Wall clock time and date at job start Sun Mar 7 2021 07:15:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45198 * 109.46915 * 2 1 4 4 C 1.34238 * 116.99846 * 179.97438 * 3 2 1 5 5 O 1.20825 * 119.99397 * 0.02562 * 4 3 2 6 6 C 1.50690 * 119.99986 * 179.97438 * 4 3 2 7 7 H 1.09005 * 109.47434 * 300.00560 * 6 4 3 8 8 C 1.53007 * 109.47242 * 60.00069 * 6 4 3 9 9 C 1.52999 * 109.47378 * 179.97438 * 8 6 4 10 10 C 1.52995 * 109.47186 * 300.00347 * 9 8 6 11 11 H 1.09001 * 109.47634 * 299.99816 * 10 9 8 12 12 C 1.53005 * 109.47391 * 179.97438 * 10 9 8 13 13 N 1.46501 * 109.46612 * 65.00098 * 12 10 9 14 14 C 1.34780 * 119.99757 * 180.02562 * 13 12 10 15 15 O 1.21510 * 119.99908 * 0.02562 * 14 13 12 16 16 C 1.48171 * 119.99633 * 179.97438 * 14 13 12 17 17 N 1.32712 * 119.72577 * 0.02562 * 16 14 13 18 18 C 1.31524 * 121.64652 * 179.97438 * 17 16 14 19 19 C 1.38560 * 120.89865 * 0.02562 * 18 17 16 20 20 C 1.50704 * 120.32502 * 179.97438 * 19 18 17 21 21 O 1.42895 * 109.47197 * 119.99389 * 20 19 18 22 22 Si 1.86303 * 109.46959 * 359.97438 * 20 19 18 23 23 C 1.38627 * 119.35492 * 359.97438 * 19 18 17 24 24 C 1.38587 * 118.48695 * 0.02562 * 23 19 18 25 25 C 1.53006 * 109.47427 * 59.99919 * 10 9 8 26 26 C 1.52999 * 109.47003 * 300.00193 * 25 10 9 27 27 H 1.08994 * 109.47505 * 300.00084 * 1 2 3 28 28 H 1.09004 * 109.46965 * 59.99950 * 1 2 3 29 29 H 1.09004 * 109.47018 * 180.02562 * 1 2 3 30 30 H 1.08994 * 109.47505 * 239.99915 * 2 1 3 31 31 H 1.08996 * 109.46649 * 120.00000 * 2 1 3 32 32 H 1.09000 * 109.47220 * 300.00157 * 8 6 4 33 33 H 1.09005 * 109.46505 * 59.99922 * 8 6 4 34 34 H 1.08996 * 109.47100 * 180.02562 * 9 8 6 35 35 H 1.09002 * 109.47014 * 59.99847 * 9 8 6 36 36 H 1.09000 * 109.47070 * 305.00321 * 12 10 9 37 37 H 1.09001 * 109.47599 * 184.99644 * 12 10 9 38 38 H 0.97002 * 119.99927 * 359.97438 * 13 12 10 39 39 H 1.07995 * 119.55324 * 179.71437 * 18 17 16 40 40 H 1.09001 * 109.47003 * 240.00079 * 20 19 18 41 41 H 0.96703 * 114.00098 * 180.02562 * 21 20 19 42 42 H 1.48499 * 109.99814 * 60.00020 * 22 20 19 43 43 H 1.48491 * 110.00260 * 181.31865 * 22 20 19 44 44 H 1.08007 * 120.75557 * 180.02562 * 23 19 18 45 45 H 1.08003 * 120.47095 * 179.97438 * 24 23 19 46 46 H 1.09005 * 109.46698 * 59.99863 * 25 10 9 47 47 H 1.09000 * 109.47401 * 179.97438 * 25 10 9 48 48 H 1.08997 * 109.47090 * 180.02562 * 26 25 10 49 49 H 1.09010 * 109.46873 * 299.99844 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5449 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.5851 3.4691 -0.8904 8 6 3.4486 3.6851 1.2486 9 6 4.0338 5.0987 1.2484 10 6 5.5617 5.0181 1.2494 11 1 5.8970 4.4863 2.1398 12 6 6.1470 6.4318 1.2486 13 7 5.7937 7.1072 2.4996 14 6 6.2039 8.3717 2.7219 15 8 6.8663 8.9516 1.8843 16 6 5.8460 9.0551 3.9870 17 7 5.1219 8.4167 4.8977 18 6 4.7832 8.9867 6.0335 19 6 5.1730 10.2846 6.3223 20 6 4.7772 10.9254 7.6276 21 8 5.9520 11.2880 8.3558 22 14 3.7712 9.7204 8.6311 23 6 5.9305 10.9881 5.3987 24 6 6.2726 10.3623 4.2105 25 6 6.0339 4.2705 0.0008 26 6 5.4486 2.8568 0.0010 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 1.8934 -0.5138 -0.8899 31 1 1.8933 -0.5138 0.8900 32 1 2.3601 3.7421 1.2481 33 1 3.7842 3.1534 2.1390 34 1 3.6978 5.6312 2.1381 35 1 3.6987 5.6306 0.3579 36 1 5.7419 6.9923 0.4061 37 1 7.2320 6.3758 1.1598 38 1 5.2639 6.6447 3.1677 39 1 4.1891 8.4375 6.7488 40 1 4.1829 11.8173 7.4291 41 1 5.7725 11.7066 9.2089 42 1 4.5699 8.4995 8.9084 43 1 3.3478 10.3510 9.9070 44 1 6.2469 12.0009 5.6006 45 1 6.8615 10.8807 3.4682 46 1 5.6986 4.8024 -0.8897 47 1 7.1224 4.2135 0.0013 48 1 5.7853 2.3241 -0.8883 49 1 5.7838 2.3250 0.8915 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13287726.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:13 Heat of formation + Delta-G solvation = -132.974183 kcal Electronic energy + Delta-G solvation = -30052.001412 eV Core-core repulsion = 25751.951115 eV Total energy + Delta-G solvation = -4300.050297 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -41.84135 -41.66149 -40.36464 -39.38083 -38.05234 -37.55704 -35.90534 -34.05751 -33.08510 -32.94497 -32.19560 -31.82833 -28.50367 -27.03772 -25.00881 -24.73238 -23.89026 -23.66099 -22.99349 -21.66847 -21.59832 -20.81961 -19.23127 -18.78361 -18.60488 -18.11025 -17.55645 -17.50462 -16.94120 -16.71282 -16.50118 -16.17475 -15.94886 -15.59179 -15.37610 -15.24286 -14.96253 -14.93256 -14.65444 -14.43599 -14.27487 -14.06804 -14.04667 -13.85347 -13.70864 -13.51793 -13.34294 -13.04529 -12.84829 -12.60623 -12.58140 -12.29530 -12.19874 -12.14138 -11.87492 -11.58082 -11.46830 -11.33729 -11.19557 -11.12412 -11.07867 -10.78060 -10.58372 -10.27160 -9.99722 -5.13478 -0.53091 0.09659 1.06119 1.26307 1.44064 1.67924 1.69414 1.80508 2.05884 2.68739 2.94849 3.14342 3.40551 3.48978 3.53002 3.56527 3.68924 3.75235 3.83281 3.89676 3.90411 3.96525 4.01439 4.07005 4.19405 4.21464 4.22115 4.27894 4.30343 4.35432 4.39886 4.55645 4.59291 4.65360 4.71710 4.74010 4.81151 4.88107 4.89734 4.96928 4.98699 5.01050 5.02460 5.07598 5.10966 5.21287 5.32772 5.37860 5.44632 5.52975 6.22462 6.36164 6.66037 6.81407 7.18234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.110 4.110 9 C -0.114 4.114 10 C -0.103 4.103 11 H 0.082 0.918 12 C 0.121 3.879 13 N -0.710 5.710 14 C 0.572 3.428 15 O -0.529 6.529 16 C 0.080 3.920 17 N -0.452 5.452 18 C 0.106 3.894 19 C -0.103 4.103 20 C -0.076 4.076 21 O -0.535 6.535 22 Si 0.682 3.318 23 C -0.052 4.052 24 C -0.108 4.108 25 C -0.110 4.110 26 C -0.103 4.103 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.079 0.921 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.071 0.929 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.412 0.588 39 H 0.164 0.836 40 H 0.085 0.915 41 H 0.384 0.616 42 H -0.250 1.250 43 H -0.256 1.256 44 H 0.146 0.854 45 H 0.153 0.847 46 H 0.071 0.929 47 H 0.075 0.925 48 H 0.075 0.925 49 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.796 1.545 2.154 6.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.152 4.152 10 C -0.122 4.122 11 H 0.100 0.900 12 C -0.002 4.002 13 N -0.362 5.362 14 C 0.357 3.643 15 O -0.405 6.405 16 C -0.059 4.059 17 N -0.163 5.163 18 C -0.053 4.053 19 C -0.105 4.105 20 C -0.186 4.186 21 O -0.343 6.343 22 Si 0.582 3.418 23 C -0.078 4.078 24 C -0.129 4.129 25 C -0.148 4.148 26 C -0.141 4.141 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.099 0.901 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.098 0.902 33 H 0.088 0.912 34 H 0.091 0.909 35 H 0.090 0.910 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.248 0.752 39 H 0.181 0.819 40 H 0.102 0.898 41 H 0.233 0.767 42 H -0.174 1.174 43 H -0.180 1.180 44 H 0.164 0.836 45 H 0.170 0.830 46 H 0.090 0.910 47 H 0.093 0.907 48 H 0.094 0.906 49 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -5.146 0.041 1.537 5.371 hybrid contribution 0.702 1.225 1.243 1.881 sum -4.445 1.266 2.781 5.393 Atomic orbital electron populations 1.21819 0.92362 1.03224 1.03636 1.23064 0.95572 0.79981 1.02684 1.86509 1.24518 1.32616 1.83816 1.23823 0.80620 0.92737 0.72139 1.90684 1.60477 1.43205 1.45036 1.21161 0.96854 0.89592 1.02242 0.87183 1.21530 1.01562 0.95686 0.95999 1.21628 0.94228 0.96180 1.03159 1.21486 0.95921 0.94754 1.00025 0.89974 1.21505 1.00556 0.92024 0.86115 1.45841 1.55141 1.14082 1.21114 1.17825 0.79658 0.81725 0.85138 1.90819 1.38775 1.65635 1.45293 1.21168 0.97427 0.92792 0.94466 1.67524 1.10309 1.36827 1.01678 1.22535 0.97479 0.91364 0.93966 1.20535 0.99026 0.95328 0.95650 1.24730 0.93078 1.06090 0.94678 1.86577 1.29931 1.81966 1.35784 0.95128 0.85365 0.79227 0.82113 1.21527 0.93869 1.00762 0.91648 1.22208 0.98290 0.94502 0.97862 1.21512 1.01117 0.94798 0.97413 1.21439 0.91431 0.97181 1.04042 0.91373 0.91379 0.90062 0.91177 0.91171 0.90185 0.91174 0.90944 0.90999 0.90848 0.90923 0.75152 0.81894 0.89759 0.76701 1.17388 1.18023 0.83590 0.82951 0.91030 0.90651 0.90612 0.90743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.25 10.29 37.16 0.38 0.63 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.57 10.12 -39.28 -0.40 -0.97 16 4 C 0.46 0.93 7.25 36.00 0.26 1.19 16 5 O -0.51 -2.54 15.73 -18.75 -0.29 -2.84 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.17 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 8 C -0.11 0.23 5.14 -26.73 -0.14 0.09 16 9 C -0.11 0.32 5.08 -26.73 -0.14 0.18 16 10 C -0.10 0.25 2.23 -90.62 -0.20 0.05 16 11 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 12 C 0.12 -0.08 5.06 -4.04 -0.02 -0.10 16 13 N -0.71 -0.23 5.27 -61.14 -0.32 -0.55 16 14 C 0.57 1.71 7.81 -12.18 -0.10 1.62 16 15 O -0.53 -3.16 16.32 5.36 0.09 -3.07 16 16 C 0.08 0.17 6.75 -83.01 -0.56 -0.39 16 17 N -0.45 -0.57 9.54 -9.80 -0.09 -0.66 16 18 C 0.11 -0.01 9.84 -17.56 -0.17 -0.18 16 19 C -0.10 0.02 5.44 -104.36 -0.57 -0.55 16 20 C -0.08 0.14 2.82 36.01 0.10 0.25 16 21 O -0.53 0.27 12.75 -35.23 -0.45 -0.17 16 22 Si 0.68 -1.80 29.82 -169.99 -5.07 -6.87 16 23 C -0.05 -0.01 9.76 -39.31 -0.38 -0.39 16 24 C -0.11 -0.15 9.63 -39.05 -0.38 -0.52 16 25 C -0.11 0.25 5.20 -26.73 -0.14 0.11 16 26 C -0.10 0.09 4.49 -26.73 -0.12 -0.03 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.07 0.04 8.13 -51.93 -0.42 -0.39 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.08 -0.16 8.11 -51.93 -0.42 -0.59 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 34 H 0.07 -0.21 7.18 -51.93 -0.37 -0.59 16 35 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.41 -0.42 6.98 -40.82 -0.28 -0.70 16 39 H 0.16 -0.41 4.89 -52.49 -0.26 -0.67 16 40 H 0.08 -0.32 7.96 -51.93 -0.41 -0.73 16 41 H 0.38 -1.70 8.74 45.56 0.40 -1.30 16 42 H -0.25 -0.13 7.11 56.52 0.40 0.28 16 43 H -0.26 0.13 7.11 56.52 0.40 0.54 16 44 H 0.15 -0.20 8.06 -52.48 -0.42 -0.63 16 45 H 0.15 0.13 7.64 -52.48 -0.40 -0.27 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 49 H 0.07 0.01 8.10 -51.92 -0.42 -0.41 16 LS Contribution 401.00 15.07 6.04 6.04 Total: 0.00 -9.15 401.00 -10.38 -19.53 By element: Atomic # 1 Polarization: -4.76 SS G_CDS: -7.71 Total: -12.47 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -2.18 Total: 2.04 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -0.42 Total: -1.22 kcal Atomic # 8 Polarization: -6.00 SS G_CDS: -1.05 Total: -7.05 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.07 Total: -6.87 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -9.15 -10.38 -19.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13287726.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.447 kcal (2) G-P(sol) polarization free energy of solvation -9.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.381 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.527 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds