Wall clock time and date at job start Sun Mar 7 2021 07:16:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 O 1.45203 * 109.46811 * 2 1 4 4 C 1.34224 * 116.99978 * 180.02562 * 3 2 1 5 5 O 1.20827 * 119.99934 * 359.97438 * 4 3 2 6 6 C 1.50696 * 120.00303 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.47467 * 59.99366 * 6 4 3 8 8 C 1.53000 * 109.47324 * 179.97438 * 6 4 3 9 9 C 1.53001 * 109.47286 * 179.97438 * 8 6 4 10 10 C 1.52998 * 109.47376 * 300.00407 * 9 8 6 11 11 H 1.08998 * 109.47190 * 299.99964 * 10 9 8 12 12 C 1.52995 * 109.46998 * 179.97438 * 10 9 8 13 13 N 1.46505 * 109.47121 * 175.00176 * 12 10 9 14 14 C 1.34772 * 120.00173 * 180.02562 * 13 12 10 15 15 O 1.21286 * 119.99960 * 359.97438 * 14 13 12 16 16 C 1.50697 * 120.00265 * 179.97438 * 14 13 12 17 17 C 1.50696 * 109.47484 * 179.97438 * 16 14 13 18 18 C 1.34854 * 125.89121 * 275.32341 * 17 16 14 19 19 C 1.40890 * 107.41722 * 180.15763 * 18 17 16 20 20 C 1.34856 * 107.41764 * 359.55980 * 19 18 17 21 21 C 1.50695 * 125.88889 * 180.28203 * 20 19 18 22 22 O 1.42904 * 109.46781 * 119.98586 * 21 20 19 23 23 Si 1.86291 * 109.47397 * 359.97438 * 21 20 19 24 24 N 1.36337 * 108.21648 * 0.27154 * 20 19 18 25 25 C 1.53000 * 109.47245 * 59.99568 * 10 9 8 26 26 C 1.52998 * 109.46885 * 299.99751 * 6 4 3 27 27 H 1.08999 * 109.47195 * 300.00027 * 1 2 3 28 28 H 1.09001 * 109.47043 * 60.00595 * 1 2 3 29 29 H 1.09006 * 109.46872 * 180.02562 * 1 2 3 30 30 H 1.08999 * 109.47195 * 239.99973 * 2 1 3 31 31 H 1.09001 * 109.47043 * 119.99405 * 2 1 3 32 32 H 1.09002 * 109.47091 * 60.00081 * 8 6 4 33 33 H 1.08992 * 109.47245 * 299.99843 * 8 6 4 34 34 H 1.08995 * 109.47054 * 179.97438 * 9 8 6 35 35 H 1.09002 * 109.46517 * 60.00308 * 9 8 6 36 36 H 1.08996 * 109.47628 * 55.00155 * 12 10 9 37 37 H 1.09000 * 109.47219 * 294.99488 * 12 10 9 38 38 H 0.97000 * 119.99680 * 359.97438 * 13 12 10 39 39 H 1.09001 * 109.47211 * 59.98915 * 16 14 13 40 40 H 1.09004 * 109.46963 * 299.99521 * 16 14 13 41 41 H 1.07999 * 126.28920 * 0.02562 * 18 17 16 42 42 H 1.08002 * 126.29400 * 179.83402 * 19 18 17 43 43 H 1.09003 * 109.47396 * 239.97698 * 21 20 19 44 44 H 0.96696 * 114.00303 * 180.02562 * 22 21 20 45 45 H 1.48498 * 110.00319 * 298.67715 * 23 21 20 46 46 H 1.48508 * 110.00352 * 59.99641 * 23 21 20 47 47 H 0.97005 * 125.63361 * 179.97438 * 24 20 19 48 48 H 1.09002 * 109.47091 * 59.99827 * 25 10 9 49 49 H 1.09001 * 109.47337 * 180.02562 * 25 10 9 50 50 H 1.09002 * 109.47217 * 299.99727 * 26 6 4 51 51 H 1.08995 * 109.47494 * 59.99955 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 -0.0005 5 8 4.0807 0.5868 -0.0005 6 6 3.9207 2.9375 -0.0012 7 1 3.5850 3.4699 0.8887 8 6 5.4486 2.8575 -0.0010 9 6 6.0333 4.2713 -0.0023 10 6 5.5618 5.0172 -1.2522 11 1 5.8977 4.4843 -2.1417 12 6 6.1461 6.4312 -1.2530 13 7 5.7933 7.1046 -2.5054 14 6 6.2036 8.3686 -2.7296 15 8 6.8645 8.9488 -1.8944 16 6 5.8412 9.0611 -4.0181 17 6 6.4166 10.4539 -4.0189 18 6 5.8466 11.5451 -3.4686 19 6 6.7114 12.6335 -3.6977 20 6 7.7816 12.1641 -4.3707 21 6 8.9669 12.9773 -4.8232 22 8 10.1563 12.4599 -4.2235 23 14 8.7341 14.7530 -4.3101 24 7 7.6063 10.8270 -4.5708 25 6 4.0339 5.0972 -1.2523 26 6 3.4487 3.6840 -1.2505 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5137 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5137 0.8901 32 1 5.7846 2.3249 -0.8908 33 1 5.7845 2.3258 0.8891 34 1 7.1218 4.2142 -0.0018 35 1 5.6974 4.8042 0.8873 36 1 7.2309 6.3761 -1.1632 37 1 5.7399 6.9927 -0.4117 38 1 5.2650 6.6404 -3.1735 39 1 4.7564 9.1164 -4.1082 40 1 6.2475 8.4993 -4.8592 41 1 4.9000 11.5789 -2.9498 42 1 6.5494 13.6552 -3.3871 43 1 9.0532 12.9211 -5.9083 44 1 10.9607 12.9364 -4.4705 45 1 7.5178 15.3122 -4.9527 46 1 8.6151 14.8434 -2.8325 47 1 8.2255 10.2383 -5.0302 48 1 3.6979 5.6301 -0.3627 49 1 3.6979 5.6282 -2.1429 50 1 3.7844 3.1516 -2.1404 51 1 2.3602 3.7410 -1.2502 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_14644196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:09 Heat of formation + Delta-G solvation = -130.465544 kcal Electronic energy + Delta-G solvation = -30389.749100 eV Core-core repulsion = 26062.496106 eV Total energy + Delta-G solvation = -4327.252993 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.25588 -41.75753 -40.63414 -39.46414 -37.65682 -37.58371 -35.85156 -33.50949 -32.94233 -32.21129 -31.90259 -31.84660 -29.60542 -27.47870 -25.15904 -24.46691 -23.93459 -23.22309 -21.80619 -21.66479 -21.25861 -21.02308 -20.74698 -18.65599 -18.42921 -18.29112 -17.99332 -17.60345 -17.51314 -16.83070 -16.57236 -16.01253 -15.76563 -15.45249 -15.24558 -15.00683 -14.94793 -14.93078 -14.69358 -14.65315 -14.28976 -14.04344 -13.91793 -13.83863 -13.65602 -13.42903 -13.33118 -13.25222 -13.04268 -12.88684 -12.80490 -12.61523 -12.43954 -12.33943 -12.25349 -11.91949 -11.87091 -11.63658 -11.50909 -11.29134 -11.18330 -10.83346 -10.42094 -10.07704 -9.70089 -8.85955 -4.94660 1.11761 1.21489 1.32787 1.64683 1.68504 1.74821 1.93957 2.11478 2.31035 2.50776 3.34815 3.42525 3.43812 3.49664 3.65290 3.77616 3.83612 3.91845 3.93827 3.97181 3.97851 4.02896 4.04398 4.15808 4.21562 4.26586 4.29139 4.30856 4.33258 4.36116 4.55409 4.56829 4.60298 4.67571 4.71861 4.77721 4.83277 4.84304 4.89096 4.94383 4.98920 5.01302 5.05252 5.14810 5.27518 5.30871 5.36458 5.41679 5.48550 6.07255 6.20650 6.44385 6.58376 6.70007 6.76740 7.25896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.102 4.102 11 H 0.080 0.920 12 C 0.124 3.876 13 N -0.733 5.733 14 C 0.509 3.491 15 O -0.521 6.521 16 C -0.071 4.071 17 C 0.036 3.964 18 C -0.170 4.170 19 C -0.196 4.196 20 C 0.036 3.964 21 C -0.053 4.053 22 O -0.550 6.550 23 Si 0.714 3.286 24 N -0.532 5.532 25 C -0.113 4.113 26 C -0.111 4.111 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.081 0.919 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.074 0.926 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.070 0.930 38 H 0.400 0.600 39 H 0.117 0.883 40 H 0.100 0.900 41 H 0.137 0.863 42 H 0.133 0.867 43 H 0.070 0.930 44 H 0.383 0.617 45 H -0.254 1.254 46 H -0.250 1.250 47 H 0.413 0.587 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.069 0.931 51 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.669 -0.152 -4.608 4.903 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.121 4.121 11 H 0.099 0.901 12 C 0.000 4.000 13 N -0.386 5.386 14 C 0.294 3.706 15 O -0.395 6.395 16 C -0.111 4.111 17 C -0.077 4.077 18 C -0.195 4.195 19 C -0.220 4.220 20 C -0.077 4.077 21 C -0.163 4.163 22 O -0.356 6.356 23 Si 0.613 3.387 24 N -0.127 5.127 25 C -0.151 4.151 26 C -0.148 4.148 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.088 0.912 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.090 0.910 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.235 0.765 39 H 0.135 0.865 40 H 0.118 0.882 41 H 0.155 0.845 42 H 0.151 0.849 43 H 0.088 0.912 44 H 0.231 0.769 45 H -0.179 1.179 46 H -0.174 1.174 47 H 0.250 0.750 48 H 0.090 0.910 49 H 0.088 0.912 50 H 0.088 0.912 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.837 0.018 -3.395 3.860 hybrid contribution -0.250 -1.439 -0.603 1.581 sum -2.087 -1.422 -3.998 4.729 Atomic orbital electron populations 1.21821 0.92334 1.03256 1.03635 1.23075 0.95590 0.79930 1.02704 1.86506 1.24494 1.32672 1.83799 1.23807 0.80640 0.92717 0.72169 1.90687 1.60469 1.43203 1.45018 1.21152 0.96868 0.89634 1.02203 0.87177 1.21439 0.91416 0.97174 1.04052 1.21513 1.01126 0.94810 0.97465 1.21475 0.95810 0.94892 0.99916 0.90136 1.21408 1.00309 0.91844 0.86414 1.46009 1.56822 1.14733 1.21072 1.20582 0.79806 0.81394 0.88800 1.90794 1.37576 1.64743 1.46411 1.20125 1.03270 0.91253 0.96502 1.19457 0.88811 0.94794 1.04685 1.20532 1.01742 0.91521 1.05693 1.20507 0.96436 0.99154 1.05943 1.19663 0.97268 0.83896 1.06922 1.24434 0.84396 1.08135 0.99300 1.86518 1.16218 1.60238 1.72659 0.95431 0.86268 0.75367 0.81599 1.41746 1.17220 1.08219 1.45517 1.21614 0.94300 0.96147 1.03037 1.21523 1.01566 0.95697 0.96025 0.91367 0.91384 0.90026 0.91162 0.91143 0.90767 0.90577 0.90678 0.91045 0.91314 0.91163 0.76542 0.86472 0.88193 0.84487 0.84917 0.91185 0.76896 1.17858 1.17387 0.75006 0.90980 0.91179 0.91233 0.90190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.16 0.38 0.65 16 2 C 0.06 0.02 6.19 37.16 0.23 0.25 16 3 O -0.36 -0.52 10.12 -39.24 -0.40 -0.92 16 4 C 0.46 0.85 7.25 36.00 0.26 1.12 16 5 O -0.51 -2.47 15.73 -18.75 -0.29 -2.76 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 8 C -0.10 0.11 4.49 -26.73 -0.12 -0.01 16 9 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 10 C -0.10 0.30 2.23 -90.62 -0.20 0.10 16 11 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 12 C 0.12 -0.13 5.06 -4.04 -0.02 -0.15 16 13 N -0.73 1.13 5.28 -60.30 -0.32 0.81 16 14 C 0.51 0.81 7.82 -10.99 -0.09 0.72 16 15 O -0.52 -3.59 16.03 5.55 0.09 -3.50 16 16 C -0.07 0.06 6.24 -29.04 -0.18 -0.12 16 17 C 0.04 0.10 5.66 -81.79 -0.46 -0.36 16 18 C -0.17 -0.74 10.77 -39.78 -0.43 -1.17 16 19 C -0.20 -0.98 9.37 -39.78 -0.37 -1.36 16 20 C 0.04 0.15 6.54 -81.79 -0.53 -0.39 16 21 C -0.05 -0.05 3.07 36.00 0.11 0.06 16 22 O -0.55 -0.73 12.86 -35.23 -0.45 -1.18 16 23 Si 0.71 -0.15 30.58 -169.99 -5.20 -5.34 16 24 N -0.53 -1.58 6.07 -5.44 -0.03 -1.61 16 25 C -0.11 0.39 5.07 -26.75 -0.14 0.25 16 26 C -0.11 0.28 5.13 -26.75 -0.14 0.14 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.07 -0.01 8.10 -51.93 -0.42 -0.43 16 33 H 0.08 -0.01 8.10 -51.93 -0.42 -0.43 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.40 -1.78 7.66 -40.82 -0.31 -2.09 16 39 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 41 H 0.14 0.39 8.06 -52.49 -0.42 -0.03 16 42 H 0.13 0.58 6.22 -52.49 -0.33 0.25 16 43 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 44 H 0.38 -1.56 8.74 45.56 0.40 -1.16 16 45 H -0.25 -0.54 7.11 56.52 0.40 -0.13 16 46 H -0.25 -0.91 7.11 56.52 0.40 -0.50 16 47 H 0.41 0.33 8.96 -40.82 -0.37 -0.04 16 48 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 49 H 0.07 -0.30 7.18 -51.93 -0.37 -0.67 16 50 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 51 H 0.08 -0.19 8.11 -51.93 -0.42 -0.61 16 LS Contribution 415.13 15.07 6.26 6.26 Total: 0.00 -12.51 415.13 -11.04 -23.56 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -8.62 Total: -15.00 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -2.08 Total: -0.30 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: -0.35 Total: -0.80 kcal Atomic # 8 Polarization: -7.31 SS G_CDS: -1.06 Total: -8.37 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.20 Total: -5.34 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -12.51 -11.04 -23.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_14644196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.910 kcal (2) G-P(sol) polarization free energy of solvation -12.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.044 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.556 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds