Wall clock time and date at job start Sun Mar 7 2021 07:15:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.45208 * 109.46666 * 2 1 4 4 C 1.34232 * 116.99618 * 180.02562 * 3 2 1 5 5 O 1.20826 * 120.00236 * 359.97438 * 4 3 2 6 6 C 1.50697 * 120.00079 * 180.02562 * 4 3 2 7 7 H 1.08998 * 109.46862 * 300.00390 * 6 4 3 8 8 C 1.53006 * 109.47239 * 59.99547 * 6 4 3 9 9 C 1.52997 * 109.47164 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46978 * 299.99874 * 9 8 6 11 11 H 1.08992 * 109.47056 * 300.00064 * 10 9 8 12 12 C 1.52997 * 109.46978 * 180.02562 * 10 9 8 13 13 N 1.46507 * 109.47321 * 65.00089 * 12 10 9 14 14 C 1.34772 * 120.00342 * 179.97438 * 13 12 10 15 15 O 1.21626 * 119.99868 * 0.02562 * 14 13 12 16 16 C 1.47259 * 119.99921 * 180.02562 * 14 13 12 17 17 C 1.36767 * 126.94314 * 359.68804 * 16 14 13 18 18 N 1.34663 * 108.39471 * 179.87136 * 17 16 14 19 19 C 1.46499 * 124.84739 * 180.13788 * 18 17 16 20 20 C 1.36440 * 110.29752 * 0.40836 * 18 17 16 21 21 C 1.50710 * 125.57015 * 179.73088 * 20 18 17 22 22 O 1.42896 * 109.47112 * 29.99768 * 21 20 18 23 23 Si 1.86301 * 109.47021 * 149.99987 * 21 20 18 24 24 C 1.34480 * 108.86159 * 359.74911 * 20 18 17 25 25 C 1.52996 * 109.46891 * 60.00410 * 10 9 8 26 26 C 1.52997 * 109.47466 * 179.97438 * 6 4 3 27 27 H 1.08998 * 109.46939 * 299.99720 * 1 2 3 28 28 H 1.08992 * 109.47077 * 59.99823 * 1 2 3 29 29 H 1.09003 * 109.46618 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.46939 * 240.00280 * 2 1 3 31 31 H 1.08996 * 109.47314 * 119.99461 * 2 1 3 32 32 H 1.09001 * 109.47002 * 60.00070 * 8 6 4 33 33 H 1.09000 * 109.47050 * 300.00336 * 8 6 4 34 34 H 1.09002 * 109.47045 * 180.02562 * 9 8 6 35 35 H 1.09001 * 109.47375 * 59.99966 * 9 8 6 36 36 H 1.08994 * 109.47445 * 185.00212 * 12 10 9 37 37 H 1.09000 * 109.47459 * 305.00519 * 12 10 9 38 38 H 0.97003 * 119.99307 * 0.02562 * 13 12 10 39 39 H 1.07996 * 125.80208 * 359.97438 * 17 16 14 40 40 H 1.08997 * 109.47216 * 270.30987 * 19 18 17 41 41 H 1.08999 * 109.47518 * 30.31288 * 19 18 17 42 42 H 1.09001 * 109.46748 * 150.31078 * 19 18 17 43 43 H 1.08997 * 109.46947 * 270.00241 * 21 20 18 44 44 H 0.96710 * 113.99937 * 60.00153 * 22 21 20 45 45 H 1.48500 * 109.99783 * 180.02562 * 23 21 20 46 46 H 1.48496 * 109.99837 * 301.31637 * 23 21 20 47 47 H 1.08004 * 126.84043 * 180.02562 * 24 20 18 48 48 H 1.09004 * 109.47368 * 179.97438 * 25 10 9 49 49 H 1.09001 * 109.47372 * 59.99964 * 25 10 9 50 50 H 1.09002 * 109.47153 * 59.99773 * 26 6 4 51 51 H 1.09001 * 109.46832 * 299.99964 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3691 0.0000 4 6 3.3447 1.5450 -0.0005 5 8 4.0808 0.5868 -0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5843 3.4702 -0.8895 8 6 3.4497 3.6838 1.2499 9 6 4.0339 5.0978 1.2501 10 6 5.5619 5.0183 1.2492 11 1 5.8985 4.4859 2.1387 12 6 6.1462 6.4323 1.2500 13 7 5.7939 7.1055 2.5027 14 6 6.2043 8.3695 2.7269 15 8 6.8667 8.9515 1.8892 16 6 5.8507 9.0459 3.9863 17 6 5.1124 8.5317 5.0164 18 7 5.0202 9.4666 5.9812 19 6 4.3088 9.2927 7.2500 20 6 5.6790 10.6009 5.6057 21 6 5.7890 11.8622 6.4232 22 8 5.7563 11.5331 7.8134 23 14 7.3934 12.7217 6.0260 24 6 6.2137 10.4097 4.3866 25 6 6.0329 4.2721 -0.0007 26 6 5.4486 2.8575 -0.0001 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 1.8934 -0.5137 0.8900 32 1 3.7860 3.1512 2.1395 33 1 2.3611 3.7408 1.2504 34 1 3.6987 5.6293 2.1408 35 1 3.6973 5.6303 0.3606 36 1 7.2310 6.3772 1.1597 37 1 5.7396 6.9940 0.4090 38 1 5.2659 6.6412 3.1709 39 1 4.6787 7.5432 5.0509 40 1 3.2716 9.6059 7.1308 41 1 4.3401 8.2434 7.5434 42 1 4.7854 9.8996 8.0198 43 1 4.9547 12.5225 6.1865 44 1 6.4717 10.9467 8.0957 45 1 7.5143 13.9667 6.8262 46 1 8.5375 11.8200 6.3145 47 1 6.7951 11.1188 3.8161 48 1 7.1214 4.2157 -0.0017 49 1 5.6962 4.8045 -0.8903 50 1 5.7845 2.3257 -0.8903 51 1 5.7846 2.3250 0.8896 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13287730.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:16 Heat of formation + Delta-G solvation = -120.475902 kcal Electronic energy + Delta-G solvation = -30869.790795 eV Core-core repulsion = 26542.970986 eV Total energy + Delta-G solvation = -4326.819810 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.47956 -41.72991 -40.37120 -39.28748 -38.02000 -37.57049 -35.71145 -33.84788 -33.14028 -32.37612 -31.87955 -31.27506 -28.20203 -27.21970 -26.18303 -24.72363 -23.91584 -23.59775 -22.84612 -21.61600 -21.07241 -20.85545 -20.41606 -19.08883 -18.63151 -17.58976 -17.57665 -17.49561 -16.94419 -16.84250 -16.63071 -16.33053 -15.91487 -15.66382 -15.45569 -15.29496 -15.00677 -14.97741 -14.83258 -14.58124 -14.39176 -14.11229 -13.89421 -13.78379 -13.55506 -13.50863 -13.38729 -13.31238 -13.14028 -12.99505 -12.84885 -12.60690 -12.35525 -12.29262 -12.21191 -11.93998 -11.85281 -11.59817 -11.49295 -11.24448 -11.14981 -10.96552 -10.72756 -9.96109 -9.54910 -9.21876 -4.93431 0.77298 1.03455 1.23436 1.44066 1.64576 1.66575 1.79013 2.03329 2.35664 2.73439 3.02024 3.38947 3.47341 3.51706 3.54579 3.75376 3.76320 3.84172 3.88794 3.93909 3.98804 4.03896 4.14651 4.16932 4.23948 4.26192 4.27668 4.34522 4.37166 4.39133 4.45688 4.54774 4.61769 4.65618 4.70715 4.75560 4.78486 4.89401 4.92214 4.93584 4.99202 4.99882 5.00328 5.08285 5.09414 5.19773 5.33360 5.50169 5.55287 5.68753 5.94695 6.13262 6.16395 6.68563 6.78593 7.50367 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.110 4.110 9 C -0.113 4.113 10 C -0.103 4.103 11 H 0.079 0.921 12 C 0.126 3.874 13 N -0.732 5.732 14 C 0.590 3.410 15 O -0.541 6.541 16 C -0.227 4.227 17 C 0.049 3.951 18 N -0.426 5.426 19 C 0.050 3.950 20 C -0.023 4.023 21 C -0.049 4.049 22 O -0.533 6.533 23 Si 0.712 3.288 24 C -0.130 4.130 25 C -0.111 4.111 26 C -0.103 4.103 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.068 0.932 33 H 0.079 0.921 34 H 0.069 0.931 35 H 0.072 0.928 36 H 0.070 0.930 37 H 0.070 0.930 38 H 0.396 0.604 39 H 0.169 0.831 40 H 0.075 0.925 41 H 0.081 0.919 42 H 0.111 0.889 43 H 0.122 0.878 44 H 0.378 0.622 45 H -0.253 1.253 46 H -0.257 1.257 47 H 0.158 0.842 48 H 0.075 0.925 49 H 0.071 0.929 50 H 0.075 0.925 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.257 -0.948 2.489 5.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.151 4.151 10 C -0.121 4.121 11 H 0.098 0.902 12 C 0.002 3.998 13 N -0.384 5.384 14 C 0.379 3.621 15 O -0.419 6.419 16 C -0.237 4.237 17 C -0.087 4.087 18 N -0.100 5.100 19 C -0.091 4.091 20 C -0.132 4.132 21 C -0.158 4.158 22 O -0.339 6.339 23 Si 0.611 3.389 24 C -0.154 4.154 25 C -0.149 4.149 26 C -0.141 4.141 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.097 0.903 34 H 0.087 0.913 35 H 0.091 0.909 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.230 0.770 39 H 0.186 0.814 40 H 0.093 0.907 41 H 0.100 0.900 42 H 0.129 0.871 43 H 0.140 0.860 44 H 0.226 0.774 45 H -0.178 1.178 46 H -0.181 1.181 47 H 0.175 0.825 48 H 0.094 0.906 49 H 0.090 0.910 50 H 0.094 0.906 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -3.509 -0.195 2.505 4.316 hybrid contribution -0.496 -1.529 1.189 1.999 sum -4.005 -1.724 3.694 5.714 Atomic orbital electron populations 1.21818 0.92359 1.03238 1.03626 1.23070 0.95573 0.79966 1.02694 1.86510 1.24527 1.32632 1.83819 1.23830 0.80617 0.92749 0.72152 1.90685 1.60460 1.43216 1.45019 1.21159 0.96912 0.89572 1.02202 0.87158 1.21533 1.01513 0.95759 0.95999 1.21618 0.94415 0.96005 1.03035 1.21477 0.95724 0.95081 0.99855 0.90214 1.21381 1.00350 0.91644 0.86419 1.45835 1.56998 1.14747 1.20846 1.17368 0.78719 0.80588 0.85445 1.90792 1.39225 1.65380 1.46473 1.20323 1.10194 0.96885 0.96294 1.21921 1.02458 0.95292 0.89063 1.43478 1.40069 1.11216 1.15283 1.22546 0.98070 1.04084 0.84402 1.20750 1.04001 0.90426 0.97974 1.24786 1.14377 0.95711 0.80943 1.86552 1.53442 1.70443 1.23506 0.94182 0.73727 0.80001 0.91022 1.21631 1.03687 0.95516 0.94520 1.21520 1.01155 0.94707 0.97498 1.21451 0.91369 0.97254 1.04010 0.91411 0.91358 0.90044 0.91142 0.91184 0.91284 0.90276 0.91284 0.90928 0.91212 0.91153 0.76994 0.81376 0.90670 0.90037 0.87132 0.85996 0.77401 1.17795 1.18077 0.82463 0.90629 0.91008 0.90616 0.90790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.27 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.51 10.12 -39.26 -0.40 -0.90 16 4 C 0.46 0.84 7.26 36.00 0.26 1.10 16 5 O -0.51 -2.45 15.73 -18.75 -0.29 -2.74 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.11 0.27 5.13 -26.73 -0.14 0.14 16 9 C -0.11 0.37 5.08 -26.73 -0.14 0.23 16 10 C -0.10 0.28 2.22 -90.62 -0.20 0.08 16 11 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 12 C 0.13 -0.09 5.07 -4.04 -0.02 -0.11 16 13 N -0.73 0.33 5.27 -61.44 -0.32 0.00 16 14 C 0.59 1.84 7.81 -12.60 -0.10 1.74 16 15 O -0.54 -3.90 16.97 5.25 0.09 -3.81 16 16 C -0.23 -0.41 6.29 -103.35 -0.65 -1.06 16 17 C 0.05 -0.04 10.83 -16.84 -0.18 -0.22 16 18 N -0.43 0.31 3.09 -119.90 -0.37 -0.06 16 19 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 20 C -0.02 0.00 6.14 -81.87 -0.50 -0.51 16 21 C -0.05 0.05 2.98 36.01 0.11 0.16 16 22 O -0.53 0.52 9.95 -35.23 -0.35 0.17 16 23 Si 0.71 -0.75 31.12 -169.99 -5.29 -6.04 16 24 C -0.13 -0.21 9.49 -37.50 -0.36 -0.56 16 25 C -0.11 0.26 5.21 -26.71 -0.14 0.13 16 26 C -0.10 0.11 4.50 -26.71 -0.12 -0.01 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 32 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.08 -0.19 8.11 -51.93 -0.42 -0.61 16 34 H 0.07 -0.27 7.18 -51.93 -0.37 -0.64 16 35 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.40 -1.25 6.60 -40.82 -0.27 -1.52 16 39 H 0.17 -0.73 7.45 -52.49 -0.39 -1.12 16 40 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.08 -0.39 8.13 -51.93 -0.42 -0.81 16 42 H 0.11 -0.35 4.93 -51.93 -0.26 -0.60 16 43 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 44 H 0.38 -1.28 8.38 45.56 0.38 -0.90 16 45 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 46 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 47 H 0.16 0.11 6.89 -52.48 -0.36 -0.26 16 48 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 49 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 50 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 51 H 0.07 -0.01 8.10 -51.93 -0.42 -0.43 16 LS Contribution 410.10 15.07 6.18 6.18 Total: 0.00 -10.20 410.10 -10.40 -20.61 By element: Atomic # 1 Polarization: -7.26 SS G_CDS: -8.48 Total: -15.74 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -1.16 Total: 2.33 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.69 Total: -0.06 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -0.95 Total: -7.28 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.29 Total: -6.04 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -10.20 -10.40 -20.61 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13287730.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.870 kcal (2) G-P(sol) polarization free energy of solvation -10.203 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.073 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.403 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.606 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds