Wall clock time and date at job start Sun Mar 7 2021 07:17:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45193 * 109.47067 * 2 1 4 4 C 1.34232 * 116.99900 * 179.97438 * 3 2 1 5 5 O 1.20823 * 119.99833 * 0.02562 * 4 3 2 6 6 C 1.50703 * 120.00102 * 180.02562 * 4 3 2 7 7 H 1.08994 * 109.47293 * 60.00199 * 6 4 3 8 8 C 1.53001 * 109.46867 * 180.02562 * 6 4 3 9 9 C 1.53000 * 109.46723 * 179.97438 * 8 6 4 10 10 C 1.52998 * 109.47321 * 299.99351 * 9 8 6 11 11 H 1.08994 * 109.47396 * 300.00472 * 10 9 8 12 12 C 1.53000 * 109.47321 * 179.97438 * 10 9 8 13 13 N 1.46493 * 109.47120 * 175.00298 * 12 10 9 14 14 C 1.34779 * 120.00215 * 180.02562 * 13 12 10 15 15 O 1.21701 * 119.99662 * 355.02207 * 14 13 12 16 16 C 1.46671 * 120.00154 * 175.02469 * 14 13 12 17 17 C 1.37882 * 126.22786 * 4.87736 * 16 14 13 18 18 C 1.39875 * 107.09255 * 179.88496 * 17 16 14 19 19 Br 1.89098 * 126.07215 * 180.11446 * 18 17 16 20 20 C 1.35507 * 107.85346 * 0.38314 * 18 17 16 21 21 C 1.50699 * 125.57137 * 179.74358 * 20 18 17 22 22 O 1.42900 * 109.47349 * 125.94753 * 21 20 18 23 23 Si 1.86299 * 109.47051 * 245.95079 * 21 20 18 24 24 N 1.35600 * 108.85858 * 359.76107 * 20 18 17 25 25 C 1.46491 * 125.67698 * 180.02562 * 24 20 18 26 26 C 1.53001 * 109.46692 * 60.00630 * 10 9 8 27 27 C 1.52996 * 109.46859 * 299.99978 * 6 4 3 28 28 H 1.09007 * 109.47006 * 59.99506 * 1 2 3 29 29 H 1.08998 * 109.46914 * 300.00038 * 1 2 3 30 30 H 1.08993 * 109.47593 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.46819 * 120.00105 * 2 1 3 32 32 H 1.09003 * 109.46637 * 240.00345 * 2 1 3 33 33 H 1.09004 * 109.46922 * 299.99525 * 8 6 4 34 34 H 1.08994 * 109.47329 * 59.99820 * 8 6 4 35 35 H 1.09002 * 109.47455 * 59.99680 * 9 8 6 36 36 H 1.09005 * 109.47209 * 179.97438 * 9 8 6 37 37 H 1.08998 * 109.47055 * 295.00222 * 12 10 9 38 38 H 1.09000 * 109.46902 * 55.00136 * 12 10 9 39 39 H 0.97000 * 120.00349 * 0.02562 * 13 12 10 40 40 H 1.07999 * 126.45284 * 0.02562 * 17 16 14 41 41 H 1.08999 * 109.46971 * 5.94947 * 21 20 18 42 42 H 0.96699 * 114.00435 * 179.97438 * 22 21 20 43 43 H 1.48499 * 109.99773 * 299.46316 * 23 21 20 44 44 H 1.48502 * 109.99893 * 60.77735 * 23 21 20 45 45 H 1.09004 * 109.47109 * 266.74284 * 25 24 20 46 46 H 1.09000 * 109.47360 * 26.74351 * 25 24 20 47 47 H 1.09004 * 109.47183 * 146.74217 * 25 24 20 48 48 H 1.08996 * 109.47761 * 59.99496 * 26 10 9 49 49 H 1.09004 * 109.46922 * 180.02562 * 26 10 9 50 50 H 1.09009 * 109.47556 * 299.99771 * 27 6 4 51 51 H 1.09000 * 109.47658 * 60.00056 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9208 2.9374 0.0012 7 1 3.5846 3.4692 0.8911 8 6 5.4487 2.8572 0.0010 9 6 6.0335 4.2710 0.0010 10 6 5.5620 5.0180 -1.2482 11 1 5.8979 4.4858 -2.1382 12 6 6.1463 6.4320 -1.2479 13 7 5.7935 7.1064 -2.4996 14 6 6.2038 8.3706 -2.7229 15 8 6.7890 8.9836 -1.8494 16 6 5.9451 9.0077 -4.0184 17 6 5.2163 8.4717 -5.0589 18 6 5.2221 9.4137 -6.0930 19 35 4.3770 9.2267 -7.7742 20 6 5.9459 10.4815 -5.6782 21 6 6.2132 11.7261 -6.4847 22 8 5.8123 12.8748 -5.7352 23 14 8.0329 11.8388 -6.8680 24 7 6.3908 10.2470 -4.4189 25 6 7.2090 11.1606 -3.6178 26 6 4.0341 5.0981 -1.2481 27 6 3.4497 3.6846 -1.2480 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 1.8933 -0.5138 0.8899 32 1 1.8933 -0.5138 -0.8901 33 1 5.7846 2.3246 0.8908 34 1 5.7846 2.3254 -0.8891 35 1 5.6976 4.8032 0.8910 36 1 7.1220 4.2140 0.0014 37 1 5.7401 6.9928 -0.4061 38 1 7.2312 6.3768 -1.1581 39 1 5.2647 6.6431 -3.1679 40 1 4.7303 7.5074 -5.0721 41 1 5.6477 11.6842 -7.4156 42 1 5.9561 13.7137 -6.1940 43 1 8.8141 11.9096 -5.6071 44 1 8.4583 10.6592 -7.6635 45 1 8.2632 10.9201 -3.7557 46 1 7.0257 12.1868 -3.9364 47 1 6.9469 11.0549 -2.5650 48 1 3.6982 5.6302 -0.3581 49 1 3.6981 5.6299 -2.1383 50 1 3.7860 3.1527 -2.1382 51 1 2.3612 3.7417 -1.2485 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_5000100.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:39 Heat of formation + Delta-G solvation = -116.081255 kcal Electronic energy + Delta-G solvation = -33295.565447 eV Core-core repulsion = 28629.118200 eV Total energy + Delta-G solvation = -4666.447246 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.103 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.94176 -41.84297 -40.63121 -39.41602 -37.77676 -37.72863 -36.14343 -34.55867 -33.32977 -32.58928 -31.94223 -31.72513 -31.02986 -28.21359 -27.48787 -26.42952 -24.61558 -23.80596 -23.39635 -22.93003 -21.65602 -21.59680 -20.82563 -20.40514 -18.97003 -18.74703 -18.54036 -17.69220 -17.60491 -17.34633 -17.09183 -16.80381 -16.37441 -15.87367 -15.77283 -15.42373 -15.23388 -15.03937 -14.83586 -14.74345 -14.64527 -14.46559 -14.37880 -14.25267 -13.94609 -13.84221 -13.70076 -13.54619 -13.33379 -13.25958 -13.01754 -12.91191 -12.81508 -12.57701 -12.27846 -12.13716 -12.12214 -11.98772 -11.89162 -11.59658 -11.48643 -11.42949 -11.23979 -11.15320 -11.08861 -10.67716 -10.28305 -9.90123 -9.36239 -5.14219 0.04647 0.52621 0.87998 1.09061 1.25116 1.38673 1.54283 1.63174 1.86696 2.06322 2.19732 3.08349 3.40242 3.46617 3.56989 3.58879 3.65071 3.68789 3.83118 3.93881 3.96108 3.99917 4.02207 4.07073 4.12790 4.25706 4.26203 4.30288 4.36940 4.37597 4.43435 4.49215 4.50345 4.57753 4.63476 4.70919 4.79991 4.82644 4.87204 4.94047 5.06631 5.09735 5.11295 5.14331 5.17191 5.20706 5.26288 5.32855 5.42747 5.48543 5.50974 5.71618 6.32124 6.65036 6.76961 6.96853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.053 3.947 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.125 0.875 8 C -0.099 4.099 9 C -0.106 4.106 10 C -0.093 4.093 11 H 0.088 0.912 12 C 0.129 3.871 13 N -0.700 5.700 14 C 0.589 3.411 15 O -0.577 6.577 16 C -0.054 4.054 17 C -0.102 4.102 18 C -0.179 4.179 19 Br -0.010 7.010 20 C 0.077 3.923 21 C -0.058 4.058 22 O -0.557 6.557 23 Si 0.776 3.224 24 N -0.399 5.399 25 C 0.059 3.941 26 C -0.111 4.111 27 C -0.105 4.105 28 H 0.070 0.930 29 H 0.068 0.932 30 H 0.095 0.905 31 H 0.065 0.935 32 H 0.066 0.934 33 H 0.064 0.936 34 H 0.063 0.937 35 H 0.078 0.922 36 H 0.076 0.924 37 H 0.069 0.931 38 H 0.064 0.936 39 H 0.416 0.584 40 H 0.184 0.816 41 H 0.108 0.892 42 H 0.411 0.589 43 H -0.277 1.277 44 H -0.295 1.295 45 H 0.074 0.926 46 H 0.113 0.887 47 H 0.098 0.902 48 H 0.075 0.925 49 H 0.081 0.919 50 H 0.068 0.932 51 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.353 2.907 -3.022 4.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.143 0.857 8 C -0.137 4.137 9 C -0.144 4.144 10 C -0.111 4.111 11 H 0.106 0.894 12 C 0.006 3.994 13 N -0.352 5.352 14 C 0.376 3.624 15 O -0.459 6.459 16 C -0.168 4.168 17 C -0.129 4.129 18 C -0.265 4.265 19 Br 0.074 6.926 20 C -0.044 4.044 21 C -0.167 4.167 22 O -0.368 6.368 23 Si 0.679 3.321 24 N -0.072 5.072 25 C -0.081 4.081 26 C -0.148 4.148 27 C -0.142 4.142 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.114 0.886 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.083 0.917 34 H 0.082 0.918 35 H 0.097 0.903 36 H 0.095 0.905 37 H 0.087 0.913 38 H 0.083 0.917 39 H 0.254 0.746 40 H 0.202 0.798 41 H 0.125 0.875 42 H 0.265 0.735 43 H -0.204 1.204 44 H -0.222 1.222 45 H 0.092 0.908 46 H 0.131 0.869 47 H 0.116 0.884 48 H 0.094 0.906 49 H 0.099 0.901 50 H 0.086 0.914 51 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.221 2.345 -2.233 3.460 hybrid contribution -0.307 -1.052 0.374 1.158 sum -1.528 1.293 -1.859 2.732 Atomic orbital electron populations 1.21820 0.90650 1.04234 1.03771 1.23229 0.96948 0.79503 1.02323 1.86519 1.24382 1.33301 1.83483 1.24437 0.80484 0.93464 0.70907 1.90666 1.61163 1.44578 1.46862 1.21268 0.96616 0.88095 1.03570 0.85680 1.21380 0.91547 0.97729 1.03040 1.21469 1.01163 0.93910 0.97829 1.21400 0.96129 0.93394 1.00210 0.89389 1.21482 1.00116 0.92579 0.85237 1.45550 1.55051 1.12728 1.21839 1.16930 0.78511 0.82237 0.84677 1.90805 1.44361 1.64212 1.46476 1.20263 1.09770 0.89309 0.97506 1.21551 1.00686 1.00587 0.90092 1.20984 1.09819 0.99140 0.96565 1.96660 1.78517 1.97804 1.19577 1.20110 1.00379 0.98044 0.85819 1.24498 1.13723 0.83101 0.95421 1.86398 1.87712 1.16629 1.46037 0.94754 0.70968 0.86465 0.79908 1.43946 1.37832 1.13757 1.11642 1.22574 0.94254 0.94087 0.97187 1.21611 0.93657 0.95709 1.03826 1.21489 1.01781 0.95795 0.95160 0.91139 0.91265 0.88646 0.91635 0.91520 0.91681 0.91794 0.90318 0.90523 0.91310 0.91748 0.74599 0.79835 0.87467 0.73548 1.20368 1.22194 0.90763 0.86853 0.88396 0.90625 0.90079 0.91368 0.89883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.51 10.29 71.98 0.74 1.25 16 2 C 0.05 0.07 6.19 71.98 0.45 0.52 16 3 O -0.36 -1.24 10.12 -51.43 -0.52 -1.76 16 4 C 0.46 2.04 7.26 71.24 0.52 2.56 16 5 O -0.54 -6.06 15.73 21.97 0.35 -5.71 16 6 C -0.08 0.19 2.63 -11.54 -0.03 0.16 16 7 H 0.13 -0.66 8.14 -2.39 -0.02 -0.68 16 8 C -0.10 0.20 4.49 30.59 0.14 0.34 16 9 C -0.11 0.60 5.20 30.59 0.16 0.76 16 10 C -0.09 0.63 2.23 -10.79 -0.02 0.60 16 11 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 12 C 0.13 -0.37 5.07 86.38 0.44 0.07 16 13 N -0.70 1.14 5.27 -467.09 -2.46 -1.32 16 14 C 0.59 3.53 7.77 86.44 0.67 4.20 16 15 O -0.58 -7.33 14.72 -4.35 -0.06 -7.40 16 16 C -0.05 -0.32 6.88 40.35 0.28 -0.04 16 17 C -0.10 -0.25 10.34 22.58 0.23 -0.01 16 18 C -0.18 -0.84 6.53 22.03 0.14 -0.69 16 19 Br -0.01 -0.02 33.06 -20.37 -0.67 -0.70 16 20 C 0.08 0.41 5.12 41.34 0.21 0.62 16 21 C -0.06 0.05 2.78 71.24 0.20 0.25 16 22 O -0.56 1.57 11.20 -148.98 -1.67 -0.10 16 23 Si 0.78 -1.90 31.57 68.60 2.17 0.27 16 24 N -0.40 -2.79 3.13 -519.62 -1.63 -4.42 16 25 C 0.06 0.32 8.80 127.77 1.12 1.44 16 26 C -0.11 0.86 5.07 30.58 0.16 1.01 16 27 C -0.10 0.58 5.13 30.58 0.16 0.74 16 28 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 29 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 30 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 31 H 0.07 0.13 8.13 -2.39 -0.02 0.12 16 32 H 0.07 0.12 8.13 -2.39 -0.02 0.10 16 33 H 0.06 0.02 8.10 -2.38 -0.02 0.01 16 34 H 0.06 0.02 8.10 -2.39 -0.02 0.00 16 35 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 36 H 0.08 -0.41 8.14 -2.38 -0.02 -0.43 16 37 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 38 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.42 -2.89 6.55 -92.71 -0.61 -3.49 16 40 H 0.18 -0.84 7.45 -2.91 -0.02 -0.86 16 41 H 0.11 -0.35 6.97 -2.39 -0.02 -0.37 16 42 H 0.41 -5.64 8.74 -74.06 -0.65 -6.29 16 43 H -0.28 -0.69 6.05 99.48 0.60 -0.09 16 44 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 45 H 0.07 0.40 7.52 -2.38 -0.02 0.38 16 46 H 0.11 0.26 5.91 -2.39 -0.01 0.25 16 47 H 0.10 0.75 6.40 -2.38 -0.02 0.73 16 48 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 49 H 0.08 -0.76 7.18 -2.38 -0.02 -0.77 16 50 H 0.07 -0.32 8.14 -2.38 -0.02 -0.34 16 51 H 0.08 -0.46 8.11 -2.39 -0.02 -0.48 16 Total: 0.00 -24.14 426.60 0.69 -23.44 By element: Atomic # 1 Polarization: -15.73 SS G_CDS: -0.36 Total: -16.09 kcal Atomic # 6 Polarization: 8.22 SS G_CDS: 5.56 Total: 13.78 kcal Atomic # 7 Polarization: -1.65 SS G_CDS: -4.09 Total: -5.73 kcal Atomic # 8 Polarization: -13.06 SS G_CDS: -1.91 Total: -14.97 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: 2.17 Total: 0.27 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -0.67 Total: -0.70 kcal Total: -24.14 0.69 -23.44 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_5000100.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.636 kcal (2) G-P(sol) polarization free energy of solvation -24.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.445 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.081 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds