Wall clock time and date at job start Sun Mar 7 2021 07:13:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45205 * 109.47038 * 2 1 4 4 C 1.34225 * 116.99943 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00047 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99990 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.47304 * 299.99904 * 6 4 3 8 8 C 1.52999 * 109.46824 * 60.00712 * 6 4 3 9 9 C 1.52997 * 109.46991 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47131 * 299.99311 * 9 8 6 11 11 H 1.08996 * 109.47452 * 300.00000 * 10 9 8 12 12 C 1.52997 * 109.47131 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.47170 * 65.00316 * 12 10 9 14 14 C 1.34777 * 120.00168 * 179.97438 * 13 12 10 15 15 O 1.21570 * 119.99972 * 0.02562 * 14 13 12 16 16 C 1.47697 * 120.00163 * 180.02562 * 14 13 12 17 17 C 1.39819 * 120.16809 * 180.02562 * 16 14 13 18 18 F 1.35100 * 120.11128 * 0.02562 * 17 16 14 19 19 C 1.38323 * 119.78207 * 179.97438 * 17 16 14 20 20 C 1.38207 * 120.11296 * 0.02562 * 19 17 16 21 21 C 1.38460 * 120.34177 * 359.97438 * 20 19 17 22 22 C 1.50698 * 119.89238 * 180.02562 * 21 20 19 23 23 O 1.42899 * 109.47149 * 245.00155 * 22 21 20 24 24 Si 1.86299 * 109.47103 * 5.00178 * 22 21 20 25 25 C 1.37856 * 120.21480 * 359.72230 * 21 20 19 26 26 C 1.53002 * 109.46972 * 60.00459 * 10 9 8 27 27 C 1.52997 * 109.46817 * 299.99733 * 26 10 9 28 28 H 1.08999 * 109.47398 * 179.97438 * 1 2 3 29 29 H 1.08998 * 109.47413 * 299.99806 * 1 2 3 30 30 H 1.08996 * 109.47599 * 59.99878 * 1 2 3 31 31 H 1.09004 * 109.46731 * 240.00228 * 2 1 3 32 32 H 1.08993 * 109.47109 * 120.00089 * 2 1 3 33 33 H 1.09002 * 109.46719 * 299.99679 * 8 6 4 34 34 H 1.08993 * 109.47839 * 59.99520 * 8 6 4 35 35 H 1.09001 * 109.47289 * 179.97438 * 9 8 6 36 36 H 1.09000 * 109.47611 * 59.99933 * 9 8 6 37 37 H 1.09000 * 109.47325 * 185.00280 * 12 10 9 38 38 H 1.09006 * 109.47500 * 305.00368 * 12 10 9 39 39 H 0.97004 * 120.00188 * 359.97438 * 13 12 10 40 40 H 1.07995 * 119.94558 * 180.02562 * 19 17 16 41 41 H 1.07995 * 119.82914 * 180.02562 * 20 19 17 42 42 H 1.08997 * 109.47130 * 124.99589 * 22 21 20 43 43 H 0.96698 * 113.99987 * 60.00191 * 23 22 21 44 44 H 1.48499 * 110.00459 * 180.02562 * 24 22 21 45 45 H 1.48507 * 109.99957 * 301.31933 * 24 22 21 46 46 H 1.08009 * 120.06041 * 180.29952 * 25 21 20 47 47 H 1.09002 * 109.47070 * 179.97438 * 26 10 9 48 48 H 1.08996 * 109.47407 * 59.99513 * 26 10 9 49 49 H 1.09001 * 109.47502 * 300.00518 * 27 26 10 50 50 H 1.09001 * 109.47289 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0000 7 1 3.5852 3.4691 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0339 5.0986 1.2485 10 6 5.5617 5.0180 1.2496 11 1 5.8969 4.4862 2.1400 12 6 6.1470 6.4316 1.2487 13 7 5.7937 7.1072 2.4997 14 6 6.2047 8.3713 2.7224 15 8 6.8682 8.9511 1.8848 16 6 5.8490 9.0522 3.9838 17 6 6.2731 10.3638 4.2182 18 9 7.0098 11.0138 3.2909 19 6 5.9349 10.9940 5.4021 20 6 5.1808 10.3293 6.3506 21 6 4.7582 9.0305 6.1237 22 6 3.9359 8.3155 7.1646 23 8 4.6763 7.2059 7.6770 24 14 3.5359 9.4900 8.5543 25 6 5.0820 8.3914 4.9459 26 6 6.0339 4.2705 0.0009 27 6 5.4486 2.8568 0.0011 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 1.8933 -0.5138 -0.8901 32 1 1.8933 -0.5138 0.8899 33 1 2.3601 3.7420 1.2481 34 1 3.7841 3.1534 2.1391 35 1 3.6972 5.6314 2.1378 36 1 3.6987 5.6306 0.3581 37 1 7.2319 6.3757 1.1599 38 1 5.7419 6.9922 0.4062 39 1 5.2639 6.6447 3.1679 40 1 6.2607 12.0071 5.5857 41 1 4.9190 10.8259 7.2732 42 1 3.0103 7.9577 6.7136 43 1 5.5138 7.4506 8.0937 44 1 2.7256 8.7969 9.5879 45 1 4.7898 10.0097 9.1569 46 1 4.7470 7.3799 4.7694 47 1 7.1224 4.2134 0.0014 48 1 5.6987 4.8023 -0.8895 49 1 5.7837 2.3249 0.8915 50 1 5.7853 2.3240 -0.8882 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_12335834.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:13:23 Heat of formation + Delta-G solvation = -185.667205 kcal Electronic energy + Delta-G solvation = -32957.193759 eV Core-core repulsion = 28250.830456 eV Total energy + Delta-G solvation = -4706.363303 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.172 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -50.00623 -41.85037 -41.35321 -40.11604 -39.37941 -37.74495 -37.56489 -36.03325 -33.50731 -32.72201 -32.33765 -31.90419 -31.69177 -27.79147 -26.61174 -25.45755 -24.53271 -23.76959 -23.40233 -22.72288 -21.68953 -21.49140 -20.72567 -19.31369 -18.73835 -18.35787 -18.31387 -17.68118 -17.61075 -17.40703 -16.99623 -16.72704 -16.35621 -16.18610 -15.93955 -15.79158 -15.63205 -15.27578 -15.05309 -14.89151 -14.73014 -14.64181 -14.47309 -14.36932 -13.89477 -13.71396 -13.57258 -13.53021 -13.26113 -13.18060 -13.00473 -12.89897 -12.83036 -12.56840 -12.28260 -12.25723 -12.11709 -11.88692 -11.70815 -11.58755 -11.46310 -11.31177 -11.14443 -11.08272 -10.61146 -10.42621 -10.11845 -9.83226 -4.86976 -0.48750 -0.02165 1.10018 1.32523 1.61725 1.63677 1.63877 1.97737 2.03029 2.48583 3.05884 3.34763 3.41081 3.47980 3.54370 3.57748 3.63675 3.65549 3.84562 3.94647 3.96916 4.00759 4.03157 4.09741 4.15836 4.27043 4.31135 4.37834 4.43929 4.47678 4.49969 4.62527 4.63946 4.70812 4.78921 4.80595 4.83236 4.87158 4.88239 4.95300 4.96085 5.07485 5.10236 5.12072 5.14847 5.16298 5.21138 5.27680 5.33792 5.43574 5.49445 5.60566 6.36235 6.51010 6.65961 7.05524 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.359 6.359 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.126 0.874 8 C -0.104 4.104 9 C -0.110 4.110 10 C -0.092 4.092 11 H 0.087 0.913 12 C 0.125 3.875 13 N -0.707 5.707 14 C 0.552 3.448 15 O -0.574 6.574 16 C -0.188 4.188 17 C 0.133 3.867 18 F -0.137 7.137 19 C -0.153 4.153 20 C -0.053 4.053 21 C -0.130 4.130 22 C -0.074 4.074 23 O -0.544 6.544 24 Si 0.760 3.240 25 C -0.023 4.023 26 C -0.107 4.107 27 C -0.099 4.099 28 H 0.094 0.906 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.065 0.935 32 H 0.066 0.934 33 H 0.085 0.915 34 H 0.067 0.933 35 H 0.082 0.918 36 H 0.075 0.925 37 H 0.059 0.941 38 H 0.066 0.934 39 H 0.414 0.586 40 H 0.165 0.835 41 H 0.165 0.835 42 H 0.139 0.861 43 H 0.388 0.612 44 H -0.306 1.306 45 H -0.278 1.278 46 H 0.160 0.840 47 H 0.074 0.926 48 H 0.078 0.922 49 H 0.063 0.937 50 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.713 1.097 4.050 7.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.144 0.856 8 C -0.142 4.142 9 C -0.147 4.147 10 C -0.111 4.111 11 H 0.105 0.895 12 C 0.002 3.998 13 N -0.360 5.360 14 C 0.340 3.660 15 O -0.454 6.454 16 C -0.192 4.192 17 C 0.113 3.887 18 F -0.116 7.116 19 C -0.171 4.171 20 C -0.071 4.071 21 C -0.131 4.131 22 C -0.184 4.184 23 O -0.352 6.352 24 Si 0.666 3.334 25 C -0.042 4.042 26 C -0.145 4.145 27 C -0.137 4.137 28 H 0.113 0.887 29 H 0.089 0.911 30 H 0.087 0.913 31 H 0.083 0.917 32 H 0.085 0.915 33 H 0.103 0.897 34 H 0.086 0.914 35 H 0.101 0.899 36 H 0.094 0.906 37 H 0.078 0.922 38 H 0.084 0.916 39 H 0.253 0.747 40 H 0.183 0.817 41 H 0.182 0.818 42 H 0.156 0.844 43 H 0.237 0.763 44 H -0.234 1.234 45 H -0.205 1.205 46 H 0.177 0.823 47 H 0.093 0.907 48 H 0.096 0.904 49 H 0.082 0.918 50 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -6.462 1.021 4.000 7.668 hybrid contribution 1.320 -1.130 -0.015 1.738 sum -5.143 -0.109 3.984 6.506 Atomic orbital electron populations 1.21817 0.90622 1.04218 1.03802 1.23229 0.96961 0.79512 1.02302 1.86517 1.24338 1.33276 1.83478 1.24431 0.80498 0.93449 0.70905 1.90668 1.61178 1.44592 1.46871 1.21268 0.96510 0.88127 1.03652 0.85644 1.21496 1.01852 0.95742 0.95090 1.21613 0.93460 0.95745 1.03912 1.21395 0.96280 0.93328 1.00098 0.89500 1.21454 0.99954 0.92722 0.85657 1.45781 1.55245 1.13335 1.21605 1.18318 0.79311 0.82250 0.86125 1.90846 1.40506 1.66476 1.47571 1.20068 1.06835 0.94871 0.97430 1.18223 0.92415 0.90257 0.87832 1.91559 1.74169 1.80737 1.65088 1.21373 1.01240 1.02785 0.91724 1.21413 0.93240 0.93467 0.98980 1.20382 1.01176 0.95066 0.96475 1.25153 0.96923 0.95155 1.01121 1.86601 1.38217 1.32507 1.77924 0.94137 0.81010 0.81765 0.76473 1.21205 0.92474 0.99928 0.90604 1.21473 1.01090 0.93985 0.97912 1.21377 0.91658 0.97647 1.03007 0.88694 0.91076 0.91256 0.91681 0.91535 0.89679 0.91415 0.89908 0.90581 0.92214 0.91557 0.74738 0.81709 0.81773 0.84369 0.76274 1.23449 1.20484 0.82302 0.90708 0.90357 0.91823 0.91733 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.57 10.29 71.98 0.74 1.32 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.09 10.12 -51.37 -0.52 -1.61 16 4 C 0.46 1.93 7.25 71.24 0.52 2.45 16 5 O -0.54 -6.00 15.73 21.97 0.35 -5.65 16 6 C -0.08 0.20 2.63 -11.54 -0.03 0.17 16 7 H 0.13 -0.69 8.14 -2.39 -0.02 -0.71 16 8 C -0.10 0.63 5.13 30.59 0.16 0.79 16 9 C -0.11 0.90 5.08 30.59 0.16 1.05 16 10 C -0.09 0.59 2.23 -10.79 -0.02 0.57 16 11 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 12 C 0.13 -0.23 5.06 86.38 0.44 0.21 16 13 N -0.71 1.17 5.23 -466.11 -2.44 -1.27 16 14 C 0.55 3.50 7.77 86.74 0.67 4.17 16 15 O -0.57 -9.29 15.34 -3.94 -0.06 -9.35 16 16 C -0.19 -0.44 5.88 -20.05 -0.12 -0.56 16 17 C 0.13 0.60 7.29 22.67 0.17 0.77 16 18 F -0.14 -1.62 15.55 44.97 0.70 -0.92 16 19 C -0.15 0.41 10.01 22.28 0.22 0.64 16 20 C -0.05 0.37 8.66 22.32 0.19 0.56 16 21 C -0.13 0.87 5.34 -19.90 -0.11 0.76 16 22 C -0.07 0.60 2.80 71.24 0.20 0.80 16 23 O -0.54 2.51 12.83 -148.98 -1.91 0.60 16 24 Si 0.76 -5.88 29.87 68.60 2.05 -3.83 16 25 C -0.02 0.11 9.17 22.52 0.21 0.32 16 26 C -0.11 0.54 5.20 30.59 0.16 0.70 16 27 C -0.10 0.18 4.49 30.60 0.14 0.32 16 28 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 29 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 31 H 0.06 0.12 8.13 -2.39 -0.02 0.10 16 32 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 33 H 0.08 -0.54 8.11 -2.39 -0.02 -0.56 16 34 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 35 H 0.08 -0.86 7.18 -2.39 -0.02 -0.88 16 36 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 37 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 38 H 0.07 0.01 8.14 -2.38 -0.02 -0.01 16 39 H 0.41 -3.27 5.69 -92.71 -0.53 -3.79 16 40 H 0.17 -1.08 8.06 -2.91 -0.02 -1.10 16 41 H 0.17 -1.92 4.82 -2.91 -0.01 -1.94 16 42 H 0.14 -1.49 7.96 -2.39 -0.02 -1.51 16 43 H 0.39 -3.66 8.70 -74.06 -0.64 -4.30 16 44 H -0.31 -0.40 7.11 99.48 0.71 0.31 16 45 H -0.28 1.17 7.00 99.48 0.70 1.87 16 46 H 0.16 -1.54 6.41 -2.91 -0.02 -1.56 16 47 H 0.07 -0.34 8.14 -2.39 -0.02 -0.35 16 48 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 49 H 0.06 0.03 8.10 -2.39 -0.02 0.01 16 50 H 0.06 0.04 8.10 -2.39 -0.02 0.02 16 Total: 0.00 -26.25 408.22 2.12 -24.13 By element: Atomic # 1 Polarization: -17.44 SS G_CDS: -0.17 Total: -17.61 kcal Atomic # 6 Polarization: 11.39 SS G_CDS: 4.13 Total: 15.52 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -2.44 Total: -1.27 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: -2.15 Total: -16.02 kcal Atomic # 9 Polarization: -1.62 SS G_CDS: 0.70 Total: -0.92 kcal Atomic # 14 Polarization: -5.88 SS G_CDS: 2.05 Total: -3.83 kcal Total: -26.25 2.12 -24.13 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_12335834.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.537 kcal (2) G-P(sol) polarization free energy of solvation -26.253 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.123 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds