Wall clock time and date at job start Sun Mar 7 2021 07:16:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45197 * 109.47020 * 2 1 4 4 C 1.34228 * 116.99705 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00410 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00149 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.46881 * 300.00530 * 6 4 3 8 8 C 1.53005 * 109.46541 * 60.00097 * 6 4 3 9 9 C 1.53005 * 109.46756 * 180.02562 * 8 6 4 10 10 C 1.52995 * 109.47227 * 300.00168 * 9 8 6 11 11 H 1.09003 * 109.47080 * 300.00317 * 10 9 8 12 12 C 1.52994 * 109.47377 * 180.02562 * 10 9 8 13 13 N 1.46498 * 109.47281 * 64.99594 * 12 10 9 14 14 C 1.34774 * 120.00027 * 180.02562 * 13 12 10 15 15 O 1.21285 * 120.00303 * 0.02562 * 14 13 12 16 16 C 1.50698 * 120.00023 * 180.02562 * 14 13 12 17 17 C 1.53038 * 109.34347 * 179.07586 * 16 14 13 18 18 C 1.53542 * 108.56694 * 169.76740 * 17 16 14 19 19 N 1.47032 * 107.71087 * 299.14343 * 18 17 16 20 20 C 1.38933 * 118.88079 * 43.63341 * 19 18 17 21 21 C 1.31118 * 121.84752 * 346.68199 * 20 19 18 22 22 C 1.50696 * 118.54424 * 180.38560 * 21 20 19 23 23 O 1.42905 * 109.47006 * 119.99752 * 22 21 20 24 24 Si 1.86306 * 109.47261 * 359.97438 * 22 21 20 25 25 C 1.53003 * 109.47433 * 59.99667 * 10 9 8 26 26 C 1.52994 * 109.47404 * 300.00675 * 25 10 9 27 27 H 1.09000 * 109.47593 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47677 * 300.00649 * 1 2 3 29 29 H 1.09004 * 109.47260 * 60.00676 * 1 2 3 30 30 H 1.08994 * 109.47076 * 239.98965 * 2 1 3 31 31 H 1.09006 * 109.46539 * 119.99489 * 2 1 3 32 32 H 1.09001 * 109.47159 * 300.00112 * 8 6 4 33 33 H 1.08991 * 109.47048 * 60.00491 * 8 6 4 34 34 H 1.08997 * 109.46702 * 179.97438 * 9 8 6 35 35 H 1.09000 * 109.46851 * 60.00320 * 9 8 6 36 36 H 1.09007 * 109.46779 * 304.99574 * 12 10 9 37 37 H 1.08993 * 109.47474 * 185.00154 * 12 10 9 38 38 H 0.96997 * 120.00319 * 0.02562 * 13 12 10 39 39 H 1.08999 * 109.18999 * 59.57287 * 16 14 13 40 40 H 1.09004 * 109.56761 * 50.07474 * 17 16 14 41 41 H 1.09001 * 109.67432 * 289.52354 * 17 16 14 42 42 H 1.09002 * 109.82440 * 179.57311 * 18 17 16 43 43 H 1.08998 * 109.82054 * 58.71325 * 18 17 16 44 44 H 0.96996 * 120.56152 * 223.60951 * 19 18 17 45 45 H 1.07998 * 119.06966 * 166.66174 * 20 19 18 46 46 H 1.08996 * 109.47477 * 240.00072 * 22 21 20 47 47 H 0.96697 * 113.99797 * 299.99695 * 23 22 21 48 48 H 1.48495 * 110.00182 * 179.97438 * 24 22 21 49 49 H 1.48496 * 109.99947 * 301.32133 * 24 22 21 50 50 H 1.09003 * 109.46457 * 60.00268 * 25 10 9 51 51 H 1.08997 * 109.47579 * 179.97438 * 25 10 9 52 52 H 1.09001 * 109.47414 * 179.97438 * 26 25 10 53 53 H 1.09002 * 109.46999 * 299.99826 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5852 3.4690 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0329 5.0990 1.2478 10 6 5.5608 5.0195 1.2482 11 1 5.8967 4.4880 2.1387 12 6 6.1452 6.4334 1.2480 13 7 5.7918 7.1080 2.4995 14 6 6.2012 8.3726 2.7223 15 8 6.8618 8.9523 1.8865 16 6 5.8383 9.0664 4.0099 17 6 6.4429 10.4722 4.0162 18 6 5.8572 11.2511 5.2027 19 7 4.4014 11.3292 5.0116 20 6 3.7170 10.1930 4.5983 21 6 4.3429 9.1401 4.1306 22 6 3.5258 7.9511 3.6952 23 8 3.7666 7.6887 2.3112 24 14 1.7165 8.3126 3.9537 25 6 6.0330 4.2718 -0.0003 26 6 5.4486 2.8578 0.0004 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3634 0.5137 -0.8901 30 1 1.8933 -0.5140 -0.8898 31 1 1.8932 -0.5138 0.8901 32 1 2.3601 3.7420 1.2481 33 1 3.7841 3.1533 2.1390 34 1 3.6962 5.6317 2.1371 35 1 3.6970 5.6304 0.3574 36 1 5.7394 6.9941 0.4059 37 1 7.2300 6.3782 1.1587 38 1 5.2632 6.6446 3.1679 39 1 6.2403 8.4982 4.8487 40 1 6.1932 10.9812 3.0851 41 1 7.5258 10.4055 4.1209 42 1 6.2806 12.2551 5.2311 43 1 6.0804 10.7295 6.1334 44 1 3.9269 12.1598 5.1717 45 1 2.6392 10.1766 4.6645 46 1 3.8096 7.0795 4.2850 47 1 3.5361 8.4230 1.7258 48 1 0.8999 7.1479 3.5276 49 1 1.4590 8.6181 5.3839 50 1 5.6971 4.8032 -0.8908 51 1 7.1215 4.2155 -0.0003 52 1 5.7847 2.3253 -0.8893 53 1 5.7845 2.3264 0.8909 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_15608500.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:16 Heat of formation + Delta-G solvation = -127.656272 kcal Electronic energy + Delta-G solvation = -33539.041046 eV Core-core repulsion = 29184.598393 eV Total energy + Delta-G solvation = -4354.442653 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.208 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.69583 -41.37615 -39.68131 -38.83137 -37.75484 -37.45153 -35.40393 -33.55101 -32.90216 -32.78243 -32.03778 -31.65131 -27.95388 -27.00965 -25.65785 -24.39231 -23.73746 -23.26012 -23.01400 -21.46300 -21.39800 -20.68663 -19.44447 -18.89113 -18.55465 -17.92902 -17.52361 -17.41882 -17.29367 -16.73912 -16.27355 -16.04426 -16.01049 -15.49299 -15.33040 -15.13155 -15.02386 -14.79703 -14.61943 -14.51864 -14.31867 -13.98879 -13.87367 -13.80817 -13.48883 -13.32861 -13.20619 -13.06377 -12.92384 -12.76925 -12.59193 -12.54655 -12.17582 -12.09540 -12.03262 -11.90734 -11.84975 -11.69276 -11.48020 -11.41816 -11.39037 -11.03868 -10.98545 -10.44285 -10.39787 -9.24925 -8.52032 -5.06343 1.20179 1.30517 1.34304 1.57232 1.73590 1.94237 2.09257 2.49923 2.59087 3.44638 3.54815 3.62838 3.66536 3.71288 3.80830 3.96863 3.97687 4.01899 4.04087 4.06958 4.20032 4.24650 4.27684 4.31053 4.31957 4.40262 4.41377 4.50255 4.51689 4.53538 4.57336 4.72288 4.73326 4.78512 4.82049 4.84151 4.88660 4.94700 5.02576 5.07020 5.12332 5.16247 5.19134 5.22019 5.28756 5.31932 5.38698 5.44698 5.53746 5.56938 5.85394 6.21838 6.61648 6.75356 6.85390 6.93114 7.65371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.060 3.940 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.508 6.508 6 C -0.078 4.078 7 H 0.109 0.891 8 C -0.112 4.112 9 C -0.110 4.110 10 C -0.099 4.099 11 H 0.072 0.928 12 C 0.133 3.867 13 N -0.690 5.690 14 C 0.530 3.470 15 O -0.555 6.555 16 C -0.040 4.040 17 C -0.118 4.118 18 C 0.119 3.881 19 N -0.749 5.749 20 C 0.154 3.846 21 C -0.283 4.283 22 C -0.054 4.054 23 O -0.528 6.528 24 Si 0.675 3.325 25 C -0.111 4.111 26 C -0.102 4.102 27 H 0.080 0.920 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.064 0.936 34 H 0.089 0.911 35 H 0.068 0.932 36 H 0.066 0.934 37 H 0.058 0.942 38 H 0.400 0.600 39 H 0.088 0.912 40 H 0.081 0.919 41 H 0.078 0.922 42 H 0.082 0.918 43 H 0.060 0.940 44 H 0.403 0.597 45 H 0.130 0.870 46 H 0.102 0.898 47 H 0.369 0.631 48 H -0.256 1.256 49 H -0.264 1.264 50 H 0.069 0.931 51 H 0.071 0.929 52 H 0.073 0.927 53 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.178 3.543 2.363 5.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.306 3.694 5 O -0.395 6.395 6 C -0.097 4.097 7 H 0.127 0.873 8 C -0.150 4.150 9 C -0.147 4.147 10 C -0.118 4.118 11 H 0.091 0.909 12 C 0.009 3.991 13 N -0.344 5.344 14 C 0.316 3.684 15 O -0.433 6.433 16 C -0.061 4.061 17 C -0.157 4.157 18 C -0.006 4.006 19 N -0.378 5.378 20 C 0.032 3.968 21 C -0.294 4.294 22 C -0.166 4.166 23 O -0.334 6.334 24 Si 0.578 3.422 25 C -0.149 4.149 26 C -0.140 4.140 27 H 0.099 0.901 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.083 0.917 34 H 0.107 0.893 35 H 0.087 0.913 36 H 0.084 0.916 37 H 0.076 0.924 38 H 0.238 0.762 39 H 0.106 0.894 40 H 0.100 0.900 41 H 0.097 0.903 42 H 0.101 0.899 43 H 0.078 0.922 44 H 0.237 0.763 45 H 0.147 0.853 46 H 0.119 0.881 47 H 0.218 0.782 48 H -0.181 1.181 49 H -0.190 1.190 50 H 0.088 0.912 51 H 0.090 0.910 52 H 0.091 0.909 53 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -3.929 2.784 2.431 5.394 hybrid contribution -0.020 -0.511 0.673 0.845 sum -3.948 2.273 3.105 5.513 Atomic orbital electron populations 1.21815 0.92406 1.03191 1.03613 1.23054 0.95544 0.80074 1.02648 1.86512 1.24597 1.32521 1.83836 1.23903 0.80565 0.92845 0.72048 1.90677 1.60463 1.43270 1.45133 1.21167 0.96829 0.89391 1.02350 0.87291 1.21586 1.01360 0.96482 0.95577 1.21680 0.93813 0.94898 1.04312 1.21408 0.96312 0.95041 0.98991 0.90946 1.21201 0.98917 0.91614 0.87331 1.45948 1.53975 1.14184 1.20265 1.20195 0.78582 0.81505 0.88130 1.90694 1.40113 1.65427 1.47104 1.19644 0.93201 0.97140 0.96101 1.21697 1.00284 0.94267 0.99413 1.21651 0.80267 1.01019 0.97616 1.44585 1.07163 1.11150 1.74927 1.20360 0.95401 0.87214 0.93799 1.20562 0.94459 0.98872 1.15500 1.24579 1.08336 0.97705 0.86002 1.86856 1.88004 1.43638 1.14919 0.94786 0.76807 0.87058 0.83529 1.21515 1.00814 0.94680 0.97869 1.21427 0.91457 0.97359 1.03746 0.90080 0.91432 0.91368 0.91177 0.91234 0.90612 0.91701 0.89261 0.91281 0.91565 0.92400 0.76224 0.89446 0.90022 0.90321 0.89947 0.92226 0.76266 0.85290 0.88067 0.78228 1.18063 1.19003 0.91217 0.91027 0.90854 0.90972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.17 10.29 37.16 0.38 0.55 16 2 C 0.06 0.06 6.19 37.16 0.23 0.29 16 3 O -0.36 -0.84 10.12 -39.25 -0.40 -1.23 16 4 C 0.46 1.30 7.26 36.01 0.26 1.57 16 5 O -0.51 -2.92 15.73 -18.75 -0.29 -3.21 16 6 C -0.08 0.00 2.63 -91.77 -0.24 -0.24 16 7 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 8 C -0.11 0.11 5.14 -26.73 -0.14 -0.03 16 9 C -0.11 0.21 4.37 -26.73 -0.12 0.09 16 10 C -0.10 0.15 2.22 -90.62 -0.20 -0.05 16 11 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 12 C 0.13 -0.01 4.80 -4.05 -0.02 -0.03 16 13 N -0.69 0.26 2.89 -60.30 -0.17 0.08 16 14 C 0.53 0.96 6.29 -10.99 -0.07 0.89 16 15 O -0.55 -3.34 15.79 5.55 0.09 -3.25 16 16 C -0.04 0.01 2.74 -93.14 -0.26 -0.25 16 17 C -0.12 0.01 4.92 -26.43 -0.13 -0.12 16 18 C 0.12 -0.24 7.15 -3.47 -0.02 -0.27 16 19 N -0.75 1.78 5.83 -60.68 -0.35 1.43 16 20 C 0.15 -0.33 9.63 -16.08 -0.15 -0.48 16 21 C -0.28 0.48 5.26 -101.34 -0.53 -0.06 16 22 C -0.05 0.15 1.83 36.00 0.07 0.22 16 23 O -0.53 1.56 5.04 -35.23 -0.18 1.38 16 24 Si 0.67 -1.80 29.69 -169.99 -5.05 -6.85 16 25 C -0.11 0.14 5.20 -26.73 -0.14 0.00 16 26 C -0.10 0.00 4.50 -26.74 -0.12 -0.12 16 27 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 30 H 0.07 0.07 8.13 -51.93 -0.42 -0.35 16 31 H 0.07 0.07 8.13 -51.93 -0.42 -0.35 16 32 H 0.08 -0.05 8.11 -51.93 -0.42 -0.47 16 33 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.09 -0.17 5.11 -51.93 -0.27 -0.44 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.07 0.05 8.14 -51.92 -0.42 -0.37 16 37 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 38 H 0.40 -0.65 4.93 -40.82 -0.20 -0.85 16 39 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.08 0.16 7.75 -51.93 -0.40 -0.25 16 41 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.40 -1.66 8.96 -40.82 -0.37 -2.03 16 45 H 0.13 -0.47 4.36 -52.49 -0.23 -0.70 16 46 H 0.10 -0.30 7.07 -51.93 -0.37 -0.67 16 47 H 0.37 -1.53 8.70 45.56 0.40 -1.13 16 48 H -0.26 -0.19 7.11 56.52 0.40 0.22 16 49 H -0.26 -0.03 7.10 56.52 0.40 0.37 16 50 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 51 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 52 H 0.07 0.06 8.10 -51.93 -0.42 -0.36 16 53 H 0.07 0.08 8.10 -51.93 -0.42 -0.34 16 LS Contribution 399.30 15.07 6.02 6.02 Total: 0.00 -7.91 399.30 -10.62 -18.53 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -9.08 Total: -14.85 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: -1.20 Total: 1.96 kcal Atomic # 7 Polarization: 2.04 SS G_CDS: -0.53 Total: 1.51 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -0.78 Total: -6.32 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.05 Total: -6.85 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -7.91 -10.62 -18.53 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_15608500.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.127 kcal (2) G-P(sol) polarization free energy of solvation -7.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.530 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds