Wall clock time and date at job start Sun Mar 7 2021 07:14:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45199 * 109.47102 * 2 1 4 4 C 1.34234 * 116.99743 * 179.97438 * 3 2 1 5 5 O 1.20830 * 120.00168 * 0.02562 * 4 3 2 6 6 C 1.50702 * 119.99569 * 180.02562 * 4 3 2 7 7 H 1.08991 * 109.47315 * 60.00420 * 6 4 3 8 8 C 1.53001 * 109.46651 * 180.02562 * 6 4 3 9 9 C 1.53002 * 109.47048 * 179.97438 * 8 6 4 10 10 C 1.53004 * 109.47116 * 300.00263 * 9 8 6 11 11 H 1.08991 * 109.47214 * 299.99812 * 10 9 8 12 12 C 1.53004 * 109.46823 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.46593 * 175.00056 * 12 10 9 14 14 C 1.34785 * 119.99705 * 179.97438 * 13 12 10 15 15 O 1.21556 * 119.99939 * 0.02562 * 14 13 12 16 16 C 1.47849 * 119.99885 * 179.97438 * 14 13 12 17 17 C 1.39540 * 120.13904 * 0.02562 * 16 14 13 18 18 C 1.38070 * 119.84000 * 179.97438 * 17 16 14 19 19 Br 1.89103 * 119.93965 * 180.02562 * 18 17 16 20 20 C 1.38428 * 120.12765 * 0.02562 * 18 17 16 21 21 C 1.38370 * 120.27876 * 359.97039 * 20 18 17 22 22 C 1.50699 * 119.91978 * 180.02562 * 21 20 18 23 23 O 1.42892 * 109.47249 * 120.00477 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 359.97438 * 22 21 20 25 25 C 1.37939 * 120.15415 * 0.28382 * 21 20 18 26 26 C 1.53000 * 109.47127 * 59.99646 * 10 9 8 27 27 C 1.52989 * 109.47236 * 300.00104 * 26 10 9 28 28 H 1.08997 * 109.47323 * 59.99897 * 1 2 3 29 29 H 1.09002 * 109.47198 * 179.97438 * 1 2 3 30 30 H 1.09005 * 109.47154 * 300.00009 * 1 2 3 31 31 H 1.09005 * 109.47154 * 239.99990 * 2 1 3 32 32 H 1.09004 * 109.47235 * 120.00516 * 2 1 3 33 33 H 1.09003 * 109.47423 * 60.00316 * 8 6 4 34 34 H 1.08999 * 109.47304 * 299.99999 * 8 6 4 35 35 H 1.09003 * 109.47148 * 180.02562 * 9 8 6 36 36 H 1.09006 * 109.46989 * 59.99756 * 9 8 6 37 37 H 1.08998 * 109.47048 * 55.00240 * 12 10 9 38 38 H 1.08997 * 109.47252 * 294.99390 * 12 10 9 39 39 H 0.96997 * 120.00816 * 359.97438 * 13 12 10 40 40 H 1.08004 * 120.08327 * 0.02562 * 17 16 14 41 41 H 1.07994 * 119.85857 * 180.02562 * 20 18 17 42 42 H 1.09004 * 109.46453 * 240.00546 * 22 21 20 43 43 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 44 44 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 45 45 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 46 46 H 1.07999 * 120.06234 * 179.71686 * 25 21 20 47 47 H 1.09003 * 109.46803 * 60.00351 * 26 10 9 48 48 H 1.08999 * 109.47054 * 179.97438 * 26 10 9 49 49 H 1.09003 * 109.47426 * 299.99866 * 27 26 10 50 50 H 1.09002 * 109.47483 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5865 0.0005 6 6 3.9207 2.9374 0.0012 7 1 3.5845 3.4692 0.8911 8 6 5.4486 2.8572 0.0010 9 6 6.0335 4.2711 0.0010 10 6 5.5618 5.0181 -1.2482 11 1 5.8976 4.4861 -2.1381 12 6 6.1462 6.4321 -1.2478 13 7 5.7933 7.1066 -2.4995 14 6 6.2028 8.3712 -2.7223 15 8 6.8653 8.9520 -1.8847 16 6 5.8471 9.0517 -3.9857 17 6 5.0872 8.3876 -4.9494 18 6 4.7582 9.0291 -6.1269 19 35 3.7279 8.1320 -7.4344 20 6 5.1811 10.3278 -6.3522 21 6 5.9348 10.9912 -5.4001 22 6 6.3904 12.4052 -5.6535 23 8 5.8630 13.2643 -4.6408 24 14 5.7805 12.9643 -7.3227 25 6 6.2745 10.3595 -4.2219 26 6 4.0339 5.0982 -1.2480 27 6 3.4491 3.6844 -1.2480 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8900 31 1 1.8933 -0.5139 -0.8900 32 1 1.8934 -0.5139 0.8900 33 1 5.7846 2.3255 -0.8892 34 1 5.7846 2.3247 0.8907 35 1 7.1220 4.2140 0.0005 36 1 5.6976 4.8032 0.8911 37 1 7.2311 6.3769 -1.1582 38 1 5.7400 6.9929 -0.4060 39 1 5.2650 6.6431 -3.1681 40 1 4.7565 7.3744 -4.7743 41 1 4.9209 10.8256 -7.2746 42 1 7.4795 12.4451 -5.6330 43 1 4.8969 13.2787 -4.6011 44 1 4.2985 12.8841 -7.3750 45 1 6.2237 14.3572 -7.5849 46 1 6.8667 10.8771 -3.4817 47 1 3.6981 5.6303 -0.3580 48 1 3.6979 5.6307 -2.1377 49 1 3.7850 3.1523 -2.1381 50 1 2.3606 3.7414 -1.2475 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_12335870.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:14:00 Heat of formation + Delta-G solvation = -138.190431 kcal Electronic energy + Delta-G solvation = -32143.884994 eV Core-core repulsion = 27569.216411 eV Total energy + Delta-G solvation = -4574.668583 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.092 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -41.85678 -41.55926 -40.20692 -39.37067 -37.82346 -37.72901 -36.05215 -33.63347 -33.60446 -32.82571 -32.03990 -31.71663 -30.43963 -27.91490 -26.98868 -25.37997 -24.28824 -23.75393 -23.11147 -22.80012 -21.63616 -21.45996 -20.69700 -19.21911 -18.73468 -18.03894 -17.69241 -17.65911 -17.52335 -17.27661 -16.62646 -16.35824 -16.29809 -15.93541 -15.70213 -15.29012 -15.14606 -14.99967 -14.91195 -14.73870 -14.64963 -14.26415 -14.16177 -13.84755 -13.68415 -13.53057 -13.27135 -13.24814 -13.01695 -12.99625 -12.89539 -12.56756 -12.29797 -12.25841 -12.10587 -11.95386 -11.87926 -11.82497 -11.58531 -11.48640 -11.43679 -11.27121 -11.13829 -11.08084 -10.71755 -10.38736 -10.09622 -9.88952 -4.96900 -0.50100 -0.14901 0.44769 1.10303 1.21227 1.54693 1.55720 1.64249 1.91482 2.01691 2.48269 3.25886 3.34463 3.41615 3.47019 3.59299 3.66206 3.81623 3.84999 3.89632 3.94933 3.97597 3.98105 4.03193 4.15072 4.22448 4.26806 4.30904 4.32951 4.39239 4.45886 4.51017 4.55766 4.65979 4.72822 4.77416 4.81499 4.84390 4.88043 4.94387 4.96857 5.07555 5.10104 5.11610 5.12909 5.17096 5.22158 5.28028 5.34250 5.39852 5.44075 5.50829 6.37369 6.42904 6.66240 7.05152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.125 0.875 8 C -0.099 4.099 9 C -0.107 4.107 10 C -0.093 4.093 11 H 0.089 0.911 12 C 0.125 3.875 13 N -0.708 5.708 14 C 0.558 3.442 15 O -0.574 6.574 16 C -0.135 4.135 17 C -0.044 4.044 18 C -0.099 4.099 19 Br -0.029 7.029 20 C -0.061 4.061 21 C -0.114 4.114 22 C -0.083 4.083 23 O -0.545 6.545 24 Si 0.761 3.239 25 C -0.030 4.030 26 C -0.111 4.111 27 C -0.105 4.105 28 H 0.070 0.930 29 H 0.095 0.905 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.064 0.936 34 H 0.063 0.937 35 H 0.076 0.924 36 H 0.077 0.923 37 H 0.063 0.937 38 H 0.066 0.934 39 H 0.414 0.586 40 H 0.162 0.838 41 H 0.156 0.844 42 H 0.131 0.869 43 H 0.388 0.612 44 H -0.273 1.273 45 H -0.298 1.298 46 H 0.131 0.869 47 H 0.074 0.926 48 H 0.082 0.918 49 H 0.069 0.931 50 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.105 -2.186 -3.816 6.016 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.142 0.858 8 C -0.137 4.137 9 C -0.144 4.144 10 C -0.112 4.112 11 H 0.107 0.893 12 C 0.002 3.998 13 N -0.361 5.361 14 C 0.346 3.654 15 O -0.455 6.455 16 C -0.139 4.139 17 C -0.064 4.064 18 C -0.178 4.178 19 Br 0.057 6.943 20 C -0.081 4.081 21 C -0.115 4.115 22 C -0.192 4.192 23 O -0.354 6.354 24 Si 0.665 3.335 25 C -0.049 4.049 26 C -0.148 4.148 27 C -0.142 4.142 28 H 0.089 0.911 29 H 0.113 0.887 30 H 0.087 0.913 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.082 0.918 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.082 0.918 38 H 0.085 0.915 39 H 0.252 0.748 40 H 0.180 0.820 41 H 0.173 0.827 42 H 0.149 0.851 43 H 0.237 0.763 44 H -0.199 1.199 45 H -0.225 1.225 46 H 0.149 0.851 47 H 0.093 0.907 48 H 0.100 0.900 49 H 0.087 0.913 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.717 -1.811 -4.019 5.766 hybrid contribution -0.498 -0.088 1.221 1.322 sum -4.215 -1.899 -2.798 5.404 Atomic orbital electron populations 1.21820 0.90662 1.04222 1.03771 1.23228 0.96932 0.79514 1.02322 1.86519 1.24387 1.33282 1.83490 1.24449 0.80477 0.93478 0.70904 1.90669 1.61162 1.44590 1.46859 1.21272 0.96618 0.88078 1.03603 0.85765 1.21382 0.91542 0.97748 1.03032 1.21476 1.01168 0.93905 0.97898 1.21405 0.96100 0.93498 1.00170 0.89285 1.21469 1.00161 0.92641 0.85568 1.45832 1.55242 1.13456 1.21557 1.18325 0.79046 0.81997 0.86067 1.90809 1.40677 1.66464 1.47510 1.19884 1.03115 0.95824 0.95125 1.21456 0.93980 1.00397 0.90572 1.21734 1.03582 0.96361 0.96156 1.96864 1.68794 1.76724 1.51907 1.21378 0.94526 0.93031 0.99140 1.20257 0.99432 0.97402 0.94417 1.25292 1.04609 0.86462 1.02830 1.86613 1.27376 1.66060 1.55317 0.94192 0.79621 0.81625 0.78076 1.21254 0.94871 0.92587 0.96203 1.21619 0.93671 0.95686 1.03837 1.21498 1.01771 0.95809 0.95143 0.91106 0.88675 0.91290 0.91490 0.91681 0.91722 0.91786 0.90543 0.90444 0.91825 0.91535 0.74804 0.82023 0.82672 0.85146 0.76271 1.19930 1.22535 0.85143 0.90697 0.89958 0.91265 0.89872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.60 10.29 71.98 0.74 1.34 16 2 C 0.05 0.04 6.19 71.98 0.45 0.48 16 3 O -0.36 -0.99 10.12 -51.45 -0.52 -1.51 16 4 C 0.46 1.73 7.25 71.24 0.52 2.25 16 5 O -0.54 -5.73 15.73 21.95 0.35 -5.39 16 6 C -0.08 0.25 2.63 -11.54 -0.03 0.21 16 7 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 8 C -0.10 0.27 4.49 30.60 0.14 0.41 16 9 C -0.11 0.66 5.20 30.60 0.16 0.82 16 10 C -0.09 0.73 2.23 -10.79 -0.02 0.70 16 11 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 12 C 0.12 -0.47 5.06 86.38 0.44 -0.04 16 13 N -0.71 2.67 5.23 -465.95 -2.44 0.24 16 14 C 0.56 1.84 7.77 86.79 0.67 2.52 16 15 O -0.57 -7.07 16.35 -3.89 -0.06 -7.14 16 16 C -0.14 -0.03 5.87 -20.09 -0.12 -0.15 16 17 C -0.04 0.19 9.28 22.54 0.21 0.40 16 18 C -0.10 0.35 6.22 22.28 0.14 0.49 16 19 Br -0.03 0.11 33.69 -20.37 -0.69 -0.58 16 20 C -0.06 0.22 8.41 22.35 0.19 0.41 16 21 C -0.11 0.19 5.38 -19.90 -0.11 0.09 16 22 C -0.08 0.17 2.82 71.24 0.20 0.37 16 23 O -0.55 -0.91 12.77 -148.98 -1.90 -2.81 16 24 Si 0.76 -2.91 29.78 68.60 2.04 -0.87 16 25 C -0.03 -0.05 9.16 22.53 0.21 0.15 16 26 C -0.11 1.00 5.08 30.59 0.16 1.15 16 27 C -0.10 0.70 5.13 30.59 0.16 0.85 16 28 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 29 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 30 H 0.07 -0.27 8.14 -2.38 -0.02 -0.29 16 31 H 0.07 0.08 8.13 -2.38 -0.02 0.06 16 32 H 0.06 0.10 8.13 -2.39 -0.02 0.08 16 33 H 0.06 -0.04 8.10 -2.39 -0.02 -0.05 16 34 H 0.06 0.00 8.10 -2.39 -0.02 -0.02 16 35 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 36 H 0.08 -0.54 8.14 -2.38 -0.02 -0.56 16 37 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 38 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 39 H 0.41 -3.99 5.69 -92.71 -0.53 -4.51 16 40 H 0.16 -1.63 6.41 -2.91 -0.02 -1.65 16 41 H 0.16 -1.06 4.86 -2.91 -0.01 -1.07 16 42 H 0.13 -0.45 7.96 -2.38 -0.02 -0.47 16 43 H 0.39 -1.66 8.70 -74.06 -0.64 -2.31 16 44 H -0.27 0.22 7.11 99.48 0.71 0.93 16 45 H -0.30 -1.24 7.11 99.48 0.71 -0.53 16 46 H 0.13 0.69 7.65 -2.91 -0.02 0.67 16 47 H 0.07 -0.64 8.14 -2.39 -0.02 -0.66 16 48 H 0.08 -0.92 7.18 -2.39 -0.02 -0.94 16 49 H 0.07 -0.42 8.14 -2.39 -0.02 -0.43 16 50 H 0.08 -0.55 8.11 -2.39 -0.02 -0.57 16 Total: 0.00 -21.84 424.94 0.70 -21.13 By element: Atomic # 1 Polarization: -15.38 SS G_CDS: -0.16 Total: -15.54 kcal Atomic # 6 Polarization: 8.38 SS G_CDS: 4.09 Total: 12.47 kcal Atomic # 7 Polarization: 2.67 SS G_CDS: -2.44 Total: 0.24 kcal Atomic # 8 Polarization: -14.71 SS G_CDS: -2.14 Total: -16.85 kcal Atomic # 14 Polarization: -2.91 SS G_CDS: 2.04 Total: -0.87 kcal Atomic # 35 Polarization: 0.11 SS G_CDS: -0.69 Total: -0.58 kcal Total: -21.84 0.70 -21.13 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_12335870.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.056 kcal (2) G-P(sol) polarization free energy of solvation -21.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.704 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.134 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds