Wall clock time and date at job start Sun Mar 7 2021 07:15:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45198 * 109.47272 * 2 1 4 4 C 1.34234 * 116.99943 * 180.02562 * 3 2 1 5 5 O 1.20828 * 120.00115 * 359.97438 * 4 3 2 6 6 C 1.50697 * 119.99749 * 180.02562 * 4 3 2 7 7 H 1.08996 * 109.47730 * 60.00079 * 6 4 3 8 8 C 1.53002 * 109.47106 * 179.97438 * 6 4 3 9 9 C 1.52997 * 109.47415 * 179.97438 * 8 6 4 10 10 C 1.53006 * 109.47164 * 300.00027 * 9 8 6 11 11 H 1.09000 * 109.47050 * 300.00004 * 10 9 8 12 12 C 1.52997 * 109.47164 * 179.97438 * 10 9 8 13 13 N 1.46495 * 109.46909 * 175.00315 * 12 10 9 14 14 C 1.34780 * 119.99828 * 180.02562 * 13 12 10 15 15 O 1.21652 * 119.99929 * 359.97438 * 14 13 12 16 16 C 1.47048 * 119.99735 * 179.97438 * 14 13 12 17 17 C 1.36221 * 123.48882 * 180.02562 * 16 14 13 18 18 Cl 1.73601 * 124.60956 * 0.02562 * 17 16 14 19 19 S 1.70447 * 110.78989 * 180.02562 * 17 16 14 20 20 C 1.75493 * 92.46462 * 0.02562 * 19 17 16 21 21 C 1.50701 * 124.68616 * 180.02562 * 20 19 17 22 22 O 1.42899 * 109.47349 * 119.96972 * 21 20 19 23 23 Si 1.86302 * 109.47165 * 359.97267 * 21 20 19 24 24 C 1.32693 * 110.63013 * 359.70779 * 20 19 17 25 25 C 1.52999 * 109.46626 * 59.99702 * 10 9 8 26 26 C 1.52996 * 109.47240 * 299.99620 * 6 4 3 27 27 H 1.08996 * 109.47086 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46933 * 299.99854 * 1 2 3 29 29 H 1.09002 * 109.46793 * 59.99565 * 1 2 3 30 30 H 1.09004 * 109.47369 * 240.00292 * 2 1 3 31 31 H 1.09002 * 109.47319 * 120.00453 * 2 1 3 32 32 H 1.09000 * 109.46986 * 59.99785 * 8 6 4 33 33 H 1.09001 * 109.47601 * 300.00508 * 8 6 4 34 34 H 1.09001 * 109.46922 * 180.02562 * 9 8 6 35 35 H 1.09000 * 109.47140 * 59.99976 * 9 8 6 36 36 H 1.09001 * 109.47096 * 295.00066 * 12 10 9 37 37 H 1.08994 * 109.47065 * 55.00225 * 12 10 9 38 38 H 0.97000 * 120.00271 * 359.97438 * 13 12 10 39 39 H 1.08997 * 109.47395 * 239.97195 * 21 20 19 40 40 H 0.96698 * 114.00556 * 300.00472 * 22 21 20 41 41 H 1.48496 * 110.00219 * 58.67854 * 23 21 20 42 42 H 1.48498 * 110.00310 * 180.02562 * 23 21 20 43 43 H 1.07996 * 123.45623 * 180.26790 * 24 20 19 44 44 H 1.09000 * 109.47160 * 60.00369 * 25 10 9 45 45 H 1.09002 * 109.46719 * 180.02562 * 25 10 9 46 46 H 1.09000 * 109.47054 * 300.00339 * 26 6 4 47 47 H 1.09001 * 109.46997 * 60.00072 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.5853 3.4690 0.8904 8 6 5.4487 2.8572 -0.0001 9 6 6.0335 4.2710 -0.0002 10 6 5.5619 5.0180 -1.2495 11 1 5.8977 4.4858 -2.1395 12 6 6.1462 6.4320 -1.2492 13 7 5.7933 7.1063 -2.5010 14 6 6.2037 8.3706 -2.7242 15 8 6.8667 8.9518 -1.8860 16 6 5.8499 9.0473 -3.9809 17 6 6.2267 10.3217 -4.2802 18 17 7.1735 11.3399 -3.2408 19 16 5.6421 10.7809 -5.8141 20 6 4.8686 9.2263 -6.0686 21 6 4.0892 8.8478 -7.3016 22 8 4.7000 7.7147 -7.9221 23 14 4.0802 10.2790 -8.4942 24 6 5.0705 8.4277 -5.0282 25 6 4.0340 5.0980 -1.2493 26 6 3.4487 3.6850 -1.2486 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 1.8933 -0.5139 0.8899 32 1 5.7845 2.3254 -0.8903 33 1 5.7848 2.3246 0.8896 34 1 7.1220 4.2139 -0.0008 35 1 5.6977 4.8032 0.8898 36 1 5.7401 6.9928 -0.4074 37 1 7.2310 6.3768 -1.1596 38 1 5.2650 6.6428 -3.1694 39 1 3.0649 8.6010 -7.0225 40 1 5.6152 7.8625 -8.1972 41 1 5.4724 10.6459 -8.8579 42 1 3.3142 9.9188 -9.7143 43 1 4.6887 7.4193 -4.9688 44 1 3.6981 5.6302 -0.3593 45 1 3.6979 5.6298 -2.1395 46 1 3.7842 3.1533 -2.1390 47 1 2.3602 3.7420 -1.2481 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_13431040.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:15:57 Heat of formation + Delta-G solvation = -139.965179 kcal Electronic energy + Delta-G solvation = -30939.561470 eV Core-core repulsion = 26433.986386 eV Total energy + Delta-G solvation = -4505.575085 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.099 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.83420 -41.09801 -39.60374 -38.88768 -37.99453 -37.71612 -37.00531 -35.91280 -33.12254 -32.27589 -31.74623 -31.58705 -28.11291 -26.84110 -25.59398 -24.29935 -23.74833 -23.08467 -22.16201 -21.58497 -20.94926 -20.48537 -19.39470 -18.73065 -18.04948 -17.89747 -17.66945 -17.53178 -16.81820 -16.62919 -16.29999 -15.85507 -15.76998 -15.65292 -15.29758 -15.02445 -14.84756 -14.70320 -14.66017 -14.40859 -14.31154 -13.93472 -13.82884 -13.65564 -13.47874 -13.23742 -12.99984 -12.93030 -12.87527 -12.57913 -12.56179 -12.47681 -12.24892 -12.11108 -12.08888 -11.85391 -11.79757 -11.58055 -11.44086 -11.20604 -11.10595 -10.96066 -10.72403 -10.18355 -9.85499 -9.62775 -5.04452 -0.60896 -0.16886 0.50289 0.74208 1.06768 1.10631 1.20365 1.54451 1.64515 1.90808 2.20226 2.20767 3.25855 3.43035 3.49456 3.59727 3.67268 3.83659 3.88022 3.92746 3.95390 3.99228 4.03607 4.15858 4.27889 4.31806 4.39614 4.42373 4.47185 4.51701 4.55954 4.67632 4.75685 4.80151 4.82982 4.85647 4.88542 4.97864 4.99633 5.09815 5.11689 5.13152 5.18598 5.23135 5.32646 5.38949 5.44686 5.52424 6.42317 6.47589 6.66575 7.16733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.125 0.875 8 C -0.099 4.099 9 C -0.107 4.107 10 C -0.092 4.092 11 H 0.086 0.914 12 C 0.128 3.872 13 N -0.707 5.707 14 C 0.568 3.432 15 O -0.562 6.562 16 C -0.166 4.166 17 C -0.140 4.140 18 Cl 0.002 6.998 19 S 0.262 5.738 20 C -0.225 4.225 21 C -0.026 4.026 22 O -0.534 6.534 23 Si 0.703 3.297 24 C -0.068 4.068 25 C -0.109 4.109 26 C -0.104 4.104 27 H 0.094 0.906 28 H 0.068 0.932 29 H 0.070 0.930 30 H 0.066 0.934 31 H 0.065 0.935 32 H 0.063 0.937 33 H 0.063 0.937 34 H 0.074 0.926 35 H 0.077 0.923 36 H 0.065 0.935 37 H 0.059 0.941 38 H 0.413 0.587 39 H 0.151 0.849 40 H 0.390 0.610 41 H -0.260 1.260 42 H -0.269 1.269 43 H 0.181 0.819 44 H 0.075 0.925 45 H 0.082 0.918 46 H 0.067 0.933 47 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.215 0.574 -3.312 7.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.276 6.276 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.143 0.857 8 C -0.137 4.137 9 C -0.144 4.144 10 C -0.111 4.111 11 H 0.104 0.896 12 C 0.005 3.995 13 N -0.360 5.360 14 C 0.354 3.646 15 O -0.442 6.442 16 C -0.186 4.186 17 C -0.287 4.287 18 Cl 0.031 6.969 19 S 0.527 5.473 20 C -0.342 4.342 21 C -0.139 4.139 22 O -0.343 6.343 23 Si 0.605 3.395 24 C -0.096 4.096 25 C -0.147 4.147 26 C -0.142 4.142 27 H 0.113 0.887 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.085 0.915 31 H 0.083 0.917 32 H 0.082 0.918 33 H 0.082 0.918 34 H 0.093 0.907 35 H 0.096 0.904 36 H 0.084 0.916 37 H 0.078 0.922 38 H 0.251 0.749 39 H 0.169 0.831 40 H 0.239 0.761 41 H -0.186 1.186 42 H -0.195 1.195 43 H 0.198 0.802 44 H 0.093 0.907 45 H 0.101 0.899 46 H 0.086 0.914 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -5.719 2.092 -4.152 7.370 hybrid contribution 1.043 -2.447 0.796 2.777 sum -4.675 -0.356 -3.356 5.766 Atomic orbital electron populations 1.21818 0.90631 1.04215 1.03796 1.23228 0.96956 0.79523 1.02300 1.86519 1.24353 1.33268 1.83486 1.24443 0.80489 0.93464 0.70895 1.90668 1.61175 1.44595 1.46876 1.21266 0.96541 0.88097 1.03648 0.85695 1.21378 0.91630 0.97719 1.02963 1.21474 1.01066 0.93936 0.97970 1.21387 0.96199 0.93523 0.99969 0.89567 1.21404 0.99862 0.92560 0.85719 1.45732 1.55486 1.13376 1.21426 1.17683 0.79368 0.82039 0.85510 1.90862 1.40073 1.66185 1.47051 1.20353 1.06320 0.93880 0.98006 1.25816 1.04342 0.97109 1.01435 1.98426 1.68797 1.64912 1.64802 1.83291 1.45050 1.13519 1.05433 1.24873 1.08472 0.98064 1.02841 1.24469 0.99045 0.97178 0.93207 1.86621 1.32912 1.35839 1.78916 0.94562 0.82149 0.81304 0.81510 1.21121 0.97142 1.01555 0.89825 1.21597 0.93556 0.95639 1.03868 1.21488 1.01798 0.95834 0.95064 0.88693 0.91257 0.91086 0.91534 0.91687 0.91843 0.91788 0.90719 0.90401 0.91637 0.92246 0.74894 0.83122 0.76055 1.18581 1.19451 0.80227 0.90675 0.89896 0.91433 0.89778 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.58 10.29 71.98 0.74 1.32 16 2 C 0.05 0.05 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.09 10.12 -51.45 -0.52 -1.61 16 4 C 0.46 1.92 7.26 71.23 0.52 2.43 16 5 O -0.54 -5.97 15.73 21.96 0.35 -5.63 16 6 C -0.08 0.21 2.63 -11.54 -0.03 0.17 16 7 H 0.13 -0.69 8.14 -2.39 -0.02 -0.71 16 8 C -0.10 0.20 4.49 30.59 0.14 0.33 16 9 C -0.11 0.57 5.20 30.60 0.16 0.73 16 10 C -0.09 0.62 2.23 -10.79 -0.02 0.60 16 11 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 12 C 0.13 -0.33 5.06 86.38 0.44 0.11 16 13 N -0.71 1.71 5.26 -466.74 -2.46 -0.74 16 14 C 0.57 2.80 7.79 86.55 0.67 3.47 16 15 O -0.56 -7.39 14.91 -4.19 -0.06 -7.46 16 16 C -0.17 -0.29 5.98 -19.84 -0.12 -0.41 16 17 C -0.14 -0.47 6.87 67.35 0.46 0.00 16 18 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.06 16 19 S 0.26 -0.76 20.17 -56.49 -1.14 -1.90 16 20 C -0.22 1.24 5.68 24.52 0.14 1.37 16 21 C -0.03 0.20 2.95 71.24 0.21 0.41 16 22 O -0.53 2.56 12.84 -148.98 -1.91 0.65 16 23 Si 0.70 -4.28 30.91 68.60 2.12 -2.16 16 24 C -0.07 0.32 9.71 22.70 0.22 0.54 16 25 C -0.11 0.91 5.07 30.58 0.16 1.07 16 26 C -0.10 0.64 5.13 30.58 0.16 0.79 16 27 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 28 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 30 H 0.07 0.10 8.13 -2.39 -0.02 0.08 16 31 H 0.06 0.12 8.13 -2.39 -0.02 0.10 16 32 H 0.06 0.02 8.10 -2.39 -0.02 0.00 16 33 H 0.06 0.04 8.10 -2.39 -0.02 0.02 16 34 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 36 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 38 H 0.41 -3.43 6.20 -92.71 -0.57 -4.01 16 39 H 0.15 -1.61 7.96 -2.39 -0.02 -1.63 16 40 H 0.39 -3.72 8.70 -74.06 -0.64 -4.36 16 41 H -0.26 0.55 7.11 99.48 0.71 1.26 16 42 H -0.27 -0.17 7.11 99.48 0.71 0.54 16 43 H 0.18 -1.80 7.10 -2.91 -0.02 -1.82 16 44 H 0.07 -0.60 8.14 -2.39 -0.02 -0.62 16 45 H 0.08 -0.87 7.18 -2.39 -0.02 -0.88 16 46 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 47 H 0.08 -0.53 8.11 -2.39 -0.02 -0.55 16 Total: 0.00 -21.68 411.17 0.41 -21.27 By element: Atomic # 1 Polarization: -15.61 SS G_CDS: -0.17 Total: -15.78 kcal Atomic # 6 Polarization: 9.14 SS G_CDS: 4.28 Total: 13.42 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -2.46 Total: -0.74 kcal Atomic # 8 Polarization: -11.89 SS G_CDS: -2.15 Total: -14.04 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.12 Total: -2.16 kcal Atomic # 16 Polarization: -0.76 SS G_CDS: -1.14 Total: -1.90 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.06 kcal Total: -21.68 0.41 -21.27 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13431040.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.697 kcal (2) G-P(sol) polarization free energy of solvation -21.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.268 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.965 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds