Wall clock time and date at job start Sun Mar 7 2021 07:14:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45199 * 109.47429 * 2 1 4 4 C 1.34226 * 116.99817 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00232 * 0.02562 * 4 3 2 6 6 C 1.50704 * 119.99678 * 179.97438 * 4 3 2 7 7 H 1.08998 * 109.46834 * 60.00397 * 6 4 3 8 8 C 1.53004 * 109.47017 * 180.02562 * 6 4 3 9 9 C 1.52998 * 109.47020 * 180.02562 * 8 6 4 10 10 C 1.52999 * 109.47123 * 299.99957 * 9 8 6 11 11 H 1.09005 * 109.47066 * 299.99719 * 10 9 8 12 12 C 1.52998 * 109.47086 * 180.02562 * 10 9 8 13 13 N 1.46493 * 109.47250 * 175.00126 * 12 10 9 14 14 C 1.34778 * 120.00217 * 179.97438 * 13 12 10 15 15 O 1.21567 * 120.00107 * 359.97438 * 14 13 12 16 16 C 1.47729 * 120.00176 * 179.97438 * 14 13 12 17 17 C 1.39624 * 120.11858 * 179.97438 * 16 14 13 18 18 C 1.37865 * 119.87988 * 180.02562 * 17 16 14 19 19 C 1.50699 * 119.94228 * 179.97438 * 18 17 16 20 20 O 1.42900 * 109.46644 * 14.98655 * 19 18 17 21 21 Si 1.86291 * 109.46909 * 134.98108 * 19 18 17 22 22 C 1.38628 * 120.11611 * 359.97438 * 18 17 16 23 23 F 1.35095 * 119.88081 * 180.26898 * 22 18 17 24 24 C 1.38685 * 120.24077 * 359.97438 * 22 18 17 25 25 C 1.37804 * 120.11875 * 0.02562 * 24 22 18 26 26 C 1.52995 * 109.47215 * 59.99928 * 10 9 8 27 27 C 1.52998 * 109.47134 * 300.00065 * 26 10 9 28 28 H 1.09000 * 109.46811 * 59.99765 * 1 2 3 29 29 H 1.08995 * 109.47455 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46967 * 300.00459 * 1 2 3 31 31 H 1.08998 * 109.46967 * 239.99541 * 2 1 3 32 32 H 1.09000 * 109.46811 * 120.00235 * 2 1 3 33 33 H 1.09000 * 109.46939 * 59.99910 * 8 6 4 34 34 H 1.09006 * 109.46868 * 300.00268 * 8 6 4 35 35 H 1.09005 * 109.46720 * 179.97438 * 9 8 6 36 36 H 1.08998 * 109.47061 * 60.00089 * 9 8 6 37 37 H 1.09002 * 109.47669 * 54.99393 * 12 10 9 38 38 H 1.09007 * 109.47005 * 294.99612 * 12 10 9 39 39 H 0.97006 * 120.00154 * 359.97438 * 13 12 10 40 40 H 1.08003 * 120.06119 * 0.02562 * 17 16 14 41 41 H 1.08993 * 109.47103 * 254.98631 * 19 18 17 42 42 H 0.96703 * 114.00749 * 59.99604 * 20 19 18 43 43 H 1.48503 * 110.00278 * 58.68250 * 21 19 18 44 44 H 1.48498 * 110.00111 * 180.02562 * 21 19 18 45 45 H 1.08006 * 119.93841 * 179.97438 * 24 22 18 46 46 H 1.08000 * 120.06355 * 179.97438 * 25 24 22 47 47 H 1.08998 * 109.46939 * 59.99886 * 26 10 9 48 48 H 1.08997 * 109.46861 * 179.97438 * 26 10 9 49 49 H 1.08998 * 109.47061 * 299.99746 * 27 26 10 50 50 H 1.09003 * 109.47209 * 179.97438 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0807 0.5865 0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5845 3.4699 0.8895 8 6 5.4488 2.8571 0.0001 9 6 6.0336 4.2709 0.0002 10 6 5.5622 5.0179 -1.2491 11 1 5.8983 4.4858 -2.1391 12 6 6.1475 6.4315 -1.2493 13 7 5.7949 7.1059 -2.5010 14 6 6.2052 8.3701 -2.7242 15 8 6.8676 8.9510 -1.8866 16 6 5.8501 9.0500 -3.9868 17 6 6.2734 10.3598 -4.2203 18 6 5.9388 10.9898 -5.4001 19 6 6.3944 12.4037 -5.6533 20 8 7.4217 12.7472 -4.7212 21 14 7.0592 12.5405 -7.3882 22 6 5.1838 10.3248 -6.3538 23 9 4.8632 10.9447 -7.5105 24 6 4.7616 9.0233 -6.1274 25 6 5.0905 8.3843 -4.9516 26 6 4.0343 5.0980 -1.2492 27 6 3.4495 3.6842 -1.2493 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 1.8933 -0.5139 -0.8899 32 1 1.8933 -0.5139 0.8900 33 1 5.7847 2.3246 -0.8896 34 1 5.7846 2.3253 0.8904 35 1 7.1222 4.2138 0.0008 36 1 5.6976 4.8030 0.8902 37 1 7.2324 6.3756 -1.1597 38 1 5.7420 6.9928 -0.4075 39 1 5.2661 6.6425 -3.1693 40 1 6.8620 10.8786 -3.4781 41 1 5.5517 13.0842 -5.5324 42 1 8.2044 12.1816 -4.7723 43 1 6.0101 12.1551 -8.3661 44 1 7.5125 13.9301 -7.6504 45 1 4.1733 8.5100 -6.8736 46 1 4.7609 7.3709 -4.7761 47 1 3.6983 5.6301 -0.3593 48 1 3.6986 5.6306 -2.1390 49 1 3.7855 3.1521 -2.1393 50 1 2.3610 3.7413 -1.2490 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_12496548.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:14:21 Heat of formation + Delta-G solvation = -177.683748 kcal Electronic energy + Delta-G solvation = -32522.494874 eV Core-core repulsion = 27816.477760 eV Total energy + Delta-G solvation = -4706.017114 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.172 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -50.40658 -41.83273 -41.38232 -39.96695 -39.26479 -37.73723 -37.67548 -35.98217 -33.40589 -32.72631 -32.25432 -31.77730 -31.59666 -27.88671 -26.96966 -25.17038 -24.21397 -23.72771 -23.22151 -23.08440 -21.60357 -21.44847 -20.68406 -19.32305 -18.78304 -18.71358 -18.04601 -17.71689 -17.66389 -17.53854 -17.12500 -16.81731 -16.45651 -15.97784 -15.86857 -15.74974 -15.26386 -15.23464 -15.10346 -14.97515 -14.74529 -14.67353 -14.62083 -14.00934 -13.89009 -13.72649 -13.70146 -13.51522 -13.33392 -13.21102 -12.97305 -12.87507 -12.75751 -12.55819 -12.34201 -12.22411 -12.08067 -11.84203 -11.57493 -11.44533 -11.41254 -11.25201 -11.10382 -11.03785 -10.89447 -10.21672 -10.00345 -9.68242 -5.03882 -0.48074 0.05027 1.11549 1.21872 1.60833 1.64661 1.65498 1.95124 2.08681 2.62455 3.01684 3.26809 3.35627 3.44189 3.60450 3.64562 3.69434 3.72085 3.87943 3.95858 4.00912 4.02230 4.04084 4.11011 4.18548 4.28874 4.32711 4.36585 4.41725 4.49407 4.53327 4.59456 4.69525 4.76780 4.81846 4.83879 4.87019 4.88813 4.92713 5.00192 5.04363 5.10851 5.12521 5.13030 5.15420 5.20408 5.24839 5.33659 5.38851 5.45412 5.53961 5.63413 6.47717 6.61602 6.67407 7.15383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.123 0.877 8 C -0.099 4.099 9 C -0.107 4.107 10 C -0.092 4.092 11 H 0.090 0.910 12 C 0.125 3.875 13 N -0.708 5.708 14 C 0.558 3.442 15 O -0.577 6.577 16 C -0.150 4.150 17 C -0.029 4.029 18 C -0.158 4.158 19 C -0.071 4.071 20 O -0.551 6.551 21 Si 0.761 3.239 22 C 0.104 3.896 23 F -0.131 7.131 24 C -0.145 4.145 25 C -0.044 4.044 26 C -0.111 4.111 27 C -0.105 4.105 28 H 0.070 0.930 29 H 0.094 0.906 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.062 0.938 35 H 0.076 0.924 36 H 0.075 0.925 37 H 0.063 0.937 38 H 0.064 0.936 39 H 0.415 0.585 40 H 0.142 0.858 41 H 0.114 0.886 42 H 0.397 0.603 43 H -0.255 1.255 44 H -0.305 1.305 45 H 0.171 0.829 46 H 0.174 0.826 47 H 0.072 0.928 48 H 0.085 0.915 49 H 0.070 0.930 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.246 -4.834 -2.396 6.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.141 0.859 8 C -0.137 4.137 9 C -0.145 4.145 10 C -0.111 4.111 11 H 0.109 0.891 12 C 0.002 3.998 13 N -0.361 5.361 14 C 0.346 3.654 15 O -0.458 6.458 16 C -0.153 4.153 17 C -0.048 4.048 18 C -0.159 4.159 19 C -0.180 4.180 20 O -0.359 6.359 21 Si 0.665 3.335 22 C 0.084 3.916 23 F -0.110 7.110 24 C -0.164 4.164 25 C -0.063 4.063 26 C -0.148 4.148 27 C -0.142 4.142 28 H 0.089 0.911 29 H 0.113 0.887 30 H 0.087 0.913 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.081 0.919 35 H 0.094 0.906 36 H 0.094 0.906 37 H 0.081 0.919 38 H 0.082 0.918 39 H 0.254 0.746 40 H 0.160 0.840 41 H 0.131 0.869 42 H 0.247 0.753 43 H -0.181 1.181 44 H -0.233 1.233 45 H 0.188 0.812 46 H 0.191 0.809 47 H 0.091 0.909 48 H 0.103 0.897 49 H 0.088 0.912 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -3.127 -3.932 -2.437 5.583 hybrid contribution -0.631 -0.145 0.180 0.672 sum -3.758 -4.077 -2.256 5.986 Atomic orbital electron populations 1.21818 0.90680 1.04209 1.03772 1.23223 0.96919 0.79530 1.02317 1.86518 1.24415 1.33263 1.83494 1.24463 0.80461 0.93504 0.70896 1.90668 1.61167 1.44606 1.46868 1.21279 0.96633 0.88045 1.03663 0.85876 1.21382 0.91523 0.97794 1.03001 1.21478 1.01167 0.93876 0.98001 1.21395 0.96056 0.93549 1.00092 0.89124 1.21436 1.00102 0.92570 0.85716 1.45792 1.55322 1.13516 1.21460 1.18337 0.78971 0.81934 0.86145 1.90808 1.40836 1.66464 1.47690 1.19986 1.03959 0.95665 0.95690 1.20897 0.96026 0.92995 0.94898 1.20263 1.02287 0.98140 0.95202 1.25067 0.94033 0.92894 1.06043 1.86476 1.29445 1.60103 1.59899 0.94355 0.84053 0.81838 0.73210 1.18023 0.98652 0.92653 0.82255 1.91555 1.90748 1.82126 1.46571 1.21396 1.02402 0.92588 1.00001 1.21491 0.93278 1.00766 0.90733 1.21622 0.93688 0.95587 1.03903 1.21503 1.01739 0.95879 0.95090 0.91070 0.88700 0.91324 0.91460 0.91723 0.91654 0.91926 0.90554 0.90589 0.91885 0.91800 0.74621 0.83981 0.86863 0.75287 1.18062 1.23310 0.81197 0.80866 0.90882 0.89656 0.91160 0.89935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.66 10.29 71.98 0.74 1.40 16 2 C 0.05 0.01 6.19 71.98 0.45 0.46 16 3 O -0.36 -0.80 10.12 -51.37 -0.52 -1.32 16 4 C 0.46 1.46 7.26 71.24 0.52 1.98 16 5 O -0.54 -5.45 15.73 21.97 0.35 -5.10 16 6 C -0.08 0.30 2.63 -11.54 -0.03 0.27 16 7 H 0.12 -0.78 8.14 -2.39 -0.02 -0.80 16 8 C -0.10 0.34 4.49 30.59 0.14 0.48 16 9 C -0.11 0.75 5.20 30.59 0.16 0.91 16 10 C -0.09 0.84 2.22 -10.80 -0.02 0.81 16 11 H 0.09 -0.92 8.14 -2.38 -0.02 -0.94 16 12 C 0.13 -0.64 5.07 86.38 0.44 -0.20 16 13 N -0.71 4.08 5.23 -466.09 -2.44 1.64 16 14 C 0.56 0.87 7.77 86.75 0.67 1.54 16 15 O -0.58 -6.29 16.34 -3.93 -0.06 -6.36 16 16 C -0.15 0.23 5.87 -20.09 -0.12 0.11 16 17 C -0.03 -0.03 8.78 22.52 0.20 0.17 16 18 C -0.16 -0.02 5.13 -19.86 -0.10 -0.12 16 19 C -0.07 -0.07 2.97 71.24 0.21 0.14 16 20 O -0.55 -0.91 11.64 -148.98 -1.73 -2.65 16 21 Si 0.76 -0.05 30.81 68.60 2.11 2.06 16 22 C 0.10 -0.09 6.68 22.47 0.15 0.06 16 23 F -0.13 -0.32 12.80 44.97 0.58 0.26 16 24 C -0.15 0.89 10.01 22.27 0.22 1.11 16 25 C -0.04 0.35 9.54 22.51 0.21 0.56 16 26 C -0.11 1.14 5.08 30.59 0.16 1.29 16 27 C -0.10 0.81 5.14 30.59 0.16 0.96 16 28 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 29 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 30 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 31 H 0.07 0.04 8.13 -2.39 -0.02 0.03 16 32 H 0.06 0.08 8.13 -2.39 -0.02 0.06 16 33 H 0.06 -0.09 8.10 -2.39 -0.02 -0.11 16 34 H 0.06 -0.03 8.10 -2.38 -0.02 -0.05 16 35 H 0.08 -0.51 8.14 -2.38 -0.02 -0.53 16 36 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 37 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.06 -0.16 8.14 -2.38 -0.02 -0.18 16 39 H 0.42 -5.17 5.68 -92.70 -0.53 -5.70 16 40 H 0.14 0.50 6.66 -2.91 -0.02 0.48 16 41 H 0.11 0.26 7.96 -2.39 -0.02 0.24 16 42 H 0.40 -2.46 8.43 -74.06 -0.62 -3.08 16 43 H -0.26 -1.05 5.27 99.48 0.52 -0.53 16 44 H -0.30 -2.29 7.11 99.48 0.71 -1.58 16 45 H 0.17 -1.85 8.06 -2.91 -0.02 -1.87 16 46 H 0.17 -2.73 6.40 -2.91 -0.02 -2.75 16 47 H 0.07 -0.69 8.14 -2.39 -0.02 -0.71 16 48 H 0.08 -1.11 7.18 -2.39 -0.02 -1.13 16 49 H 0.07 -0.51 8.14 -2.39 -0.02 -0.53 16 50 H 0.08 -0.63 8.11 -2.39 -0.02 -0.65 16 Total: 0.00 -24.11 405.87 2.10 -22.01 By element: Atomic # 1 Polarization: -22.15 SS G_CDS: -0.33 Total: -22.48 kcal Atomic # 6 Polarization: 7.79 SS G_CDS: 4.15 Total: 11.94 kcal Atomic # 7 Polarization: 4.08 SS G_CDS: -2.44 Total: 1.64 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: -1.97 Total: -15.43 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.58 Total: 0.26 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: 2.11 Total: 2.06 kcal Total: -24.11 2.10 -22.01 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_12496548.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -155.672 kcal (2) G-P(sol) polarization free energy of solvation -24.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.779 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.012 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds