Wall clock time and date at job start Sun Mar 7 2021 07:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45198 * 109.47372 * 2 1 4 4 C 1.34230 * 117.00173 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00010 * 359.97438 * 4 3 2 6 6 C 1.50706 * 119.99763 * 180.02562 * 4 3 2 7 7 H 1.09000 * 109.47161 * 60.00117 * 6 4 3 8 8 C 1.53002 * 109.46925 * 180.02562 * 6 4 3 9 9 C 1.52996 * 109.47340 * 180.02562 * 8 6 4 10 10 C 1.53005 * 109.46543 * 299.99607 * 9 8 6 11 11 H 1.09000 * 109.47360 * 299.99881 * 10 9 8 12 12 C 1.53006 * 109.47055 * 179.97438 * 10 9 8 13 13 N 1.46496 * 109.47070 * 175.00071 * 12 10 9 14 14 C 1.34775 * 119.99828 * 179.97438 * 13 12 10 15 15 O 1.21593 * 120.00094 * 0.02562 * 14 13 12 16 16 C 1.47532 * 120.00056 * 179.97438 * 14 13 12 17 17 C 1.40144 * 120.19202 * 179.72327 * 16 14 13 18 18 O 1.35650 * 120.14771 * 0.02562 * 17 16 14 19 19 C 1.38710 * 119.69979 * 179.79345 * 17 16 14 20 20 C 1.38054 * 120.08209 * 0.49219 * 19 17 16 21 21 C 1.50704 * 119.80619 * 179.76441 * 20 19 17 22 22 O 1.42899 * 109.46847 * 64.97134 * 21 20 19 23 23 Si 1.86295 * 109.47279 * 184.97528 * 21 20 19 24 24 C 1.38549 * 120.39046 * 359.73737 * 20 19 17 25 25 C 1.37781 * 120.30211 * 0.02736 * 24 20 19 26 26 C 1.53002 * 109.46982 * 60.00174 * 10 9 8 27 27 C 1.52996 * 109.47343 * 299.99735 * 26 10 9 28 28 H 1.08998 * 109.47020 * 300.00157 * 1 2 3 29 29 H 1.08997 * 109.46822 * 59.99725 * 1 2 3 30 30 H 1.08999 * 109.47195 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47442 * 239.99650 * 2 1 3 32 32 H 1.09003 * 109.46945 * 119.99550 * 2 1 3 33 33 H 1.09004 * 109.46930 * 299.99901 * 8 6 4 34 34 H 1.09004 * 109.47059 * 59.99503 * 8 6 4 35 35 H 1.09000 * 109.47196 * 59.99588 * 9 8 6 36 36 H 1.09001 * 109.47364 * 180.02562 * 9 8 6 37 37 H 1.09000 * 109.46904 * 295.00649 * 12 10 9 38 38 H 1.09004 * 109.46568 * 54.99961 * 12 10 9 39 39 H 0.96994 * 120.00061 * 0.02562 * 13 12 10 40 40 H 0.96702 * 113.99761 * 89.99992 * 18 17 16 41 41 H 1.07997 * 119.95994 * 180.25395 * 19 17 16 42 42 H 1.08996 * 109.46565 * 304.97563 * 21 20 19 43 43 H 0.96703 * 114.00217 * 60.00643 * 22 21 20 44 44 H 1.48498 * 109.99802 * 180.02562 * 23 21 20 45 45 H 1.48509 * 110.00029 * 301.31716 * 23 21 20 46 46 H 1.08005 * 119.84911 * 180.02562 * 24 20 19 47 47 H 1.08007 * 120.04543 * 180.02562 * 25 24 20 48 48 H 1.09004 * 109.47059 * 60.00133 * 26 10 9 49 49 H 1.09004 * 109.46930 * 179.97438 * 26 10 9 50 50 H 1.09000 * 109.46870 * 300.00214 * 27 26 10 51 51 H 1.08992 * 109.47554 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0015 6 6 3.9208 2.9374 0.0012 7 1 3.5845 3.4693 0.8912 8 6 5.4487 2.8573 0.0010 9 6 6.0335 4.2711 0.0023 10 6 5.5620 5.0191 -1.2464 11 1 5.8979 4.4877 -2.1368 12 6 6.1463 6.4332 -1.2449 13 7 5.7935 7.1086 -2.4961 14 6 6.2030 8.3734 -2.7178 15 8 6.8655 8.9537 -1.8794 16 6 5.8483 9.0534 -3.9780 17 6 6.2670 10.3705 -4.2102 18 8 7.0012 11.0265 -3.2771 19 6 5.9314 10.9986 -5.4006 20 6 5.1796 10.3315 -6.3469 21 6 4.8140 11.0218 -7.6358 22 8 6.0000 11.2856 -8.3878 23 14 3.6806 9.9253 -8.6277 24 6 4.7596 9.0310 -6.1191 25 6 5.0880 8.3902 -4.9444 26 6 4.0340 5.0992 -1.2463 27 6 3.4492 3.6854 -1.2474 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 1.8934 -0.5139 -0.8900 32 1 1.8933 -0.5138 0.8901 33 1 5.7847 2.3248 0.8908 34 1 5.7846 2.3255 -0.8892 35 1 5.6976 4.8025 0.8927 36 1 7.1221 4.2141 0.0018 37 1 5.7401 6.9932 -0.4026 38 1 7.2312 6.3778 -1.1551 39 1 5.2647 6.6458 -3.1647 40 1 7.9564 10.9151 -3.3786 41 1 6.2553 12.0121 -5.5856 42 1 4.3080 11.9613 -7.4138 43 1 6.5023 10.4929 -8.6213 44 1 3.3133 10.5944 -9.9014 45 1 4.3471 8.6284 -8.9096 46 1 4.1721 8.5172 -6.8657 47 1 4.7588 7.3762 -4.7713 48 1 3.6981 5.6306 -0.3558 49 1 3.6981 5.6324 -2.1356 50 1 3.7851 3.1540 -2.1379 51 1 2.3608 3.7424 -1.2478 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13422076.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:41 Heat of formation + Delta-G solvation = -184.258379 kcal Electronic energy + Delta-G solvation = -32474.300022 eV Core-core repulsion = 27918.769594 eV Total energy + Delta-G solvation = -4555.530428 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -41.80620 -41.58401 -40.23897 -39.37064 -38.45505 -37.59187 -37.24076 -35.83429 -33.51555 -32.79515 -32.07141 -31.85831 -31.13864 -28.25759 -26.94882 -24.76024 -24.03764 -23.90094 -23.57182 -22.94664 -21.67400 -21.53368 -20.85139 -19.51090 -18.73042 -18.65388 -18.31629 -17.60675 -17.55277 -17.35469 -16.70957 -16.52123 -16.32498 -16.16670 -15.90008 -15.82956 -15.40424 -15.19413 -15.13249 -14.99446 -14.84853 -14.61837 -14.33249 -13.94518 -13.82591 -13.76249 -13.59941 -13.42020 -13.25942 -13.07795 -13.00565 -12.88420 -12.61975 -12.42810 -12.35547 -12.26486 -12.11261 -11.93091 -11.64952 -11.62922 -11.50915 -11.29415 -11.18545 -10.87720 -10.65530 -10.22047 -10.04772 -9.81580 -5.07396 -0.43077 0.07580 1.13402 1.21485 1.46901 1.64625 1.75883 1.85901 2.06960 2.57009 3.05661 3.27066 3.33544 3.39300 3.42855 3.48881 3.59263 3.68099 3.78715 3.83379 3.92231 3.94061 3.97642 4.01768 4.14668 4.18189 4.20928 4.26397 4.28344 4.32455 4.32902 4.53874 4.54953 4.59367 4.65569 4.67595 4.70789 4.77707 4.82883 4.88631 4.93024 4.93937 4.98875 4.99896 5.04720 5.10082 5.14347 5.16821 5.26632 5.38788 5.48554 5.50131 6.25806 6.42701 6.69228 6.76719 7.21482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.111 0.889 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.103 4.103 11 H 0.081 0.919 12 C 0.124 3.876 13 N -0.728 5.728 14 C 0.557 3.443 15 O -0.518 6.518 16 C -0.164 4.164 17 C 0.173 3.827 18 O -0.476 6.476 19 C -0.129 4.129 20 C -0.074 4.074 21 C -0.081 4.081 22 O -0.526 6.526 23 Si 0.691 3.309 24 C -0.137 4.137 25 C -0.065 4.065 26 C -0.114 4.114 27 C -0.110 4.110 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.081 0.919 31 H 0.070 0.930 32 H 0.070 0.930 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.071 0.929 36 H 0.075 0.925 37 H 0.072 0.928 38 H 0.071 0.929 39 H 0.398 0.602 40 H 0.398 0.602 41 H 0.140 0.860 42 H 0.123 0.877 43 H 0.377 0.623 44 H -0.255 1.255 45 H -0.258 1.258 46 H 0.136 0.864 47 H 0.133 0.867 48 H 0.072 0.928 49 H 0.069 0.931 50 H 0.069 0.931 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.235 -2.710 -2.001 5.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.122 4.122 11 H 0.099 0.901 12 C 0.001 3.999 13 N -0.382 5.382 14 C 0.344 3.656 15 O -0.394 6.394 16 C -0.167 4.167 17 C 0.126 3.874 18 O -0.287 6.287 19 C -0.147 4.147 20 C -0.075 4.075 21 C -0.191 4.191 22 O -0.333 6.333 23 Si 0.592 3.408 24 C -0.155 4.155 25 C -0.084 4.084 26 C -0.152 4.152 27 C -0.148 4.148 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.100 0.900 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.094 0.906 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.094 0.906 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.234 0.766 40 H 0.257 0.743 41 H 0.158 0.842 42 H 0.141 0.859 43 H 0.225 0.775 44 H -0.180 1.180 45 H -0.183 1.183 46 H 0.153 0.847 47 H 0.151 0.849 48 H 0.091 0.909 49 H 0.088 0.912 50 H 0.088 0.912 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -4.405 -2.264 -1.830 5.280 hybrid contribution 1.341 -0.774 -0.618 1.667 sum -3.063 -3.038 -2.448 4.960 Atomic orbital electron populations 1.21818 0.92336 1.03252 1.03641 1.23072 0.95588 0.79937 1.02697 1.86506 1.24492 1.32662 1.83800 1.23810 0.80640 0.92716 0.72173 1.90686 1.60472 1.43200 1.45011 1.21156 0.96865 0.89623 1.02218 0.87156 1.21441 0.91417 0.97172 1.04060 1.21512 1.01137 0.94787 0.97431 1.21492 0.95839 0.94853 1.00003 0.90104 1.21435 1.00443 0.91815 0.86200 1.45922 1.56576 1.14494 1.21167 1.18030 0.79952 0.81273 0.86304 1.90845 1.37945 1.64897 1.45679 1.20441 1.05067 0.94956 0.96265 1.18513 0.93281 0.88217 0.87373 1.84760 1.22194 1.71213 1.50575 1.21358 1.00103 1.01493 0.91759 1.20375 0.96581 0.94128 0.96435 1.25160 0.93591 1.07954 0.92376 1.86638 1.36933 1.36049 1.73638 0.94873 0.86409 0.77398 0.82132 1.20994 1.01675 0.94630 0.98184 1.21132 0.95459 0.99407 0.92423 1.21629 0.94290 0.96163 1.03083 1.21527 1.01597 0.95635 0.96044 0.91367 0.91375 0.90036 0.91168 0.91155 0.90577 0.90758 0.90993 0.90639 0.90973 0.91075 0.76598 0.74343 0.84196 0.85926 0.77540 1.18013 1.18299 0.84661 0.84919 0.90895 0.91245 0.91223 0.90161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.41 10.12 -39.26 -0.40 -0.80 16 4 C 0.46 0.70 7.26 36.01 0.26 0.96 16 5 O -0.51 -2.30 15.73 -18.75 -0.29 -2.60 16 6 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 7 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.15 4.49 -26.73 -0.12 0.03 16 9 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 10 C -0.10 0.35 2.23 -90.61 -0.20 0.14 16 11 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 12 C 0.12 -0.18 5.06 -4.04 -0.02 -0.20 16 13 N -0.73 0.95 5.23 -61.35 -0.32 0.63 16 14 C 0.56 1.13 7.76 -12.47 -0.10 1.03 16 15 O -0.52 -3.04 15.16 -16.60 -0.25 -3.30 16 16 C -0.16 -0.12 5.89 -104.84 -0.62 -0.73 16 17 C 0.17 0.27 6.72 -38.69 -0.26 0.01 16 18 O -0.48 -1.25 11.58 -40.53 -0.47 -1.72 16 19 C -0.13 -0.04 9.60 -39.47 -0.38 -0.42 16 20 C -0.07 0.08 5.36 -104.57 -0.56 -0.48 16 21 C -0.08 0.12 2.79 36.01 0.10 0.22 16 22 O -0.53 -0.02 12.83 -35.23 -0.45 -0.47 16 23 Si 0.69 -1.67 29.86 -169.99 -5.08 -6.75 16 24 C -0.14 0.31 8.64 -39.63 -0.34 -0.04 16 25 C -0.07 0.13 9.53 -39.20 -0.37 -0.24 16 26 C -0.11 0.43 5.08 -26.73 -0.14 0.29 16 27 C -0.11 0.32 5.14 -26.73 -0.14 0.18 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 31 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 32 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 33 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 34 H 0.07 -0.04 8.10 -51.93 -0.42 -0.46 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 39 H 0.40 -1.58 5.68 -40.82 -0.23 -1.81 16 40 H 0.40 -0.39 9.06 45.56 0.41 0.02 16 41 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 42 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 43 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 44 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 45 H -0.26 0.23 7.00 56.52 0.40 0.63 16 46 H 0.14 -0.56 4.81 -52.48 -0.25 -0.82 16 47 H 0.13 -0.67 6.41 -52.48 -0.34 -1.01 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 49 H 0.07 -0.31 7.18 -51.93 -0.37 -0.68 16 50 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 51 H 0.08 -0.23 8.11 -51.93 -0.42 -0.65 16 LS Contribution 412.49 15.07 6.22 6.22 Total: 0.00 -10.59 412.49 -10.88 -21.46 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -7.18 Total: -14.42 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: -2.65 Total: 1.74 kcal Atomic # 7 Polarization: 0.95 SS G_CDS: -0.32 Total: 0.63 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -1.87 Total: -8.89 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.08 Total: -6.75 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -10.59 -10.88 -21.46 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13422076.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.794 kcal (2) G-P(sol) polarization free energy of solvation -10.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -184.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds