Wall clock time and date at job start Sun Mar 7 2021 07:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45205 * 109.46629 * 2 1 4 4 C 1.34235 * 116.99539 * 180.02562 * 3 2 1 5 5 O 1.20820 * 120.00241 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99663 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.47080 * 300.00127 * 6 4 3 8 8 C 1.53002 * 109.47044 * 60.00220 * 6 4 3 9 9 C 1.53004 * 109.47059 * 180.02562 * 8 6 4 10 10 C 1.52995 * 109.46907 * 299.99674 * 9 8 6 11 11 H 1.08999 * 109.47414 * 300.00588 * 10 9 8 12 12 C 1.52996 * 109.47350 * 179.97438 * 10 9 8 13 13 N 1.46499 * 109.47023 * 64.99924 * 12 10 9 14 14 C 1.34777 * 120.00195 * 179.97438 * 13 12 10 15 15 O 1.21693 * 120.00018 * 0.02562 * 14 13 12 16 16 C 1.46682 * 119.99810 * 180.27605 * 14 13 12 17 17 C 1.37868 * 126.23247 * 179.72519 * 16 14 13 18 18 C 1.50707 * 126.45641 * 0.02562 * 17 16 14 19 19 C 1.39835 * 107.09022 * 180.02562 * 17 16 14 20 20 C 1.35459 * 107.86167 * 0.02562 * 19 17 16 21 21 C 1.50699 * 125.56346 * 179.97438 * 20 19 17 22 22 O 1.42896 * 109.46914 * 65.00142 * 21 20 19 23 23 Si 1.86305 * 109.46775 * 185.00280 * 21 20 19 24 24 N 1.35536 * 108.86691 * 359.73268 * 20 19 17 25 25 C 1.53003 * 109.47323 * 60.00099 * 10 9 8 26 26 C 1.52997 * 109.47292 * 300.00239 * 25 10 9 27 27 H 1.09004 * 109.46909 * 299.99797 * 1 2 3 28 28 H 1.08994 * 109.47309 * 60.00136 * 1 2 3 29 29 H 1.09003 * 109.46785 * 180.02562 * 1 2 3 30 30 H 1.08995 * 109.47089 * 240.00420 * 2 1 3 31 31 H 1.08994 * 109.47309 * 119.99864 * 2 1 3 32 32 H 1.08997 * 109.46706 * 299.99595 * 8 6 4 33 33 H 1.09000 * 109.47257 * 60.00016 * 8 6 4 34 34 H 1.09001 * 109.46997 * 180.02562 * 9 8 6 35 35 H 1.09000 * 109.47124 * 59.99872 * 9 8 6 36 36 H 1.08998 * 109.47328 * 305.00259 * 12 10 9 37 37 H 1.08997 * 109.47540 * 185.00005 * 12 10 9 38 38 H 0.97000 * 120.00069 * 0.02562 * 13 12 10 39 39 H 1.08992 * 109.47015 * 90.00203 * 18 17 16 40 40 H 1.09006 * 109.46893 * 209.99751 * 18 17 16 41 41 H 1.08994 * 109.47207 * 329.99592 * 18 17 16 42 42 H 1.08000 * 126.07168 * 180.02562 * 19 17 16 43 43 H 1.08996 * 109.47336 * 304.99883 * 21 20 19 44 44 H 0.96700 * 113.99837 * 60.00456 * 22 21 20 45 45 H 1.48495 * 109.99953 * 58.68187 * 23 21 20 46 46 H 1.48502 * 109.99579 * 180.02562 * 23 21 20 47 47 H 0.97003 * 125.67180 * 180.26087 * 24 20 19 48 48 H 1.09000 * 109.46940 * 59.99660 * 25 10 9 49 49 H 1.09002 * 109.47693 * 179.97438 * 25 10 9 50 50 H 1.08997 * 109.47684 * 179.97438 * 26 25 10 51 51 H 1.09006 * 109.46907 * 299.99937 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9206 2.9376 -0.0012 7 1 3.5843 3.4694 -0.8912 8 6 3.4495 3.6848 1.2481 9 6 4.0337 5.0989 1.2471 10 6 5.5616 5.0195 1.2463 11 1 5.8983 4.4878 2.1363 12 6 6.1459 6.4335 1.2447 13 7 5.7936 7.1088 2.4961 14 6 6.2039 8.3732 2.7183 15 8 6.8667 8.9541 1.8791 16 6 5.8563 9.0472 3.9738 17 6 6.2108 10.3294 4.3357 18 6 7.0251 11.2981 3.5173 19 6 5.6724 10.5619 5.6051 20 6 5.0135 9.4421 5.9884 21 6 4.2839 9.2581 7.2941 22 8 3.1735 10.1558 7.3498 23 14 3.6710 7.5033 7.4209 24 7 5.1130 8.5163 5.0035 25 6 6.0328 4.2722 -0.0029 26 6 5.4485 2.8581 -0.0020 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 1.8933 -0.5137 -0.8900 31 1 1.8934 -0.5138 0.8899 32 1 2.3610 3.7418 1.2484 33 1 3.7858 3.1530 2.1381 34 1 3.6984 5.6311 2.1374 35 1 3.6970 5.6306 0.3571 36 1 5.7393 6.9937 0.4027 37 1 7.2307 6.3783 1.1546 38 1 5.2656 6.6457 3.1652 39 1 6.3606 11.8912 2.8891 40 1 7.5811 11.9584 4.1830 41 1 7.7227 10.7454 2.8881 42 1 5.7654 11.4725 6.1783 43 1 4.9618 9.4668 8.1217 44 1 2.5278 10.0271 6.6416 45 1 4.8133 6.5587 7.3321 46 1 2.9490 7.3090 8.7040 47 1 4.7267 7.6267 5.0223 48 1 5.6961 4.8038 -0.8929 49 1 7.1213 4.2159 -0.0038 50 1 5.7838 2.3259 -0.8922 51 1 5.7852 2.3265 0.8880 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_13940406.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:05 Heat of formation + Delta-G solvation = -132.022613 kcal Electronic energy + Delta-G solvation = -31219.378880 eV Core-core repulsion = 26892.058367 eV Total energy + Delta-G solvation = -4327.320513 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.60460 -41.78050 -40.48141 -39.41749 -37.82174 -37.62217 -36.02493 -33.72968 -33.17071 -32.43621 -31.96430 -31.29705 -28.34328 -28.05524 -26.42534 -24.68265 -23.98813 -23.35920 -22.31768 -21.76896 -21.56914 -20.97278 -20.27426 -19.71382 -18.68108 -17.95722 -17.63113 -17.58392 -16.94252 -16.85113 -16.66058 -16.40656 -15.91643 -15.47493 -15.38857 -15.04814 -15.01855 -14.92796 -14.74448 -14.50651 -14.26941 -14.00532 -13.88320 -13.78555 -13.60126 -13.48415 -13.45498 -13.36257 -13.12720 -12.93550 -12.90478 -12.64386 -12.58729 -12.39461 -12.30295 -12.26121 -11.96691 -11.67833 -11.53362 -11.33626 -11.21746 -10.92802 -10.65939 -10.21808 -9.78312 -9.14572 -5.42367 0.35014 0.94049 1.18965 1.27041 1.62005 1.62439 1.67213 1.89897 2.04898 2.38597 3.24699 3.30046 3.37979 3.44930 3.56432 3.70809 3.79297 3.80330 3.90583 3.94308 3.97671 4.10672 4.16899 4.18493 4.23068 4.25222 4.28950 4.30774 4.32823 4.50752 4.55311 4.63064 4.68175 4.75650 4.79028 4.79761 4.83988 4.89539 4.95263 4.95999 4.96794 5.01827 5.04787 5.10520 5.20352 5.23996 5.30632 5.46136 5.48527 5.69073 5.93567 6.18918 6.38046 6.41242 6.74223 7.14501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.079 4.079 7 H 0.111 0.889 8 C -0.111 4.111 9 C -0.114 4.114 10 C -0.104 4.104 11 H 0.080 0.920 12 C 0.125 3.875 13 N -0.733 5.733 14 C 0.590 3.410 15 O -0.520 6.520 16 C -0.052 4.052 17 C -0.068 4.068 18 C -0.093 4.093 19 C -0.172 4.172 20 C 0.014 3.986 21 C -0.037 4.037 22 O -0.531 6.531 23 Si 0.668 3.332 24 N -0.535 5.535 25 C -0.111 4.111 26 C -0.104 4.104 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.080 0.920 33 H 0.069 0.931 34 H 0.067 0.933 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.393 0.607 39 H 0.069 0.931 40 H 0.064 0.936 41 H 0.081 0.919 42 H 0.146 0.854 43 H 0.129 0.871 44 H 0.381 0.619 45 H -0.250 1.250 46 H -0.241 1.241 47 H 0.410 0.590 48 H 0.072 0.928 49 H 0.075 0.925 50 H 0.076 0.924 51 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.007 -2.131 0.103 5.443 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.393 6.393 6 C -0.099 4.099 7 H 0.129 0.871 8 C -0.148 4.148 9 C -0.151 4.151 10 C -0.123 4.123 11 H 0.098 0.902 12 C 0.002 3.998 13 N -0.385 5.385 14 C 0.378 3.622 15 O -0.396 6.396 16 C -0.165 4.165 17 C -0.077 4.077 18 C -0.150 4.150 19 C -0.197 4.197 20 C -0.102 4.102 21 C -0.149 4.149 22 O -0.336 6.336 23 Si 0.568 3.432 24 N -0.136 5.136 25 C -0.148 4.148 26 C -0.141 4.141 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.099 0.901 33 H 0.088 0.912 34 H 0.086 0.914 35 H 0.092 0.908 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.226 0.774 39 H 0.088 0.912 40 H 0.083 0.917 41 H 0.099 0.901 42 H 0.164 0.836 43 H 0.146 0.854 44 H 0.228 0.772 45 H -0.174 1.174 46 H -0.165 1.165 47 H 0.249 0.751 48 H 0.091 0.909 49 H 0.094 0.906 50 H 0.095 0.905 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -4.039 -2.746 0.422 4.903 hybrid contribution -0.073 -0.579 0.561 0.810 sum -4.112 -3.326 0.983 5.380 Atomic orbital electron populations 1.21820 0.92327 1.03264 1.03637 1.23072 0.95593 0.79921 1.02707 1.86507 1.24479 1.32672 1.83808 1.23805 0.80652 0.92713 0.72199 1.90688 1.60467 1.43205 1.44974 1.21152 0.96873 0.89642 1.02184 0.87133 1.21535 1.01619 0.95613 0.96078 1.21628 0.94291 0.96195 1.03018 1.21500 0.95838 0.94882 1.00069 0.90154 1.21452 1.00618 0.91787 0.85975 1.45905 1.56814 1.14586 1.21236 1.17002 0.79490 0.80859 0.84880 1.90851 1.38614 1.65162 1.44927 1.20182 1.08302 0.96378 0.91593 1.20047 0.99634 0.92732 0.95291 1.20389 0.98888 0.97047 0.98672 1.20647 1.03452 0.98699 0.96855 1.20847 1.05603 0.91121 0.92655 1.24529 0.90243 1.05972 0.94190 1.86568 1.33468 1.59313 1.54225 0.95638 0.84256 0.74492 0.88764 1.41964 1.42705 1.14446 1.14488 1.21507 1.01193 0.94776 0.97369 1.21443 0.91418 0.97179 1.04084 0.91387 0.91352 0.90033 0.91141 0.91172 0.90120 0.91232 0.91389 0.90798 0.90773 0.90897 0.77357 0.91201 0.91741 0.90053 0.83592 0.85400 0.77173 1.17433 1.16488 0.75081 0.90948 0.90592 0.90539 0.90776 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.33 10.29 37.16 0.38 0.72 16 2 C 0.06 -0.01 6.19 37.16 0.23 0.22 16 3 O -0.36 -0.30 10.12 -39.27 -0.40 -0.70 16 4 C 0.46 0.56 7.26 36.01 0.26 0.82 16 5 O -0.51 -2.19 15.73 -18.74 -0.29 -2.49 16 6 C -0.08 0.15 2.63 -91.77 -0.24 -0.09 16 7 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 8 C -0.11 0.38 5.14 -26.73 -0.14 0.24 16 9 C -0.11 0.50 5.08 -26.73 -0.14 0.36 16 10 C -0.10 0.39 2.23 -90.62 -0.20 0.19 16 11 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 12 C 0.12 -0.25 5.06 -4.04 -0.02 -0.27 16 13 N -0.73 1.25 5.28 -61.62 -0.33 0.93 16 14 C 0.59 1.07 7.79 -12.85 -0.10 0.97 16 15 O -0.52 -2.78 14.80 5.20 0.08 -2.70 16 16 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 17 C -0.07 -0.16 6.21 -104.16 -0.65 -0.80 16 18 C -0.09 -0.20 9.83 36.01 0.35 0.16 16 19 C -0.17 -0.21 10.66 -39.98 -0.43 -0.64 16 20 C 0.01 -0.01 6.10 -81.95 -0.50 -0.51 16 21 C -0.04 0.07 2.98 36.01 0.11 0.18 16 22 O -0.53 0.63 12.88 -35.23 -0.45 0.17 16 23 Si 0.67 -2.23 30.98 -169.99 -5.27 -7.49 16 24 N -0.54 0.88 5.47 -5.69 -0.03 0.85 16 25 C -0.11 0.35 5.20 -26.73 -0.14 0.22 16 26 C -0.10 0.18 4.50 -26.73 -0.12 0.06 16 27 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 28 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 29 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.07 0.00 8.13 -51.93 -0.42 -0.42 16 31 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 32 H 0.08 -0.27 8.11 -51.93 -0.42 -0.69 16 33 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.07 -0.36 7.18 -51.93 -0.37 -0.74 16 35 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.39 -1.73 6.78 -40.82 -0.28 -2.01 16 39 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 40 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 41 H 0.08 0.29 6.48 -51.93 -0.34 -0.05 16 42 H 0.15 0.09 8.06 -52.49 -0.42 -0.33 16 43 H 0.13 -0.19 7.96 -51.93 -0.41 -0.61 16 44 H 0.38 -1.89 8.70 45.56 0.40 -1.49 16 45 H -0.25 0.31 7.11 56.52 0.40 0.71 16 46 H -0.24 -0.04 7.11 56.52 0.40 0.36 16 47 H 0.41 -1.93 6.00 -40.82 -0.24 -2.18 16 48 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 49 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 50 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 51 H 0.07 -0.06 8.10 -51.93 -0.42 -0.48 16 LS Contribution 411.25 15.07 6.20 6.20 Total: 0.00 -9.66 411.25 -10.88 -20.53 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -8.47 Total: -16.49 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -1.91 Total: 1.19 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -0.36 Total: 1.78 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -1.07 Total: -5.72 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: -5.27 Total: -7.49 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.66 -10.88 -20.53 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_13940406.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.488 kcal (2) G-P(sol) polarization free energy of solvation -9.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.534 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds