Wall clock time and date at job start Sun Mar 7 2021 07:16:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45192 * 109.47424 * 2 1 4 4 C 1.34231 * 117.00457 * 180.02562 * 3 2 1 5 5 O 1.20834 * 119.99569 * 0.02562 * 4 3 2 6 6 C 1.50694 * 120.00613 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.46857 * 60.00003 * 6 4 3 8 8 C 1.52996 * 109.47373 * 180.02562 * 6 4 3 9 9 C 1.53008 * 109.47175 * 180.02562 * 8 6 4 10 10 C 1.52998 * 109.46875 * 300.00038 * 9 8 6 11 11 H 1.09000 * 109.47187 * 299.99816 * 10 9 8 12 12 C 1.52998 * 109.46896 * 179.97438 * 10 9 8 13 13 N 1.46506 * 109.47153 * 174.99532 * 12 10 9 14 14 C 1.34778 * 120.00085 * 179.97438 * 13 12 10 15 15 O 1.21616 * 119.99747 * 0.02562 * 14 13 12 16 16 C 1.47370 * 120.00027 * 180.02562 * 14 13 12 17 17 C 1.36423 * 127.19295 * 359.97438 * 16 14 13 18 18 O 1.33652 * 108.39919 * 180.30306 * 17 16 14 19 19 C 1.34218 * 110.90465 * 359.55326 * 18 17 16 20 20 C 1.50702 * 125.43673 * 180.21087 * 19 18 17 21 21 O 1.42905 * 109.46945 * 245.28011 * 20 19 18 22 22 Si 1.86298 * 109.47092 * 5.27945 * 20 19 18 23 23 C 1.34179 * 109.12922 * 0.44945 * 19 18 17 24 24 C 1.52996 * 109.47250 * 60.00008 * 10 9 8 25 25 C 1.52998 * 109.47164 * 299.99827 * 24 10 9 26 26 H 1.08997 * 109.47244 * 60.00208 * 1 2 3 27 27 H 1.09000 * 109.47245 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.46847 * 299.99901 * 1 2 3 29 29 H 1.09005 * 109.47177 * 239.99262 * 2 1 3 30 30 H 1.09000 * 109.46969 * 120.00245 * 2 1 3 31 31 H 1.08994 * 109.47487 * 59.99788 * 8 6 4 32 32 H 1.08999 * 109.47031 * 299.99969 * 8 6 4 33 33 H 1.08995 * 109.47195 * 179.97438 * 9 8 6 34 34 H 1.09000 * 109.47063 * 59.99930 * 9 8 6 35 35 H 1.08998 * 109.47279 * 54.99705 * 12 10 9 36 36 H 1.09001 * 109.47260 * 294.99930 * 12 10 9 37 37 H 0.97002 * 119.99620 * 0.02562 * 13 12 10 38 38 H 1.08002 * 125.79741 * 0.03369 * 17 16 14 39 39 H 1.09002 * 109.47519 * 125.28034 * 20 19 18 40 40 H 0.96700 * 113.99842 * 59.99656 * 21 20 19 41 41 H 1.48497 * 110.00245 * 58.68201 * 22 20 19 42 42 H 1.48501 * 110.00148 * 180.02562 * 22 20 19 43 43 H 1.07994 * 127.02801 * 179.71242 * 23 19 18 44 44 H 1.08994 * 109.47487 * 60.00151 * 24 10 9 45 45 H 1.09009 * 109.47060 * 180.02562 * 24 10 9 46 46 H 1.09000 * 109.47052 * 300.00057 * 25 24 10 47 47 H 1.08995 * 109.47184 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0015 6 6 3.9208 2.9372 -0.0012 7 1 3.5852 3.4696 0.8888 8 6 5.4487 2.8571 -0.0023 9 6 6.0336 4.2710 -0.0023 10 6 5.5611 5.0183 -1.2510 11 1 5.8964 4.4864 -2.1414 12 6 6.1454 6.4323 -1.2506 13 7 5.7919 7.1071 -2.5020 14 6 6.2012 8.3718 -2.7247 15 8 6.8645 8.9526 -1.8869 16 6 5.8451 9.0508 -3.9832 17 6 5.1134 8.5422 -5.0162 18 8 5.0242 9.4749 -5.9693 19 6 5.6648 10.5961 -5.6036 20 6 5.7665 11.8531 -6.4288 21 8 7.1301 12.0735 -6.7950 22 14 4.7319 11.6713 -7.9674 23 6 6.2048 10.4176 -4.3883 24 6 4.0332 5.0984 -1.2498 25 6 3.4484 3.6847 -1.2498 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5140 -0.8900 30 1 1.8933 -0.5139 0.8900 31 1 5.7840 2.3249 -0.8924 32 1 5.7853 2.3251 0.8875 33 1 7.1220 4.2139 -0.0027 34 1 5.6983 4.8029 0.8881 35 1 7.2304 6.3771 -1.1616 36 1 5.7399 6.9929 -0.4083 37 1 5.2625 6.6439 -3.1700 38 1 4.6834 7.5523 -5.0586 39 1 5.4053 12.7005 -5.8461 40 1 7.5179 11.3575 -7.3166 41 1 3.3170 11.4099 -7.6001 42 1 4.8241 12.9041 -8.7901 43 1 6.7853 11.1317 -3.8233 44 1 3.6979 5.6303 -0.3595 45 1 3.6966 5.6305 -2.1397 46 1 3.7836 3.1528 -2.1402 47 1 2.3599 3.7417 -1.2494 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13456056.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:02 Heat of formation + Delta-G solvation = -154.748964 kcal Electronic energy + Delta-G solvation = -28761.744645 eV Core-core repulsion = 24491.257601 eV Total energy + Delta-G solvation = -4270.487044 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.73929 -41.77192 -40.64145 -39.44557 -38.05733 -37.61116 -35.90825 -34.05954 -33.16171 -32.43313 -31.95463 -31.60693 -27.96004 -26.63556 -25.18805 -24.20114 -23.92856 -23.07563 -22.28800 -21.68462 -21.13524 -20.63717 -19.40229 -18.66529 -17.90966 -17.62453 -17.60846 -17.51410 -17.26823 -16.86780 -16.47296 -16.12044 -15.89300 -15.69214 -15.36248 -15.06483 -15.00094 -14.66355 -14.56951 -14.21079 -14.00160 -13.95018 -13.83417 -13.68933 -13.52289 -13.43366 -13.11566 -12.90347 -12.88943 -12.62990 -12.37409 -12.28284 -12.16687 -11.94340 -11.65779 -11.51901 -11.32046 -11.20330 -11.03112 -10.88669 -10.67332 -10.15342 -9.83215 -5.09449 0.21060 0.88586 1.09219 1.20412 1.43867 1.63650 1.73863 1.88370 2.05660 2.35451 3.17927 3.32117 3.37221 3.40963 3.47375 3.56743 3.75306 3.81877 3.87782 3.92007 3.96147 3.99464 4.12534 4.19213 4.22889 4.25461 4.27036 4.31144 4.35610 4.52819 4.56176 4.58164 4.65657 4.69587 4.76836 4.77347 4.82163 4.86733 4.92358 4.97960 4.99059 5.03792 5.12842 5.19786 5.25103 5.36066 5.47643 5.80776 6.35651 6.40691 6.75730 7.19428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.103 4.103 11 H 0.081 0.919 12 C 0.124 3.876 13 N -0.728 5.728 14 C 0.587 3.413 15 O -0.531 6.531 16 C -0.237 4.237 17 C 0.031 3.969 18 O -0.165 6.165 19 C -0.058 4.058 20 C -0.029 4.029 21 O -0.530 6.530 22 Si 0.707 3.293 23 C -0.123 4.123 24 C -0.114 4.114 25 C -0.111 4.111 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.397 0.603 38 H 0.213 0.787 39 H 0.134 0.866 40 H 0.384 0.616 41 H -0.254 1.254 42 H -0.247 1.247 43 H 0.162 0.838 44 H 0.072 0.928 45 H 0.068 0.932 46 H 0.069 0.931 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.681 -3.177 -3.436 5.954 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.393 6.393 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.122 4.122 11 H 0.100 0.900 12 C 0.001 3.999 13 N -0.380 5.380 14 C 0.374 3.626 15 O -0.408 6.408 16 C -0.241 4.241 17 C -0.040 4.040 18 O -0.061 6.061 19 C -0.107 4.107 20 C -0.139 4.139 21 O -0.336 6.336 22 Si 0.606 3.394 23 C -0.143 4.143 24 C -0.152 4.152 25 C -0.148 4.148 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.086 0.914 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.232 0.768 38 H 0.230 0.770 39 H 0.151 0.849 40 H 0.232 0.768 41 H -0.178 1.178 42 H -0.171 1.171 43 H 0.179 0.821 44 H 0.091 0.909 45 H 0.087 0.913 46 H 0.088 0.912 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -3.917 -2.223 -3.225 5.539 hybrid contribution -0.138 -0.510 0.651 0.838 sum -4.054 -2.733 -2.574 5.526 Atomic orbital electron populations 1.21818 0.92344 1.03262 1.03627 1.23071 0.95581 0.79928 1.02714 1.86504 1.24497 1.32678 1.83803 1.23808 0.80640 0.92716 0.72187 1.90690 1.60469 1.43190 1.44993 1.21152 0.96888 0.89633 1.02192 0.87178 1.21440 0.91383 0.97170 1.04097 1.21512 1.01192 0.94788 0.97398 1.21487 0.95778 0.94817 1.00077 0.90017 1.21449 1.00578 0.91819 0.86046 1.45835 1.56562 1.14350 1.21257 1.17252 0.79201 0.80917 0.85218 1.90830 1.38558 1.65333 1.46043 1.21539 1.08163 0.97102 0.97342 1.24455 0.98989 0.93944 0.86595 1.83681 1.59989 1.20764 1.41709 1.22739 1.01439 0.89021 0.97452 1.24471 0.91316 0.91945 1.06184 1.86581 1.24191 1.47524 1.75255 0.94250 0.79254 0.86355 0.79520 1.22552 1.01619 0.95285 0.94853 1.21628 0.94327 0.96179 1.03021 1.21529 1.01569 0.95634 0.96083 0.91389 0.90022 0.91376 0.91152 0.91143 0.90720 0.90560 0.90577 0.91013 0.90941 0.90966 0.76805 0.77025 0.84918 0.76811 1.17773 1.17130 0.82060 0.90921 0.91299 0.91186 0.90198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.40 10.12 -39.26 -0.40 -0.80 16 4 C 0.46 0.68 7.26 36.00 0.26 0.94 16 5 O -0.51 -2.28 15.73 -18.76 -0.30 -2.57 16 6 C -0.08 0.13 2.63 -91.78 -0.24 -0.11 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 8 C -0.10 0.16 4.49 -26.73 -0.12 0.04 16 9 C -0.11 0.33 5.20 -26.73 -0.14 0.19 16 10 C -0.10 0.36 2.23 -90.62 -0.20 0.16 16 11 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 12 C 0.12 -0.19 5.06 -4.04 -0.02 -0.21 16 13 N -0.73 1.11 5.28 -61.40 -0.32 0.78 16 14 C 0.59 1.34 7.81 -12.54 -0.10 1.24 16 15 O -0.53 -3.61 16.98 5.26 0.09 -3.52 16 16 C -0.24 -0.22 6.31 -103.27 -0.65 -0.87 16 17 C 0.03 -0.07 11.61 30.08 0.35 0.28 16 18 O -0.17 0.14 8.90 7.64 0.07 0.21 16 19 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 20 C -0.03 0.03 2.97 36.01 0.11 0.13 16 21 O -0.53 0.26 12.88 -35.23 -0.45 -0.19 16 22 Si 0.71 -1.23 32.09 -169.99 -5.46 -6.68 16 23 C -0.12 -0.23 10.90 -37.45 -0.41 -0.63 16 24 C -0.11 0.45 5.07 -26.73 -0.14 0.31 16 25 C -0.11 0.33 5.14 -26.73 -0.14 0.20 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 30 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 31 H 0.07 -0.05 8.10 -51.93 -0.42 -0.47 16 32 H 0.08 -0.04 8.10 -51.93 -0.42 -0.47 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.40 -1.85 6.62 -40.82 -0.27 -2.12 16 38 H 0.21 -1.45 7.47 -52.49 -0.39 -1.84 16 39 H 0.13 -0.14 7.96 -51.93 -0.41 -0.56 16 40 H 0.38 -1.70 8.70 45.56 0.40 -1.30 16 41 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 42 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 43 H 0.16 0.39 8.06 -52.49 -0.42 -0.03 16 44 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.07 -0.33 7.18 -51.92 -0.37 -0.70 16 46 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 47 H 0.08 -0.23 8.11 -51.93 -0.42 -0.65 16 LS Contribution 391.69 15.07 5.90 5.90 Total: 0.00 -10.59 391.69 -9.34 -19.93 By element: Atomic # 1 Polarization: -7.97 SS G_CDS: -7.43 Total: -15.40 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: -1.04 Total: 2.34 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.32 Total: 0.78 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -0.99 Total: -6.87 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.46 Total: -6.68 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -10.59 -9.34 -19.93 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13456056.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.819 kcal (2) G-P(sol) polarization free energy of solvation -10.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds