Wall clock time and date at job start Sun Mar 7 2021 07:14:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.47144 * 2 1 4 4 C 1.34225 * 116.99771 * 179.97438 * 3 2 1 5 5 O 1.20830 * 120.00307 * 0.02562 * 4 3 2 6 6 C 1.50695 * 120.00102 * 179.97438 * 4 3 2 7 7 H 1.09004 * 109.47485 * 300.00563 * 6 4 3 8 8 C 1.52997 * 109.47134 * 60.00497 * 6 4 3 9 9 C 1.52997 * 109.47504 * 180.02562 * 8 6 4 10 10 C 1.53004 * 109.47236 * 300.00184 * 9 8 6 11 11 H 1.09004 * 109.46741 * 300.00111 * 10 9 8 12 12 C 1.52997 * 109.47236 * 180.02562 * 10 9 8 13 13 N 1.46505 * 109.47212 * 64.99775 * 12 10 9 14 14 C 1.34771 * 119.99622 * 179.97438 * 13 12 10 15 15 O 1.21570 * 120.00608 * 0.02562 * 14 13 12 16 16 C 1.47704 * 119.99538 * 180.02562 * 14 13 12 17 17 C 1.39806 * 120.15102 * 179.72898 * 16 14 13 18 18 F 1.35104 * 120.08541 * 359.97438 * 17 16 14 19 19 C 1.38321 * 119.82762 * 179.76541 * 17 16 14 20 20 C 1.38181 * 120.14353 * 0.48591 * 19 17 16 21 21 C 1.50705 * 119.84205 * 179.74135 * 20 19 17 22 22 O 1.42895 * 109.47118 * 255.02729 * 21 20 19 23 23 Si 1.86307 * 109.46874 * 15.02568 * 21 20 19 24 24 C 1.38653 * 120.31767 * 359.76724 * 20 19 17 25 25 F 1.35103 * 119.91925 * 179.97438 * 24 20 19 26 26 C 1.38063 * 120.16647 * 0.02562 * 24 20 19 27 27 C 1.52997 * 109.47024 * 59.99522 * 10 9 8 28 28 C 1.52997 * 109.47504 * 300.00313 * 27 10 9 29 29 H 1.08995 * 109.47173 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47037 * 299.99972 * 1 2 3 31 31 H 1.08998 * 109.46833 * 59.99402 * 1 2 3 32 32 H 1.09000 * 109.47037 * 240.00028 * 2 1 3 33 33 H 1.08999 * 109.46876 * 120.00043 * 2 1 3 34 34 H 1.09002 * 109.47016 * 300.00316 * 8 6 4 35 35 H 1.09004 * 109.47325 * 59.99993 * 8 6 4 36 36 H 1.09001 * 109.47630 * 180.02562 * 9 8 6 37 37 H 1.09004 * 109.47346 * 59.99924 * 9 8 6 38 38 H 1.09002 * 109.47153 * 304.99767 * 12 10 9 39 39 H 1.09001 * 109.46832 * 184.99958 * 12 10 9 40 40 H 0.96996 * 119.99606 * 0.02562 * 13 12 10 41 41 H 1.08002 * 119.92374 * 180.20696 * 19 17 16 42 42 H 1.08993 * 109.46899 * 135.02222 * 21 20 19 43 43 H 0.96703 * 114.00656 * 59.99645 * 22 21 20 44 44 H 1.48503 * 109.99954 * 58.67591 * 23 21 20 45 45 H 1.48490 * 109.99958 * 180.02562 * 23 21 20 46 46 H 1.08006 * 120.07999 * 180.02562 * 26 24 20 47 47 H 1.09004 * 109.46881 * 60.00674 * 27 10 9 48 48 H 1.09002 * 109.47016 * 180.02562 * 27 10 9 49 49 H 1.09001 * 109.47630 * 179.97438 * 28 27 10 50 50 H 1.09004 * 109.47346 * 300.00076 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5853 3.4690 -0.8904 8 6 3.4488 3.6850 1.2486 9 6 4.0331 5.0990 1.2478 10 6 5.5611 5.0194 1.2481 11 1 5.8970 4.4879 2.1385 12 6 6.1454 6.4334 1.2480 13 7 5.7922 7.1080 2.4996 14 6 6.2024 8.3722 2.7227 15 8 6.8653 8.9530 1.8853 16 6 5.8467 9.0520 3.9849 17 6 6.2754 10.3614 4.2222 18 9 7.0173 11.0092 3.2974 19 6 5.9344 10.9934 5.4043 20 6 5.1805 10.3299 6.3534 21 6 4.8177 11.0230 7.6416 22 8 5.6219 10.5059 8.7035 23 14 5.1197 12.8532 7.4684 24 6 4.7566 9.0294 6.1266 25 9 4.0203 8.3881 7.0603 26 6 5.0860 8.3877 4.9494 27 6 6.0331 4.2718 -0.0005 28 6 5.4488 2.8578 0.0003 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 1.8934 -0.5138 -0.8900 33 1 1.8933 -0.5138 0.8900 34 1 2.3603 3.7420 1.2481 35 1 3.7844 3.1533 2.1391 36 1 3.6973 5.6315 2.1376 37 1 3.6972 5.6305 0.3574 38 1 5.7396 6.9942 0.4059 39 1 7.2304 6.3782 1.1586 40 1 5.2636 6.6444 3.1679 41 1 6.2619 12.0061 5.5878 42 1 3.7652 10.8479 7.8644 43 1 6.5723 10.6270 8.5722 44 1 4.3131 13.3971 6.3464 45 1 4.7664 13.5481 8.7322 46 1 4.7547 7.3748 4.7740 47 1 5.6972 4.8033 -0.8909 48 1 7.1216 4.2147 0.0000 49 1 5.7847 2.3252 -0.8895 50 1 5.7847 2.3263 0.8907 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_12360598.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:14:13 Heat of formation + Delta-G solvation = -227.786006 kcal Electronic energy + Delta-G solvation = -35303.210039 eV Core-core repulsion = 30125.566352 eV Total energy + Delta-G solvation = -5177.643687 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.163 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.10800 -50.07739 -41.85214 -41.35485 -40.06905 -39.38307 -37.75189 -37.62684 -36.05361 -33.75226 -32.89911 -32.10304 -31.72784 -31.36375 -28.41793 -27.07650 -24.79488 -24.38944 -23.82689 -23.66840 -23.03545 -21.81995 -21.62165 -20.76848 -19.66619 -18.81203 -18.74597 -18.59847 -17.92409 -17.68486 -17.58015 -17.36413 -16.98879 -16.70357 -16.59996 -16.34979 -16.07584 -15.87514 -15.79651 -15.51711 -15.27499 -15.19273 -15.04397 -14.84165 -14.64575 -14.56225 -14.19475 -13.89577 -13.81340 -13.70210 -13.53279 -13.25439 -13.15317 -13.00721 -12.97910 -12.89066 -12.57505 -12.34643 -12.26332 -12.17301 -12.10824 -11.87666 -11.59267 -11.45715 -11.32625 -11.14208 -11.08008 -10.61064 -10.58683 -10.19759 -9.81266 -5.04902 -0.80103 -0.30137 1.09654 1.16388 1.40898 1.62365 1.63608 1.89241 1.93918 2.25898 2.79808 2.85796 3.12906 3.29617 3.41616 3.52113 3.55425 3.59431 3.66077 3.80992 3.84669 3.94248 3.97737 4.02351 4.14000 4.17039 4.27023 4.30820 4.32250 4.34141 4.38794 4.45618 4.50573 4.54522 4.66064 4.69705 4.71722 4.75014 4.81481 4.84047 4.87245 4.96723 5.08202 5.10901 5.11812 5.16400 5.21737 5.26577 5.33895 5.39059 5.43352 5.50359 6.31962 6.65553 6.68318 7.00471 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.125 0.875 8 C -0.105 4.105 9 C -0.111 4.111 10 C -0.093 4.093 11 H 0.089 0.911 12 C 0.125 3.875 13 N -0.706 5.706 14 C 0.556 3.444 15 O -0.561 6.561 16 C -0.148 4.148 17 C 0.141 3.859 18 F -0.122 7.122 19 C -0.120 4.120 20 C -0.098 4.098 21 C -0.078 4.078 22 O -0.547 6.547 23 Si 0.778 3.222 24 C 0.099 3.901 25 F -0.130 7.130 26 C -0.078 4.078 27 C -0.106 4.106 28 C -0.099 4.099 29 H 0.095 0.905 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.065 0.935 33 H 0.066 0.934 34 H 0.082 0.918 35 H 0.068 0.932 36 H 0.082 0.918 37 H 0.075 0.925 38 H 0.068 0.932 39 H 0.065 0.935 40 H 0.414 0.586 41 H 0.181 0.819 42 H 0.114 0.886 43 H 0.399 0.601 44 H -0.280 1.280 45 H -0.291 1.291 46 H 0.179 0.821 47 H 0.077 0.923 48 H 0.076 0.924 49 H 0.063 0.937 50 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.150 -0.035 1.466 2.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.143 0.857 8 C -0.143 4.143 9 C -0.149 4.149 10 C -0.112 4.112 11 H 0.107 0.893 12 C 0.002 3.998 13 N -0.359 5.359 14 C 0.343 3.657 15 O -0.441 6.441 16 C -0.153 4.153 17 C 0.120 3.880 18 F -0.100 7.100 19 C -0.138 4.138 20 C -0.099 4.099 21 C -0.187 4.187 22 O -0.355 6.355 23 Si 0.681 3.319 24 C 0.080 3.920 25 F -0.108 7.108 26 C -0.097 4.097 27 C -0.144 4.144 28 C -0.137 4.137 29 H 0.113 0.887 30 H 0.089 0.911 31 H 0.087 0.913 32 H 0.083 0.917 33 H 0.085 0.915 34 H 0.101 0.899 35 H 0.087 0.913 36 H 0.101 0.899 37 H 0.094 0.906 38 H 0.086 0.914 39 H 0.083 0.917 40 H 0.253 0.747 41 H 0.198 0.802 42 H 0.132 0.868 43 H 0.250 0.750 44 H -0.206 1.206 45 H -0.218 1.218 46 H 0.197 0.803 47 H 0.096 0.904 48 H 0.095 0.905 49 H 0.082 0.918 50 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -2.428 0.647 1.100 2.743 hybrid contribution -0.597 -1.200 0.102 1.344 sum -3.025 -0.554 1.202 3.302 Atomic orbital electron populations 1.21820 0.90667 1.04224 1.03764 1.23229 0.96930 0.79515 1.02324 1.86518 1.24405 1.33283 1.83490 1.24456 0.80472 0.93500 0.70905 1.90670 1.61160 1.44603 1.46862 1.21274 0.96647 0.88051 1.03608 0.85730 1.21502 1.01758 0.95869 0.95143 1.21631 0.93694 0.95634 1.03893 1.21408 0.96076 0.93517 1.00198 0.89276 1.21485 1.00274 0.92580 0.85458 1.45790 1.55144 1.13235 1.21681 1.18038 0.79623 0.82324 0.85717 1.90877 1.39983 1.66196 1.47035 1.19856 1.04261 0.94457 0.96681 1.17807 0.92663 0.89983 0.87553 1.91614 1.73368 1.80517 1.64516 1.20997 0.99580 1.01963 0.91277 1.20567 0.97887 0.93601 0.97882 1.25262 0.98576 1.10340 0.84506 1.86554 1.23280 1.83652 1.42009 0.93798 0.89875 0.70687 0.77506 1.17401 0.95823 0.91126 0.87686 1.91567 1.74211 1.81143 1.63921 1.21326 0.96177 1.01743 0.90500 1.21472 1.01197 0.93848 0.97918 1.21385 0.91515 0.97801 1.03018 0.88671 0.91130 0.91277 0.91654 0.91511 0.89923 0.91322 0.89907 0.90614 0.91369 0.91672 0.74711 0.80212 0.86845 0.75028 1.20592 1.21801 0.80339 0.90387 0.90497 0.91786 0.91757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.04 6.19 71.98 0.45 0.49 16 3 O -0.36 -1.01 10.12 -51.37 -0.52 -1.53 16 4 C 0.46 1.73 7.26 71.23 0.52 2.25 16 5 O -0.54 -5.75 15.73 21.95 0.35 -5.40 16 6 C -0.08 0.25 2.63 -11.54 -0.03 0.22 16 7 H 0.12 -0.76 8.14 -2.39 -0.02 -0.77 16 8 C -0.11 0.71 5.13 30.59 0.16 0.87 16 9 C -0.11 1.05 5.08 30.59 0.16 1.20 16 10 C -0.09 0.77 2.22 -10.79 -0.02 0.75 16 11 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 12 C 0.13 -0.56 5.07 86.38 0.44 -0.12 16 13 N -0.71 3.21 5.23 -466.11 -2.44 0.77 16 14 C 0.56 1.58 7.77 86.75 0.67 2.26 16 15 O -0.56 -6.79 15.34 -3.94 -0.06 -6.85 16 16 C -0.15 0.05 5.88 -20.05 -0.12 -0.06 16 17 C 0.14 0.16 7.28 22.67 0.17 0.33 16 18 F -0.12 -0.84 15.55 44.97 0.70 -0.14 16 19 C -0.12 0.50 8.62 22.28 0.19 0.69 16 20 C -0.10 0.34 5.27 -19.78 -0.10 0.23 16 21 C -0.08 0.27 2.44 71.24 0.17 0.45 16 22 O -0.55 1.40 12.88 -148.98 -1.92 -0.52 16 23 Si 0.78 -4.08 29.90 68.60 2.05 -2.03 16 24 C 0.10 -0.23 7.23 22.33 0.16 -0.07 16 25 F -0.13 -0.12 16.73 44.97 0.75 0.64 16 26 C -0.08 0.40 9.51 22.57 0.21 0.62 16 27 C -0.11 0.70 5.20 30.59 0.16 0.86 16 28 C -0.10 0.29 4.50 30.59 0.14 0.42 16 29 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 31 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 33 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 34 H 0.08 -0.55 8.11 -2.39 -0.02 -0.57 16 35 H 0.07 -0.42 8.14 -2.38 -0.02 -0.44 16 36 H 0.08 -0.97 7.18 -2.39 -0.02 -0.99 16 37 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 38 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 39 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.41 -4.45 5.69 -92.71 -0.53 -4.97 16 41 H 0.18 -1.71 5.10 -2.91 -0.01 -1.73 16 42 H 0.11 -0.21 7.89 -2.39 -0.02 -0.23 16 43 H 0.40 -4.55 8.70 -74.05 -0.64 -5.20 16 44 H -0.28 0.08 7.11 99.48 0.71 0.79 16 45 H -0.29 -0.67 7.11 99.48 0.71 0.03 16 46 H 0.18 -2.11 6.41 -2.91 -0.02 -2.13 16 47 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 48 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 49 H 0.06 -0.01 8.10 -2.39 -0.02 -0.03 16 50 H 0.06 -0.04 8.10 -2.39 -0.02 -0.06 16 Total: 0.00 -25.54 414.38 2.83 -22.71 By element: Atomic # 1 Polarization: -20.21 SS G_CDS: -0.14 Total: -20.35 kcal Atomic # 6 Polarization: 8.65 SS G_CDS: 4.05 Total: 12.70 kcal Atomic # 7 Polarization: 3.21 SS G_CDS: -2.44 Total: 0.77 kcal Atomic # 8 Polarization: -12.15 SS G_CDS: -2.15 Total: -14.30 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 1.45 Total: 0.50 kcal Atomic # 14 Polarization: -4.08 SS G_CDS: 2.05 Total: -2.03 kcal Total: -25.54 2.83 -22.71 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_12360598.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -205.074 kcal (2) G-P(sol) polarization free energy of solvation -25.539 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -230.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -227.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds