Wall clock time and date at job start Sun Mar 7 2021 07:15:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45195 * 109.47423 * 2 1 4 4 C 1.34231 * 117.00446 * 180.02562 * 3 2 1 5 5 O 1.20827 * 119.99585 * 359.97438 * 4 3 2 6 6 C 1.50699 * 120.00242 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.46959 * 299.99641 * 6 4 3 8 8 C 1.53005 * 109.47155 * 59.99333 * 6 4 3 9 9 C 1.52999 * 109.47159 * 179.97438 * 8 6 4 10 10 C 1.52997 * 109.47317 * 300.00546 * 9 8 6 11 11 H 1.09002 * 109.47153 * 299.99641 * 10 9 8 12 12 C 1.53002 * 109.46817 * 179.97438 * 10 9 8 13 13 N 1.46494 * 109.47345 * 65.00126 * 12 10 9 14 14 C 1.34772 * 120.00365 * 179.97438 * 13 12 10 15 15 O 1.21559 * 119.99472 * 359.97438 * 14 13 12 16 16 C 1.47837 * 120.00342 * 179.97438 * 14 13 12 17 17 C 1.39513 * 120.55824 * 359.72115 * 16 14 13 18 18 N 1.31704 * 120.56663 * 179.72316 * 17 16 14 19 19 C 1.31920 * 121.87654 * 0.54879 * 18 17 16 20 20 C 1.38354 * 121.08455 * 359.73780 * 19 18 17 21 21 C 1.50699 * 120.35272 * 180.02562 * 20 19 18 22 22 O 1.42908 * 109.47009 * 244.98119 * 21 20 19 23 23 Si 1.86300 * 109.47011 * 4.97834 * 21 20 19 24 24 C 1.38366 * 119.29968 * 359.97438 * 20 19 18 25 25 C 1.53000 * 109.47060 * 59.99960 * 10 9 8 26 26 C 1.52997 * 109.47078 * 179.97438 * 6 4 3 27 27 H 1.09002 * 109.47148 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.46961 * 300.00137 * 1 2 3 29 29 H 1.08999 * 109.46966 * 60.00314 * 1 2 3 30 30 H 1.09000 * 109.47188 * 239.99396 * 2 1 3 31 31 H 1.08999 * 109.46966 * 119.99686 * 2 1 3 32 32 H 1.09000 * 109.47360 * 300.00319 * 8 6 4 33 33 H 1.09002 * 109.46935 * 60.00293 * 8 6 4 34 34 H 1.08996 * 109.46929 * 179.97438 * 9 8 6 35 35 H 1.09002 * 109.46716 * 60.00455 * 9 8 6 36 36 H 1.09008 * 109.46873 * 184.99985 * 12 10 9 37 37 H 1.08997 * 109.47047 * 304.99674 * 12 10 9 38 38 H 0.97008 * 119.99803 * 359.97438 * 13 12 10 39 39 H 1.08005 * 119.72032 * 359.97438 * 17 16 14 40 40 H 1.08008 * 119.46018 * 179.72473 * 19 18 17 41 41 H 1.08996 * 109.47000 * 124.98027 * 21 20 19 42 42 H 0.96699 * 113.99393 * 179.97438 * 22 21 20 43 43 H 1.48493 * 110.00087 * 178.68154 * 23 21 20 44 44 H 1.48499 * 109.99967 * 300.00321 * 23 21 20 45 45 H 1.07994 * 120.85321 * 179.97438 * 24 20 19 46 46 H 1.08992 * 109.47399 * 59.99823 * 25 10 9 47 47 H 1.09004 * 109.46724 * 180.02562 * 25 10 9 48 48 H 1.08993 * 109.47194 * 59.99505 * 26 6 4 49 49 H 1.09002 * 109.46695 * 299.99519 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9208 2.9373 -0.0012 7 1 3.5846 3.4692 -0.8912 8 6 3.4496 3.6848 1.2480 9 6 4.0349 5.0984 1.2477 10 6 5.5628 5.0178 1.2475 11 1 5.8987 4.4857 2.1376 12 6 6.1480 6.4314 1.2466 13 7 5.7957 7.1067 2.4979 14 6 6.2068 8.3707 2.7206 15 8 6.8704 8.9503 1.8831 16 6 5.8508 9.0523 3.9832 17 6 5.0849 8.4001 4.9498 18 7 4.7722 9.0053 6.0770 19 6 5.1550 10.2414 6.3336 20 6 5.9119 10.9581 5.4239 21 6 6.3407 12.3691 5.7343 22 8 5.7206 13.2689 4.8133 23 14 5.8272 12.8064 7.4709 24 6 6.2719 10.3654 4.2266 25 6 6.0339 4.2704 -0.0017 26 6 5.4487 2.8572 -0.0010 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.8934 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8900 32 1 2.3611 3.7418 1.2483 33 1 3.7858 3.1529 2.1381 34 1 3.6988 5.6309 2.1373 35 1 3.6990 5.6304 0.3576 36 1 7.2329 6.3755 1.1569 37 1 5.7423 6.9920 0.4045 38 1 5.2665 6.6439 3.1664 39 1 4.7488 7.3889 4.7740 40 1 4.8727 10.7016 7.2691 41 1 7.4242 12.4474 5.6451 42 1 5.9519 14.1971 4.9544 43 1 6.2723 14.1842 7.8004 44 1 4.3519 12.7033 7.6054 45 1 6.8619 10.9019 3.4984 46 1 5.6980 4.8024 -0.8917 47 1 7.1224 4.2126 -0.0015 48 1 5.7847 2.3246 -0.8907 49 1 5.7845 2.3256 0.8893 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13287814.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:29 Heat of formation + Delta-G solvation = -131.598785 kcal Electronic energy + Delta-G solvation = -30075.318677 eV Core-core repulsion = 25775.328022 eV Total energy + Delta-G solvation = -4299.990656 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.90481 -41.69825 -40.44166 -39.43464 -38.04738 -37.59710 -36.01000 -33.86875 -33.66650 -32.88032 -32.13030 -31.88168 -27.99343 -27.31851 -25.62700 -24.44283 -23.96505 -23.70175 -23.13980 -21.70430 -21.50014 -20.82497 -19.05320 -18.73643 -18.64528 -18.06964 -17.92010 -17.59274 -17.51269 -16.71315 -16.52581 -16.21876 -15.92620 -15.55627 -15.41865 -15.27260 -14.99176 -14.82664 -14.75066 -14.54608 -14.24455 -14.15132 -13.93426 -13.90619 -13.77327 -13.58159 -13.41717 -13.10534 -12.88441 -12.71675 -12.61142 -12.35817 -12.26525 -12.10613 -11.94069 -11.64373 -11.49989 -11.35633 -11.25375 -11.15824 -11.02375 -10.74966 -10.50676 -10.34095 -10.13127 -5.10492 -0.54716 0.00865 1.09286 1.22543 1.46125 1.65772 1.74343 1.81657 1.97706 2.61437 3.00036 3.17875 3.34054 3.42041 3.49031 3.52138 3.62939 3.67917 3.75898 3.77455 3.83422 3.93882 3.97889 4.00979 4.06300 4.14346 4.19102 4.21550 4.27138 4.28786 4.33288 4.39599 4.52987 4.58955 4.65869 4.70545 4.78962 4.82292 4.85123 4.89435 4.92650 4.95441 4.99821 5.00556 5.05342 5.14273 5.23198 5.30028 5.35310 5.49748 6.28376 6.32073 6.64703 6.77810 7.07629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.111 4.111 9 C -0.115 4.115 10 C -0.104 4.104 11 H 0.082 0.918 12 C 0.123 3.877 13 N -0.724 5.724 14 C 0.565 3.435 15 O -0.529 6.529 16 C -0.189 4.189 17 C 0.139 3.861 18 N -0.477 5.477 19 C 0.130 3.870 20 C -0.132 4.132 21 C -0.073 4.073 22 O -0.534 6.534 23 Si 0.683 3.317 24 C 0.012 3.988 25 C -0.111 4.111 26 C -0.103 4.103 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.080 0.920 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.073 0.927 38 H 0.400 0.600 39 H 0.161 0.839 40 H 0.164 0.836 41 H 0.083 0.917 42 H 0.384 0.616 43 H -0.255 1.255 44 H -0.250 1.250 45 H 0.151 0.849 46 H 0.071 0.929 47 H 0.075 0.925 48 H 0.076 0.924 49 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.894 -0.437 2.775 2.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.148 4.148 9 C -0.152 4.152 10 C -0.122 4.122 11 H 0.101 0.899 12 C 0.000 4.000 13 N -0.377 5.377 14 C 0.351 3.649 15 O -0.406 6.406 16 C -0.194 4.194 17 C -0.020 4.020 18 N -0.184 5.184 19 C -0.026 4.026 20 C -0.134 4.134 21 C -0.183 4.183 22 O -0.342 6.342 23 Si 0.584 3.416 24 C -0.014 4.014 25 C -0.148 4.148 26 C -0.141 4.141 27 H 0.100 0.900 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.098 0.902 33 H 0.089 0.911 34 H 0.088 0.912 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.092 0.908 38 H 0.236 0.764 39 H 0.178 0.822 40 H 0.180 0.820 41 H 0.101 0.899 42 H 0.233 0.767 43 H -0.179 1.179 44 H -0.174 1.174 45 H 0.169 0.831 46 H 0.090 0.910 47 H 0.094 0.906 48 H 0.094 0.906 49 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -1.441 -0.826 3.054 3.476 hybrid contribution 0.216 0.910 -1.166 1.495 sum -1.225 0.084 1.887 2.252 Atomic orbital electron populations 1.21821 0.92345 1.03253 1.03637 1.23071 0.95583 0.79931 1.02704 1.86505 1.24496 1.32674 1.83796 1.23806 0.80641 0.92715 0.72175 1.90687 1.60473 1.43194 1.45012 1.21156 0.96874 0.89637 1.02194 0.87182 1.21532 1.01613 0.95613 0.96076 1.21633 0.94275 0.96245 1.03076 1.21499 0.95835 0.94765 1.00141 0.89932 1.21483 1.00642 0.91917 0.85943 1.45900 1.56122 1.14359 1.21302 1.17980 0.79555 0.81403 0.85957 1.90823 1.38440 1.65285 1.46005 1.21010 1.04546 0.96765 0.97069 1.23019 0.91623 0.99322 0.88040 1.67750 1.20695 1.09900 1.20076 1.22885 0.91124 0.90177 0.98399 1.20295 1.00937 0.95962 0.96168 1.24708 1.00307 0.88376 1.04935 1.86591 1.72596 1.20335 1.54706 0.95099 0.83046 0.85585 0.77911 1.21610 0.92814 0.92012 0.94966 1.21501 1.01168 0.94814 0.97363 1.21432 0.91408 0.97163 1.04099 0.90030 0.91377 0.91377 0.91153 0.91149 0.90160 0.91136 0.91227 0.90912 0.90821 0.90847 0.76402 0.82186 0.81981 0.89883 0.76746 1.17938 1.17435 0.83148 0.91011 0.90584 0.90566 0.90707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.65 16 2 C 0.06 0.01 6.19 37.16 0.23 0.24 16 3 O -0.36 -0.49 10.12 -39.26 -0.40 -0.89 16 4 C 0.46 0.78 7.26 36.01 0.26 1.04 16 5 O -0.51 -2.38 15.73 -18.75 -0.29 -2.67 16 6 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 7 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 8 C -0.11 0.30 5.14 -26.73 -0.14 0.16 16 9 C -0.11 0.42 5.08 -26.73 -0.14 0.28 16 10 C -0.10 0.35 2.23 -90.62 -0.20 0.15 16 11 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 12 C 0.12 -0.21 5.06 -4.04 -0.02 -0.23 16 13 N -0.72 1.06 5.24 -61.25 -0.32 0.74 16 14 C 0.56 1.03 7.78 -12.34 -0.10 0.93 16 15 O -0.53 -3.01 16.42 5.31 0.09 -2.92 16 16 C -0.19 -0.19 5.89 -104.82 -0.62 -0.81 16 17 C 0.14 -0.04 10.71 -17.13 -0.18 -0.23 16 18 N -0.48 -0.57 10.35 -12.91 -0.13 -0.70 16 19 C 0.13 0.05 9.84 -17.47 -0.17 -0.12 16 20 C -0.13 -0.08 5.39 -104.53 -0.56 -0.64 16 21 C -0.07 0.08 2.81 36.01 0.10 0.18 16 22 O -0.53 -0.24 12.82 -35.23 -0.45 -0.69 16 23 Si 0.68 -1.45 29.88 -169.99 -5.08 -6.53 16 24 C 0.01 0.02 9.38 -38.86 -0.36 -0.34 16 25 C -0.11 0.32 5.20 -26.75 -0.14 0.18 16 26 C -0.10 0.15 4.49 -26.76 -0.12 0.03 16 27 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 32 H 0.08 -0.20 8.11 -51.93 -0.42 -0.62 16 33 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.07 -0.30 7.18 -51.93 -0.37 -0.67 16 35 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 36 H 0.07 -0.06 8.14 -51.92 -0.42 -0.48 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.40 -1.62 5.72 -40.82 -0.23 -1.86 16 39 H 0.16 -0.60 6.42 -52.48 -0.34 -0.93 16 40 H 0.16 -0.27 4.87 -52.48 -0.26 -0.52 16 41 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 42 H 0.38 -1.38 8.74 45.56 0.40 -0.98 16 43 H -0.25 0.02 7.11 56.52 0.40 0.43 16 44 H -0.25 -0.20 7.05 56.52 0.40 0.20 16 45 H 0.15 0.30 7.74 -52.49 -0.41 -0.10 16 46 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 47 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 48 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 49 H 0.07 -0.04 8.10 -51.93 -0.42 -0.46 16 LS Contribution 398.84 15.07 6.01 6.01 Total: 0.00 -10.22 398.84 -10.18 -20.39 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -7.58 Total: -14.08 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -2.02 Total: 1.34 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.45 Total: 0.04 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -1.06 Total: -7.17 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.22 -10.18 -20.39 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13287814.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.206 kcal (2) G-P(sol) polarization free energy of solvation -10.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.392 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds