H 0.094 0.906 48 H 0.090 0.910 49 H 0.093 0.907 50 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -4.905 0.860 2.809 5.718 hybrid contribution 0.895 -0.998 0.257 1.365 sum -4.011 -0.139 3.066 5.050 Atomic orbital electron populations 1.21817 0.92346 1.03249 1.03634 1.23070 0.95581 0.79941 1.02702 1.86506 1.24495 1.32659 1.83804 1.23807 0.80641 0.92718 0.72178 1.90687 1.60468 1.43197 1.45001 1.21154 0.96864 0.89633 1.02189 0.87153 1.21529 1.01585 0.95630 0.96075 1.21625 0.94277 0.96214 1.03034 1.21492 0.95838 0.94790 1.00095 0.90033 1.21469 1.00599 0.91871 0.85999 1.45882 1.56219 1.14331 1.21314 1.17958 0.79964 0.81642 0.86025 1.90880 1.37881 1.65097 1.45768 1.20083 1.05546 0.94836 0.97397 1.17762 0.91114 0.89430 0.87021 1.91633 1.73166 1.80173 1.63878 1.21174 1.01597 1.02065 0.92685 1.21147 0.94502 0.93563 0.98750 1.20259 1.01798 0.95067 0.96785 1.25014 0.96642 0.95337 1.01300 1.86618 1.37403 1.31686 1.77740 0.94963 0.84205 0.83398 0.78763 1.21023 0.93545 0.99216 0.91195 1.21508 1.01167 0.94799 0.97373 1.21442 0.91415 0.97161 1.04087 0.90039 0.91380 0.91372 0.91150 0.91163 0.90158 0.91191 0.91289 0.90885 0.90917 0.90846 0.76424 0.83262 0.84062 0.85954 0.77417 1.17882 1.18254 0.84427 0.90606 0.90987 0.90743 0.90553 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.50 10.12 -39.24 -0.40 -0.90 16 4 C 0.46 0.83 7.25 36.00 0.26 1.09 16 5 O -0.51 -2.45 15.73 -18.75 -0.29 -2.74 16 6 C -0.08 0.10 2.63 -91.77 -0.24 -0.14 16 7 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 8 C -0.11 0.28 5.13 -26.73 -0.14 0.14 16 9 C -0.11 0.39 5.08 -26.73 -0.14 0.25 16 10 C -0.10 0.30 2.23 -90.62 -0.20 0.10 16 11 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 12 C 0.12 -0.13 5.06 -4.04 -0.02 -0.15 16 13 N -0.72 0.57 5.23 -61.30 -0.32 0.25 16 14 C 0.56 1.46 7.77 -12.40 -0.10 1.37 16 15 O -0.52 -3.58 15.34 5.30 0.08 -3.50 16 16 C -0.17 -0.17 5.88 -104.91 -0.62 -0.79 16 17 C 0.17 0.29 7.29 -38.96 -0.28 0.01 16 18 F -0.11 -0.52 15.55 2.25 0.04 -0.48 16 19 C -0.16 0.17 10.01 -39.56 -0.40 -0.22 16 20 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 21 C -0.14 0.33 5.34 -104.68 -0.56 -0.23 16 22 C -0.07 0.21 2.80 36.00 0.10 0.31 16 23 O -0.53 0.72 12.83 -35.23 -0.45 0.27 16 24 Si 0.69 -2.15 29.87 -169.99 -5.08 -7.23 16 25 C -0.03 0.05 9.17 -39.19 -0.36 -0.31 16 26 C -0.11 0.28 5.20 -26.73 -0.14 0.14 16 27 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 33 H 0.08 -0.20 8.11 -51.93 -0.42 -0.62 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.28 7.18 -51.93 -0.37 -0.65 16 36 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 38 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.40 -1.32 5.69 -40.82 -0.23 -1.55 16 40 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 41 H 0.14 -0.65 4.82 -52.49 -0.25 -0.90 16 42 H 0.12 -0.48 7.96 -51.93 -0.41 -0.89 16 43 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 44 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 45 H -0.26 0.33 7.00 56.52 0.40 0.73 16 46 H 0.14 -0.50 6.41 -52.48 -0.34 -0.84 16 47 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 48 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 49 H 0.07 -0.01 8.10 -51.93 -0.42 -0.44 16 50 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 408.22 15.07 6.15 6.15 Total: 0.00 -9.82 408.22 -10.55 -20.37 By element: Atomic # 1 Polarization: -6.87 SS G_CDS: -7.59 Total: -14.47 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: -2.68 Total: 2.28 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.32 Total: 0.25 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -1.06 Total: -6.87 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.48 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: -5.08 Total: -7.23 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -9.82 -10.55 -20.37 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_12335834.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.206 kcal (2) G-P(sol) polarization free energy of solvation -9.824 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.369 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds