Wall clock time and date at job start Sun Mar 7 2021 07:16:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.45197 * 109.47020 * 2 1 4 4 C 1.34228 * 116.99705 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00410 * 0.02562 * 4 3 2 6 6 C 1.50704 * 120.00149 * 179.97438 * 4 3 2 7 7 H 1.09000 * 109.46881 * 300.00530 * 6 4 3 8 8 C 1.53005 * 109.46541 * 60.00097 * 6 4 3 9 9 C 1.53005 * 109.46756 * 180.02562 * 8 6 4 10 10 C 1.52995 * 109.47227 * 300.00168 * 9 8 6 11 11 H 1.09003 * 109.47080 * 300.00317 * 10 9 8 12 12 C 1.52994 * 109.47377 * 180.02562 * 10 9 8 13 13 N 1.46498 * 109.47281 * 64.99594 * 12 10 9 14 14 C 1.34774 * 120.00027 * 180.02562 * 13 12 10 15 15 O 1.21285 * 120.00303 * 0.02562 * 14 13 12 16 16 C 1.50698 * 120.00023 * 180.02562 * 14 13 12 17 17 C 1.53038 * 109.34347 * 179.07586 * 16 14 13 18 18 C 1.53542 * 108.56694 * 169.76740 * 17 16 14 19 19 N 1.47032 * 107.71087 * 299.14343 * 18 17 16 20 20 C 1.38933 * 118.88079 * 43.63341 * 19 18 17 21 21 C 1.31118 * 121.84752 * 346.68199 * 20 19 18 22 22 C 1.50696 * 118.54424 * 180.38560 * 21 20 19 23 23 O 1.42905 * 109.47006 * 119.99752 * 22 21 20 24 24 Si 1.86306 * 109.47261 * 359.97438 * 22 21 20 25 25 C 1.53003 * 109.47433 * 59.99667 * 10 9 8 26 26 C 1.52994 * 109.47404 * 300.00675 * 25 10 9 27 27 H 1.09000 * 109.47593 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47677 * 300.00649 * 1 2 3 29 29 H 1.09004 * 109.47260 * 60.00676 * 1 2 3 30 30 H 1.08994 * 109.47076 * 239.98965 * 2 1 3 31 31 H 1.09006 * 109.46539 * 119.99489 * 2 1 3 32 32 H 1.09001 * 109.47159 * 300.00112 * 8 6 4 33 33 H 1.08991 * 109.47048 * 60.00491 * 8 6 4 34 34 H 1.08997 * 109.46702 * 179.97438 * 9 8 6 35 35 H 1.09000 * 109.46851 * 60.00320 * 9 8 6 36 36 H 1.09007 * 109.46779 * 304.99574 * 12 10 9 37 37 H 1.08993 * 109.47474 * 185.00154 * 12 10 9 38 38 H 0.96997 * 120.00319 * 0.02562 * 13 12 10 39 39 H 1.08999 * 109.18999 * 59.57287 * 16 14 13 40 40 H 1.09004 * 109.56761 * 50.07474 * 17 16 14 41 41 H 1.09001 * 109.67432 * 289.52354 * 17 16 14 42 42 H 1.09002 * 109.82440 * 179.57311 * 18 17 16 43 43 H 1.08998 * 109.82054 * 58.71325 * 18 17 16 44 44 H 0.96996 * 120.56152 * 223.60951 * 19 18 17 45 45 H 1.07998 * 119.06966 * 166.66174 * 20 19 18 46 46 H 1.08996 * 109.47477 * 240.00072 * 22 21 20 47 47 H 0.96697 * 113.99797 * 299.99695 * 23 22 21 48 48 H 1.48495 * 110.00182 * 179.97438 * 24 22 21 49 49 H 1.48496 * 109.99947 * 301.32133 * 24 22 21 50 50 H 1.09003 * 109.46457 * 60.00268 * 25 10 9 51 51 H 1.08997 * 109.47579 * 179.97438 * 25 10 9 52 52 H 1.09001 * 109.47414 * 179.97438 * 26 25 10 53 53 H 1.09002 * 109.46999 * 299.99826 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0139 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.5852 3.4690 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0329 5.0990 1.2478 10 6 5.5608 5.0195 1.2482 11 1 5.8967 4.4880 2.1387 12 6 6.1452 6.4334 1.2480 13 7 5.7918 7.1080 2.4995 14 6 6.2012 8.3726 2.7223 15 8 6.8618 8.9523 1.8865 16 6 5.8383 9.0664 4.0099 17 6 6.4429 10.4722 4.0162 18 6 5.8572 11.2511 5.2027 19 7 4.4014 11.3292 5.0116 20 6 3.7170 10.1930 4.5983 21 6 4.3429 9.1401 4.1306 22 6 3.5258 7.9511 3.6952 23 8 3.7666 7.6887 2.3112 24 14 1.7165 8.3126 3.9537 25 6 6.0330 4.2718 -0.0003 26 6 5.4486 2.8578 0.0004 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3634 0.5137 -0.8901 30 1 1.8933 -0.5140 -0.8898 31 1 1.8932 -0.5138 0.8901 32 1 2.3601 3.7420 1.2481 33 1 3.7841 3.1533 2.1390 34 1 3.6962 5.6317 2.1371 35 1 3.6970 5.6304 0.3574 36 1 5.7394 6.9941 0.4059 37 1 7.2300 6.3782 1.1587 38 1 5.2632 6.6446 3.1679 39 1 6.2403 8.4982 4.8487 40 1 6.1932 10.9812 3.0851 41 1 7.5258 10.4055 4.1209 42 1 6.2806 12.2551 5.2311 43 1 6.0804 10.7295 6.1334 44 1 3.9269 12.1598 5.1717 45 1 2.6392 10.1766 4.6645 46 1 3.8096 7.0795 4.2850 47 1 3.5361 8.4230 1.7258 48 1 0.8999 7.1479 3.5276 49 1 1.4590 8.6181 5.3839 50 1 5.6971 4.8032 -0.8908 51 1 7.1215 4.2155 -0.0003 52 1 5.7847 2.3253 -0.8893 53 1 5.7845 2.3264 0.8909 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_15608500.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:16:15 Heat of formation + Delta-G solvation = -123.999096 kcal Electronic energy + Delta-G solvation = -33538.882459 eV Core-core repulsion = 29184.598393 eV Total energy + Delta-G solvation = -4354.284065 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.208 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -41.85193 -41.41880 -39.66616 -38.87549 -37.78188 -37.49956 -35.48682 -33.51405 -32.91483 -32.66224 -32.03483 -31.62375 -27.96466 -26.90160 -25.58916 -24.40040 -23.69801 -23.20142 -23.03544 -21.53807 -21.46019 -20.67947 -19.31919 -18.78748 -18.71587 -17.94799 -17.68112 -17.53206 -17.25492 -16.66489 -16.31014 -15.98563 -15.89038 -15.50474 -15.31139 -15.12017 -14.98303 -14.78004 -14.62514 -14.53989 -14.31721 -13.95115 -13.85091 -13.74821 -13.50985 -13.35964 -13.17001 -13.02829 -12.96863 -12.83892 -12.57829 -12.49158 -12.19610 -12.05882 -12.02009 -11.82265 -11.79772 -11.75925 -11.59288 -11.38242 -11.30284 -11.10682 -10.97716 -10.55523 -10.33091 -9.28156 -8.35821 -4.87031 1.09023 1.35520 1.52583 1.63458 1.71407 1.97753 2.08542 2.53629 2.72874 3.46032 3.63916 3.65958 3.71891 3.81812 3.93041 3.95183 3.96490 4.01400 4.06879 4.08944 4.23178 4.27167 4.30638 4.33309 4.41765 4.45399 4.47022 4.55659 4.55969 4.66087 4.71087 4.77128 4.80430 4.84719 4.85868 4.87696 4.94241 4.97464 5.04856 5.11249 5.13505 5.16840 5.25434 5.29168 5.32565 5.34143 5.42249 5.51584 5.53948 5.63027 5.79596 6.38182 6.65046 6.83615 6.94290 7.02537 7.56402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.075 4.075 7 H 0.125 0.875 8 C -0.107 4.107 9 C -0.102 4.102 10 C -0.089 4.089 11 H 0.072 0.928 12 C 0.138 3.862 13 N -0.676 5.676 14 C 0.529 3.471 15 O -0.601 6.601 16 C -0.037 4.037 17 C -0.116 4.116 18 C 0.122 3.878 19 N -0.748 5.748 20 C 0.154 3.846 21 C -0.292 4.292 22 C -0.050 4.050 23 O -0.534 6.534 24 Si 0.751 3.249 25 C -0.106 4.106 26 C -0.098 4.098 27 H 0.096 0.904 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.066 0.934 31 H 0.065 0.935 32 H 0.077 0.923 33 H 0.059 0.941 34 H 0.094 0.906 35 H 0.074 0.926 36 H 0.060 0.940 37 H 0.042 0.958 38 H 0.408 0.592 39 H 0.094 0.906 40 H 0.060 0.940 41 H 0.070 0.930 42 H 0.095 0.905 43 H 0.063 0.937 44 H 0.412 0.588 45 H 0.145 0.855 46 H 0.107 0.893 47 H 0.377 0.623 48 H -0.300 1.300 49 H -0.298 1.298 50 H 0.077 0.923 51 H 0.070 0.930 52 H 0.063 0.937 53 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.239 4.244 2.860 7.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.021 4.021 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.094 4.094 7 H 0.143 0.857 8 C -0.144 4.144 9 C -0.139 4.139 10 C -0.107 4.107 11 H 0.090 0.910 12 C 0.014 3.986 13 N -0.329 5.329 14 C 0.316 3.684 15 O -0.483 6.483 16 C -0.059 4.059 17 C -0.155 4.155 18 C -0.003 4.003 19 N -0.379 5.379 20 C 0.032 3.968 21 C -0.303 4.303 22 C -0.163 4.163 23 O -0.341 6.341 24 Si 0.660 3.340 25 C -0.144 4.144 26 C -0.136 4.136 27 H 0.114 0.886 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.085 0.915 31 H 0.084 0.916 32 H 0.096 0.904 33 H 0.078 0.922 34 H 0.112 0.888 35 H 0.092 0.908 36 H 0.079 0.921 37 H 0.061 0.939 38 H 0.248 0.752 39 H 0.111 0.889 40 H 0.078 0.922 41 H 0.088 0.912 42 H 0.114 0.886 43 H 0.081 0.919 44 H 0.248 0.752 45 H 0.162 0.838 46 H 0.125 0.875 47 H 0.227 0.773 48 H -0.228 1.228 49 H -0.226 1.226 50 H 0.095 0.905 51 H 0.089 0.911 52 H 0.082 0.918 53 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -5.009 3.496 2.935 6.777 hybrid contribution 0.282 -0.781 0.523 0.982 sum -4.727 2.715 3.458 6.456 Atomic orbital electron populations 1.21818 0.90612 1.04247 1.03753 1.23233 0.96980 0.79529 1.02310 1.86522 1.24376 1.33293 1.83494 1.24476 0.80478 0.93498 0.70853 1.90659 1.61156 1.44585 1.46928 1.21261 0.96531 0.87999 1.03565 0.85684 1.21551 1.01451 0.96669 0.94758 1.21620 0.93159 0.94305 1.04781 1.21307 0.96583 0.93961 0.98881 0.90962 1.21120 0.98010 0.92249 0.87214 1.45882 1.53196 1.13561 1.20257 1.20551 0.77791 0.81742 0.88291 1.90672 1.42312 1.66576 1.48775 1.19628 0.94377 0.96824 0.95023 1.21632 0.99990 0.94584 0.99281 1.21635 0.80498 1.01496 0.96638 1.44650 1.07074 1.11586 1.74565 1.20593 0.96173 0.87002 0.93076 1.20535 0.93586 0.99650 1.16553 1.24593 1.08051 0.97550 0.86063 1.86803 1.88075 1.44215 1.15000 0.93893 0.74847 0.84807 0.80439 1.21476 1.00737 0.93870 0.98306 1.21366 0.91638 0.97847 1.02709 0.88584 0.91261 0.91178 0.91549 0.91633 0.90421 0.92197 0.88809 0.90776 0.92123 0.93948 0.75217 0.88851 0.92167 0.91164 0.88622 0.91879 0.75161 0.83792 0.87548 0.77262 1.22786 1.22576 0.90451 0.91102 0.91787 0.92196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 10.29 71.98 0.74 1.12 16 2 C 0.05 0.13 6.19 71.98 0.45 0.58 16 3 O -0.36 -1.82 10.12 -51.40 -0.52 -2.34 16 4 C 0.46 2.93 7.26 71.24 0.52 3.45 16 5 O -0.54 -7.00 15.73 21.97 0.35 -6.65 16 6 C -0.07 0.00 2.63 -11.54 -0.03 -0.03 16 7 H 0.13 -0.38 8.14 -2.39 -0.02 -0.40 16 8 C -0.11 0.25 5.14 30.60 0.16 0.41 16 9 C -0.10 0.47 4.37 30.59 0.13 0.61 16 10 C -0.09 0.30 2.22 -10.80 -0.02 0.27 16 11 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 12 C 0.14 0.00 4.80 86.38 0.41 0.42 16 13 N -0.68 0.48 2.89 -463.07 -1.34 -0.85 16 14 C 0.53 2.22 6.29 87.66 0.55 2.77 16 15 O -0.60 -8.07 15.79 -3.04 -0.05 -8.12 16 16 C -0.04 0.01 2.74 -12.43 -0.03 -0.02 16 17 C -0.12 -0.06 4.92 30.79 0.15 0.10 16 18 C 0.12 -0.56 7.15 86.46 0.62 0.06 16 19 N -0.75 4.26 5.83 -345.88 -2.02 2.25 16 20 C 0.15 -0.81 9.63 83.41 0.80 0.00 16 21 C -0.29 1.17 5.26 -16.76 -0.09 1.08 16 22 C -0.05 0.33 1.83 71.23 0.13 0.46 16 23 O -0.53 3.56 5.04 -148.98 -0.75 2.81 16 24 Si 0.75 -4.45 29.69 68.60 2.04 -2.41 16 25 C -0.11 0.27 5.20 30.59 0.16 0.43 16 26 C -0.10 -0.06 4.50 30.59 0.14 0.08 16 27 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 28 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 29 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 30 H 0.07 0.20 8.13 -2.39 -0.02 0.18 16 31 H 0.07 0.20 8.13 -2.38 -0.02 0.18 16 32 H 0.08 -0.17 8.11 -2.39 -0.02 -0.19 16 33 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.09 -0.47 5.11 -2.39 -0.01 -0.48 16 35 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 36 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 37 H 0.04 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.41 -1.58 4.93 -92.71 -0.46 -2.03 16 39 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.06 0.30 7.75 -2.38 -0.02 0.28 16 41 H 0.07 0.12 8.14 -2.39 -0.02 0.11 16 42 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 43 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 44 H 0.41 -3.89 8.96 -92.71 -0.83 -4.72 16 45 H 0.15 -1.25 4.36 -2.91 -0.01 -1.27 16 46 H 0.11 -0.78 7.07 -2.39 -0.02 -0.79 16 47 H 0.38 -3.49 8.70 -74.06 -0.64 -4.14 16 48 H -0.30 -0.52 7.11 99.48 0.71 0.19 16 49 H -0.30 0.04 7.10 99.48 0.71 0.75 16 50 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 51 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 52 H 0.06 0.17 8.10 -2.39 -0.02 0.15 16 53 H 0.06 0.19 8.10 -2.39 -0.02 0.17 16 Total: 0.00 -20.14 399.30 1.52 -18.62 By element: Atomic # 1 Polarization: -14.10 SS G_CDS: -0.97 Total: -15.06 kcal Atomic # 6 Polarization: 6.98 SS G_CDS: 4.78 Total: 11.76 kcal Atomic # 7 Polarization: 4.75 SS G_CDS: -3.35 Total: 1.39 kcal Atomic # 8 Polarization: -13.33 SS G_CDS: -0.97 Total: -14.30 kcal Atomic # 14 Polarization: -4.45 SS G_CDS: 2.04 Total: -2.41 kcal Total: -20.14 1.52 -18.62 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_15608500.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.380 kcal (2) G-P(sol) polarization free energy of solvation -20.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.524 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds