Wall clock time and date at job start Sun Mar 7 2021 07:15:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45203 * 109.47096 * 2 1 4 4 C 1.34229 * 116.99579 * 179.97438 * 3 2 1 5 5 O 1.20819 * 120.00672 * 359.97438 * 4 3 2 6 6 C 1.50703 * 119.99682 * 179.97438 * 4 3 2 7 7 H 1.09002 * 109.47152 * 59.99843 * 6 4 3 8 8 C 1.53005 * 109.47304 * 179.97438 * 6 4 3 9 9 C 1.52997 * 109.47452 * 180.02562 * 8 6 4 10 10 C 1.53002 * 109.46817 * 300.00239 * 9 8 6 11 11 H 1.08992 * 109.47063 * 299.99823 * 10 9 8 12 12 C 1.53001 * 109.46637 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.47094 * 65.00239 * 12 10 9 14 14 C 1.34777 * 120.00297 * 179.97438 * 13 12 10 15 15 O 1.21622 * 119.99659 * 0.02562 * 14 13 12 16 16 C 1.47374 * 120.00514 * 179.97438 * 14 13 12 17 17 C 1.36418 * 127.19509 * 179.70972 * 16 14 13 18 18 C 1.50699 * 125.80007 * 0.02562 * 17 16 14 19 19 O 1.33653 * 108.39380 * 179.89664 * 17 16 14 20 20 C 1.34210 * 110.90954 * 0.38806 * 19 17 16 21 21 C 1.50712 * 125.43511 * 179.76331 * 20 19 17 22 22 O 1.42903 * 109.46973 * 119.99968 * 21 20 19 23 23 Si 1.86295 * 109.47101 * 359.97438 * 21 20 19 24 24 C 1.34175 * 109.12988 * 359.76216 * 20 19 17 25 25 C 1.53000 * 109.47233 * 60.00194 * 10 9 8 26 26 C 1.52997 * 109.47060 * 299.99657 * 25 10 9 27 27 H 1.08993 * 109.47027 * 300.00255 * 1 2 3 28 28 H 1.09000 * 109.46905 * 59.99996 * 1 2 3 29 29 H 1.08998 * 109.47049 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47476 * 240.00007 * 2 1 3 31 31 H 1.09000 * 109.46905 * 120.00003 * 2 1 3 32 32 H 1.09002 * 109.46935 * 59.99966 * 8 6 4 33 33 H 1.09001 * 109.46812 * 300.00308 * 8 6 4 34 34 H 1.08993 * 109.47194 * 179.97438 * 9 8 6 35 35 H 1.09002 * 109.46695 * 59.99734 * 9 8 6 36 36 H 1.09008 * 109.46864 * 185.00001 * 12 10 9 37 37 H 1.09000 * 109.47679 * 305.00033 * 12 10 9 38 38 H 0.97004 * 120.00359 * 359.97438 * 13 12 10 39 39 H 1.09004 * 109.46897 * 90.00049 * 18 17 16 40 40 H 1.08995 * 109.46950 * 210.00075 * 18 17 16 41 41 H 1.08997 * 109.47161 * 330.00256 * 18 17 16 42 42 H 1.09002 * 109.47001 * 239.99850 * 21 20 19 43 43 H 0.96700 * 113.99940 * 299.99540 * 22 21 20 44 44 H 1.48496 * 110.00130 * 180.02562 * 23 21 20 45 45 H 1.48507 * 110.00090 * 301.31996 * 23 21 20 46 46 H 1.07996 * 127.02787 * 179.97438 * 24 20 19 47 47 H 1.09002 * 109.47398 * 59.99826 * 25 10 9 48 48 H 1.09001 * 109.47194 * 180.02562 * 25 10 9 49 49 H 1.08996 * 109.47853 * 180.02562 * 26 25 10 50 50 H 1.09002 * 109.47153 * 300.00319 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0000 7 1 3.5844 3.4701 0.8895 8 6 5.4487 2.8573 0.0014 9 6 6.0336 4.2711 0.0015 10 6 5.5631 5.0176 -1.2484 11 1 5.8998 4.4852 -2.1379 12 6 6.1475 6.4317 -1.2480 13 7 7.6057 6.3574 -1.3668 14 6 8.3386 7.4883 -1.3881 15 8 7.7893 8.5705 -1.3083 16 6 9.8057 7.4137 -1.5071 17 6 10.6838 8.4568 -1.5484 18 6 10.3211 9.9178 -1.4787 19 8 11.9208 7.9626 -1.6582 20 6 11.8987 6.6214 -1.7004 21 6 13.1083 5.7311 -1.8262 22 8 13.1852 4.8686 -0.6894 23 14 14.6450 6.7804 -1.9155 24 6 10.6281 6.1995 -1.6126 25 6 4.0352 5.0978 -1.2498 26 6 3.4504 3.6840 -1.2499 27 1 -0.3633 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 1.8934 -0.5138 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 5.7855 2.3245 -0.8879 33 1 5.7838 2.3258 0.8921 34 1 7.1220 4.2140 0.0030 35 1 5.6968 4.8035 0.8910 36 1 5.7424 6.9925 -2.0904 37 1 5.8839 6.9335 -0.3170 38 1 8.0440 5.4943 -1.4301 39 1 10.3156 10.2416 -0.4379 40 1 11.0535 10.5010 -2.0368 41 1 9.3318 10.0675 -1.9110 42 1 13.0252 5.1312 -2.7325 43 1 13.2610 5.3354 0.1541 44 1 15.8448 5.9143 -2.0403 45 1 14.5629 7.7038 -3.0756 46 1 10.2804 5.1771 -1.6186 47 1 3.6985 5.6302 -0.3602 48 1 3.7000 5.6292 -2.1405 49 1 2.3619 3.7410 -1.2513 50 1 3.7871 3.1516 -2.1394 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13308374.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:33 Heat of formation + Delta-G solvation = -161.144769 kcal Electronic energy + Delta-G solvation = -31100.918891 eV Core-core repulsion = 26674.616884 eV Total energy + Delta-G solvation = -4426.302006 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.72837 -41.74170 -40.58836 -39.42280 -38.10266 -37.58242 -35.89163 -34.15818 -33.24272 -32.92014 -32.29174 -31.85644 -29.49773 -27.79259 -25.77983 -24.81641 -24.18439 -23.65660 -23.15907 -21.94653 -21.69170 -20.98021 -20.51157 -18.95448 -18.63331 -17.93611 -17.67514 -17.58130 -17.50664 -16.89216 -16.69354 -16.43443 -15.94375 -15.75641 -15.70835 -15.33169 -15.07922 -14.89207 -14.62429 -14.53527 -14.25583 -14.14263 -14.00328 -13.93807 -13.85491 -13.71096 -13.55194 -13.34366 -13.15769 -12.90909 -12.90033 -12.82272 -12.57087 -12.29559 -12.26834 -12.15620 -11.89428 -11.60981 -11.49022 -11.29976 -11.15458 -10.96591 -10.86638 -10.65180 -10.06981 -9.53941 -5.08552 0.32132 0.84917 1.10472 1.23276 1.40570 1.66501 1.74136 1.88801 2.20853 2.39467 3.14207 3.35915 3.37466 3.47869 3.50301 3.72084 3.78367 3.81883 3.89720 3.95349 3.97394 4.00973 4.13234 4.16508 4.22397 4.24021 4.28226 4.31197 4.35292 4.41888 4.55493 4.56931 4.60285 4.64260 4.70044 4.74422 4.79428 4.82034 4.82628 4.94147 4.96327 5.00113 5.03874 5.06011 5.11449 5.16308 5.22615 5.29428 5.45541 5.50235 5.92315 6.32887 6.51114 6.78456 7.26202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.104 4.104 9 C -0.114 4.114 10 C -0.103 4.103 11 H 0.080 0.920 12 C 0.125 3.875 13 N -0.724 5.724 14 C 0.592 3.408 15 O -0.540 6.540 16 C -0.253 4.253 17 C 0.095 3.905 18 C -0.086 4.086 19 O -0.168 6.168 20 C -0.056 4.056 21 C -0.028 4.028 22 O -0.530 6.530 23 Si 0.703 3.297 24 C -0.149 4.149 25 C -0.110 4.110 26 C -0.110 4.110 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.069 0.931 35 H 0.070 0.930 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.401 0.599 39 H 0.093 0.907 40 H 0.081 0.919 41 H 0.110 0.890 42 H 0.133 0.867 43 H 0.384 0.616 44 H -0.247 1.247 45 H -0.253 1.253 46 H 0.157 0.843 47 H 0.073 0.927 48 H 0.075 0.925 49 H 0.081 0.919 50 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.944 0.599 1.365 1.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.142 4.142 9 C -0.152 4.152 10 C -0.122 4.122 11 H 0.099 0.901 12 C 0.002 3.998 13 N -0.375 5.375 14 C 0.380 3.620 15 O -0.419 6.419 16 C -0.258 4.258 17 C 0.041 3.959 18 C -0.142 4.142 19 O -0.065 6.065 20 C -0.104 4.104 21 C -0.138 4.138 22 O -0.336 6.336 23 Si 0.603 3.397 24 C -0.168 4.168 25 C -0.147 4.147 26 C -0.147 4.147 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.088 0.912 35 H 0.089 0.911 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.236 0.764 39 H 0.112 0.888 40 H 0.100 0.900 41 H 0.129 0.871 42 H 0.150 0.850 43 H 0.232 0.768 44 H -0.171 1.171 45 H -0.177 1.177 46 H 0.175 0.825 47 H 0.091 0.909 48 H 0.093 0.907 49 H 0.099 0.901 50 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.237 0.966 0.466 1.099 hybrid contribution -0.496 -1.249 -0.264 1.370 sum -0.733 -0.283 0.202 0.811 Atomic orbital electron populations 1.21818 0.92337 1.03246 1.03647 1.23073 0.95593 0.79941 1.02691 1.86508 1.24488 1.32657 1.83795 1.23809 0.80642 0.92717 0.72154 1.90683 1.60467 1.43211 1.45038 1.21155 0.96816 0.89644 1.02232 0.87170 1.21452 0.91526 0.97244 1.03959 1.21630 1.00664 0.94964 0.97933 1.21486 0.96247 0.95030 0.99439 0.90125 1.21430 0.78956 0.96754 1.02697 1.45785 1.07601 1.08776 1.75387 1.17151 0.85005 0.83990 0.75820 1.90783 1.72733 1.27908 1.50462 1.21130 0.94061 0.93155 1.17418 1.22921 0.80440 0.96615 0.95894 1.20698 1.04098 0.84840 1.04595 1.83672 1.30447 1.21281 1.71113 1.22614 0.97912 0.80751 1.09170 1.24407 1.01185 0.95534 0.92692 1.86563 1.96073 1.34472 1.16461 0.94191 0.75702 0.80440 0.89368 1.22572 0.91396 0.98640 1.04226 1.21496 0.93515 0.96366 1.03371 1.21518 1.01630 0.95600 0.95980 0.91362 0.91375 0.90038 0.91168 0.91156 0.90799 0.90699 0.91206 0.91092 0.91086 0.91011 0.76435 0.88846 0.90028 0.87142 0.85009 0.76779 1.17086 1.17712 0.82489 0.90863 0.90663 0.90071 0.91197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.25 10.29 37.16 0.38 0.63 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.56 10.12 -39.25 -0.40 -0.96 16 4 C 0.46 0.90 7.26 36.01 0.26 1.16 16 5 O -0.51 -2.49 15.73 -18.74 -0.29 -2.78 16 6 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 9 C -0.11 0.29 5.08 -26.73 -0.14 0.16 16 10 C -0.10 0.28 2.23 -90.62 -0.20 0.08 16 11 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 12 C 0.12 -0.12 5.06 -4.04 -0.02 -0.15 16 13 N -0.72 0.18 5.28 -61.39 -0.32 -0.15 16 14 C 0.59 1.54 7.81 -12.54 -0.10 1.45 16 15 O -0.54 -2.92 14.85 5.26 0.08 -2.84 16 16 C -0.25 -0.47 6.31 -103.27 -0.65 -1.12 16 17 C 0.09 0.15 7.37 -34.97 -0.26 -0.11 16 18 C -0.09 0.02 9.89 36.00 0.36 0.37 16 19 O -0.17 -0.19 8.89 7.67 0.07 -0.12 16 20 C -0.06 -0.02 6.20 -35.73 -0.22 -0.24 16 21 C -0.03 0.03 2.97 36.01 0.11 0.14 16 22 O -0.53 0.57 12.86 -35.23 -0.45 0.12 16 23 Si 0.70 -0.91 32.09 -169.99 -5.45 -6.36 16 24 C -0.15 -0.05 10.46 -37.45 -0.39 -0.45 16 25 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 26 C -0.11 0.23 5.14 -26.73 -0.14 0.10 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 30 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.07 -0.02 8.10 -51.93 -0.42 -0.44 16 33 H 0.07 -0.02 8.10 -51.93 -0.42 -0.44 16 34 H 0.07 -0.19 7.18 -51.93 -0.37 -0.56 16 35 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 36 H 0.07 -0.01 8.14 -51.92 -0.42 -0.43 16 37 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.40 -0.85 6.83 -40.82 -0.28 -1.13 16 39 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 41 H 0.11 0.12 6.49 -51.93 -0.34 -0.21 16 42 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 43 H 0.38 -1.81 8.70 45.56 0.40 -1.42 16 44 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 45 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 46 H 0.16 -0.24 7.74 -52.49 -0.41 -0.64 16 47 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 48 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 49 H 0.08 -0.17 8.11 -51.93 -0.42 -0.59 16 50 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 409.94 15.07 6.18 6.18 Total: 0.00 -8.72 409.94 -10.09 -18.81 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -8.21 Total: -14.19 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: -1.28 Total: 2.29 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.32 Total: -0.15 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -1.00 Total: -6.58 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.45 Total: -6.36 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.72 -10.09 -18.81 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13308374.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.331 kcal (2) G-P(sol) polarization free energy of solvation -8.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds