Wall clock time and date at job start Sun Mar 7 2021 07:15:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45194 * 109.47456 * 2 1 4 4 C 1.34226 * 117.00487 * 180.02562 * 3 2 1 5 5 O 1.20828 * 119.99514 * 359.97438 * 4 3 2 6 6 C 1.50693 * 120.00533 * 180.02562 * 4 3 2 7 7 H 1.09002 * 109.47624 * 59.99295 * 6 4 3 8 8 C 1.53002 * 109.47531 * 179.97438 * 6 4 3 9 9 C 1.53000 * 109.47233 * 180.02562 * 8 6 4 10 10 C 1.52997 * 109.47060 * 299.99657 * 9 8 6 11 11 H 1.09002 * 109.47153 * 300.00319 * 10 9 8 12 12 C 1.52992 * 109.47482 * 180.02562 * 10 9 8 13 13 N 1.46505 * 109.47578 * 174.99814 * 12 10 9 14 14 C 1.34776 * 120.00162 * 180.02562 * 13 12 10 15 15 O 1.21573 * 119.99729 * 0.02562 * 14 13 12 16 16 C 1.47653 * 120.00005 * 180.02562 * 14 13 12 17 17 C 1.40168 * 119.97222 * 359.97438 * 16 14 13 18 18 C 1.36353 * 120.66730 * 179.97438 * 17 16 14 19 19 C 1.39325 * 120.23749 * 0.02562 * 18 17 16 20 20 N 1.37406 * 133.24794 * 179.97438 * 19 18 17 21 21 C 1.36867 * 109.97697 * 180.02562 * 20 19 18 22 22 C 1.34189 * 109.96618 * 359.97438 * 21 20 19 23 23 C 1.50701 * 126.53784 * 180.02562 * 22 21 20 24 24 O 1.42910 * 109.46964 * 254.97870 * 23 22 21 25 25 Si 1.86302 * 109.47128 * 14.97220 * 23 22 21 26 26 C 1.40903 * 119.64267 * 0.02562 * 19 18 17 27 27 C 1.39180 * 119.97366 * 179.72317 * 16 14 13 28 28 C 1.52999 * 109.47317 * 59.99960 * 10 9 8 29 29 C 1.52997 * 109.46989 * 299.99591 * 6 4 3 30 30 H 1.09000 * 109.47532 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47319 * 300.00114 * 1 2 3 32 32 H 1.08999 * 109.46933 * 59.99807 * 1 2 3 33 33 H 1.09002 * 109.47319 * 239.99886 * 2 1 3 34 34 H 1.08999 * 109.46933 * 120.00193 * 2 1 3 35 35 H 1.08992 * 109.47063 * 59.99724 * 8 6 4 36 36 H 1.09004 * 109.46733 * 299.99437 * 8 6 4 37 37 H 1.09002 * 109.47398 * 59.99826 * 9 8 6 38 38 H 1.09001 * 109.47194 * 180.02562 * 9 8 6 39 39 H 1.09001 * 109.47359 * 295.00205 * 12 10 9 40 40 H 1.09002 * 109.46906 * 55.00224 * 12 10 9 41 41 H 0.96998 * 119.99536 * 0.02562 * 13 12 10 42 42 H 1.08002 * 119.66577 * 359.96112 * 17 16 14 43 43 H 1.08001 * 119.88018 * 180.02562 * 18 17 16 44 44 H 0.96998 * 125.01275 * 359.97438 * 20 19 18 45 45 H 1.07998 * 125.01432 * 180.02562 * 21 20 19 46 46 H 1.08994 * 109.47452 * 134.97879 * 23 22 21 47 47 H 0.96701 * 114.00029 * 59.99869 * 24 23 22 48 48 H 1.48501 * 109.99731 * 58.68446 * 25 23 22 49 49 H 1.48500 * 110.00125 * 179.97438 * 25 23 22 50 50 H 1.08001 * 120.30619 * 0.02562 * 27 16 14 51 51 H 1.09000 * 109.47486 * 180.02562 * 28 10 9 52 52 H 1.09002 * 109.46716 * 60.00091 * 28 10 9 53 53 H 1.09002 * 109.47153 * 299.99998 * 29 6 4 54 54 H 1.09001 * 109.47289 * 60.00082 * 29 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5865 -0.0005 6 6 3.9208 2.9373 0.0000 7 1 3.5852 3.4690 0.8904 8 6 5.4487 2.8572 -0.0001 9 6 6.0335 4.2710 0.0011 10 6 5.5620 5.0190 -1.2475 11 1 5.8979 4.4876 -2.1380 12 6 6.1472 6.4326 -1.2467 13 7 5.7945 7.1080 -2.4981 14 6 6.2057 8.3720 -2.7207 15 8 6.8696 8.9516 -1.8833 16 6 5.8497 9.0529 -3.9816 17 6 5.0846 8.3839 -4.9468 18 6 4.7473 8.9992 -6.1159 19 6 5.1615 10.3058 -6.3660 20 7 4.9817 11.1642 -7.4237 21 6 5.6043 12.3563 -7.1695 22 6 6.1964 12.3165 -5.9660 23 6 6.9838 13.4251 -5.3163 24 8 8.3786 13.1214 -5.3835 25 14 6.6534 15.0268 -6.2086 26 6 5.9320 10.9888 -5.4041 27 6 6.2697 10.3603 -4.2085 28 6 4.0341 5.0991 -1.2475 29 6 3.4487 3.6849 -1.2486 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 1.8933 -0.5139 -0.8900 34 1 1.8933 -0.5139 0.8900 35 1 5.7846 2.3254 -0.8903 36 1 5.7847 2.3247 0.8897 37 1 5.6976 4.8024 0.8915 38 1 7.1220 4.2140 0.0005 39 1 5.7419 6.9932 -0.4045 40 1 7.2322 6.3765 -1.1575 41 1 5.2651 6.6453 -3.1663 42 1 4.7591 7.3706 -4.7628 43 1 4.1569 8.4720 -6.8507 44 1 4.4872 10.9559 -8.2318 45 1 5.6165 13.2040 -7.8385 46 1 6.6828 13.5215 -4.2732 47 1 8.7164 13.0213 -6.2840 48 1 5.2017 15.3377 -6.1734 49 1 7.4236 16.1283 -5.5772 50 1 6.8563 10.8809 -3.4660 51 1 3.6981 5.6316 -2.1373 52 1 3.6982 5.6305 -0.3571 53 1 3.7843 3.1532 -2.1390 54 1 2.3602 3.7420 -1.2481 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_13287722.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:07 Heat of formation + Delta-G solvation = -113.748727 kcal Electronic energy + Delta-G solvation = -34926.577962 eV Core-core repulsion = 30215.371443 eV Total energy + Delta-G solvation = -4711.206519 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.192 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.43940 -41.83490 -40.92751 -39.50074 -37.95113 -37.73268 -37.40513 -35.98239 -33.28919 -33.15561 -32.33942 -31.74578 -30.82606 -30.43561 -27.63426 -26.46256 -25.11353 -24.16657 -23.76484 -23.43381 -23.08550 -21.61987 -21.53706 -20.85488 -20.60363 -19.29967 -18.73400 -18.49786 -17.67847 -17.60774 -17.47530 -17.35112 -16.86414 -16.50592 -16.16352 -15.85594 -15.57599 -15.47321 -15.29920 -15.16406 -15.03951 -14.84367 -14.76481 -14.69677 -14.63070 -14.07670 -13.90714 -13.76602 -13.69042 -13.59523 -13.50660 -13.24230 -13.00155 -12.90097 -12.59832 -12.56127 -12.35703 -12.25165 -12.18489 -12.10850 -11.92734 -11.85796 -11.58376 -11.45240 -11.25614 -11.12336 -11.01385 -10.79133 -10.32282 -10.17701 -9.31144 -8.79237 -5.00600 -0.14839 0.21715 1.10192 1.36116 1.54038 1.63950 1.71572 1.85459 2.03853 2.11514 2.16140 2.89526 3.42096 3.58280 3.62127 3.65289 3.66259 3.75936 3.85033 3.88614 3.93938 3.95163 3.98074 4.03426 4.14038 4.17147 4.27676 4.31536 4.38214 4.38945 4.45697 4.46112 4.50601 4.55713 4.61183 4.65508 4.73386 4.79050 4.82455 4.85579 4.88299 4.96515 5.01009 5.08706 5.10858 5.12504 5.17462 5.22046 5.27751 5.31808 5.35203 5.38254 5.44055 5.49439 5.52714 5.59160 5.99864 6.50864 6.62136 6.66221 6.87907 7.18879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.463 3.537 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.124 0.876 8 C -0.098 4.098 9 C -0.107 4.107 10 C -0.091 4.091 11 H 0.089 0.911 12 C 0.125 3.875 13 N -0.709 5.709 14 C 0.558 3.442 15 O -0.592 6.592 16 C -0.179 4.179 17 C -0.068 4.068 18 C -0.124 4.124 19 C 0.110 3.890 20 N -0.571 5.571 21 C 0.087 3.913 22 C -0.228 4.228 23 C -0.054 4.054 24 O -0.566 6.566 25 Si 0.812 3.188 26 C -0.129 4.129 27 C -0.026 4.026 28 C -0.110 4.110 29 C -0.104 4.104 30 H 0.095 0.905 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.067 0.933 34 H 0.064 0.936 35 H 0.065 0.935 36 H 0.064 0.936 37 H 0.076 0.924 38 H 0.074 0.926 39 H 0.061 0.939 40 H 0.057 0.943 41 H 0.414 0.586 42 H 0.161 0.839 43 H 0.163 0.837 44 H 0.440 0.560 45 H 0.221 0.779 46 H 0.083 0.917 47 H 0.393 0.607 48 H -0.279 1.279 49 H -0.308 1.308 50 H 0.103 0.897 51 H 0.083 0.917 52 H 0.072 0.928 53 H 0.070 0.930 54 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.903 -0.702 -10.005 12.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.308 3.692 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.142 0.858 8 C -0.136 4.136 9 C -0.145 4.145 10 C -0.110 4.110 11 H 0.108 0.892 12 C 0.002 3.998 13 N -0.362 5.362 14 C 0.347 3.653 15 O -0.473 6.473 16 C -0.183 4.183 17 C -0.087 4.087 18 C -0.144 4.144 19 C 0.000 4.000 20 N -0.175 5.175 21 C -0.040 4.040 22 C -0.235 4.235 23 C -0.162 4.162 24 O -0.373 6.373 25 Si 0.716 3.284 26 C -0.134 4.134 27 C -0.045 4.045 28 C -0.148 4.148 29 C -0.141 4.141 30 H 0.113 0.887 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.085 0.915 34 H 0.083 0.917 35 H 0.084 0.916 36 H 0.082 0.918 37 H 0.094 0.906 38 H 0.093 0.907 39 H 0.080 0.920 40 H 0.076 0.924 41 H 0.253 0.747 42 H 0.178 0.822 43 H 0.180 0.820 44 H 0.281 0.719 45 H 0.237 0.763 46 H 0.100 0.900 47 H 0.243 0.757 48 H -0.206 1.206 49 H -0.236 1.236 50 H 0.121 0.879 51 H 0.102 0.898 52 H 0.091 0.909 53 H 0.089 0.911 54 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -6.700 0.170 -8.836 11.090 hybrid contribution -0.082 -1.002 0.693 1.221 sum -6.782 -0.833 -8.144 10.631 Atomic orbital electron populations 1.21819 0.90635 1.04228 1.03779 1.23230 0.96949 0.79499 1.02330 1.86516 1.24346 1.33307 1.83485 1.24411 0.80489 0.93413 0.70906 1.90668 1.61174 1.44563 1.46865 1.21267 0.96558 0.88152 1.03639 0.85829 1.21373 0.91610 0.97575 1.03063 1.21479 1.01105 0.94035 0.97906 1.21387 0.96206 0.93271 1.00131 0.89238 1.21420 0.99817 0.92778 0.85829 1.45754 1.55497 1.13494 1.21411 1.18492 0.78558 0.81914 0.86307 1.90766 1.41460 1.66888 1.48231 1.19595 1.06942 0.95555 0.96238 1.20877 0.95614 1.00355 0.91892 1.20076 1.03671 0.91494 0.99206 1.18632 0.99193 0.93226 0.88926 1.41780 1.46927 1.11105 1.17682 1.22238 0.95023 0.90101 0.96631 1.20857 1.09424 0.95488 0.97762 1.24765 0.82383 1.05422 1.03673 1.86490 1.21905 1.94194 1.34754 0.94053 0.77074 0.70842 0.86401 1.19223 1.03296 0.95757 0.95134 1.20589 0.95449 0.93359 0.95140 1.21623 0.93531 0.95774 1.03825 1.21506 1.01787 0.95662 0.95152 0.88657 0.91317 0.91066 0.91451 0.91709 0.91636 0.91771 0.90577 0.90707 0.92030 0.92419 0.74683 0.82170 0.81974 0.71895 0.76297 0.89965 0.75700 1.20550 1.23622 0.87865 0.89837 0.90887 0.91149 0.89745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.57 10.29 71.98 0.74 1.31 16 2 C 0.05 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.16 10.12 -51.38 -0.52 -1.68 16 4 C 0.46 2.04 7.25 71.23 0.52 2.55 16 5 O -0.54 -6.06 15.73 21.96 0.35 -5.72 16 6 C -0.08 0.17 2.63 -11.54 -0.03 0.14 16 7 H 0.12 -0.58 8.14 -2.39 -0.02 -0.60 16 8 C -0.10 0.14 4.49 30.60 0.14 0.27 16 9 C -0.11 0.44 5.20 30.59 0.16 0.60 16 10 C -0.09 0.50 2.22 -10.80 -0.02 0.48 16 11 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 12 C 0.13 -0.01 5.07 86.38 0.44 0.43 16 13 N -0.71 -0.20 5.23 -466.16 -2.44 -2.64 16 14 C 0.56 5.14 7.76 86.73 0.67 5.82 16 15 O -0.59 -11.31 16.33 -3.94 -0.06 -11.38 16 16 C -0.18 -1.17 5.87 -20.10 -0.12 -1.29 16 17 C -0.07 0.12 9.46 22.30 0.21 0.34 16 18 C -0.12 0.44 10.00 22.09 0.22 0.66 16 19 C 0.11 -0.02 7.27 39.18 0.28 0.27 16 20 N -0.57 3.87 6.05 -187.49 -1.13 2.73 16 21 C 0.09 -0.55 10.43 82.98 0.87 0.32 16 22 C -0.23 -0.40 5.58 -18.61 -0.10 -0.51 16 23 C -0.05 -0.15 3.06 71.24 0.22 0.07 16 24 O -0.57 -2.73 12.88 -148.98 -1.92 -4.65 16 25 Si 0.81 -2.59 30.76 68.60 2.11 -0.48 16 26 C -0.13 -0.82 6.34 -20.21 -0.13 -0.94 16 27 C -0.03 -0.27 9.64 22.74 0.22 -0.06 16 28 C -0.11 0.80 5.08 30.61 0.16 0.96 16 29 C -0.10 0.59 5.14 30.61 0.16 0.75 16 30 H 0.09 -0.63 8.14 -2.39 -0.02 -0.64 16 31 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 32 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 33 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 34 H 0.06 0.13 8.13 -2.39 -0.02 0.11 16 35 H 0.06 0.04 8.10 -2.39 -0.02 0.02 16 36 H 0.06 0.07 8.10 -2.39 -0.02 0.05 16 37 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 38 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 39 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 40 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 41 H 0.41 -2.76 5.66 -92.71 -0.52 -3.29 16 42 H 0.16 -1.53 6.36 -2.91 -0.02 -1.55 16 43 H 0.16 -1.72 8.06 -2.91 -0.02 -1.75 16 44 H 0.44 -6.18 8.96 -92.71 -0.83 -7.01 16 45 H 0.22 -3.39 6.35 -2.91 -0.02 -3.41 16 46 H 0.08 0.62 7.96 -2.39 -0.02 0.60 16 47 H 0.39 -1.90 8.70 -74.06 -0.64 -2.55 16 48 H -0.28 -0.16 7.11 99.48 0.71 0.55 16 49 H -0.31 -1.76 7.11 99.48 0.71 -1.05 16 50 H 0.10 1.66 7.64 -2.91 -0.02 1.64 16 51 H 0.08 -0.80 7.18 -2.39 -0.02 -0.81 16 52 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 53 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 54 H 0.08 -0.51 8.11 -2.39 -0.02 -0.53 16 Total: 0.00 -34.18 437.32 0.40 -33.78 By element: Atomic # 1 Polarization: -21.60 SS G_CDS: -1.02 Total: -22.61 kcal Atomic # 6 Polarization: 7.61 SS G_CDS: 5.04 Total: 12.65 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -3.57 Total: 0.09 kcal Atomic # 8 Polarization: -21.27 SS G_CDS: -2.16 Total: -23.43 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: 2.11 Total: -0.48 kcal Total: -34.18 0.40 -33.78 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13287722.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.973 kcal (2) G-P(sol) polarization free energy of solvation -34.176 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.776 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds