Wall clock time and date at job start Sun Mar 7 2021 07:17:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45205 * 109.47038 * 2 1 4 4 C 1.34225 * 116.99943 * 179.97438 * 3 2 1 5 5 O 1.20825 * 120.00047 * 0.02562 * 4 3 2 6 6 C 1.50698 * 119.99990 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.47304 * 299.99904 * 6 4 3 8 8 C 1.52999 * 109.46824 * 60.00712 * 6 4 3 9 9 C 1.52997 * 109.46991 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47131 * 299.99311 * 9 8 6 11 11 H 1.08996 * 109.47452 * 300.00000 * 10 9 8 12 12 C 1.52997 * 109.47131 * 179.97438 * 10 9 8 13 13 N 1.46500 * 109.47170 * 65.00316 * 12 10 9 14 14 C 1.34777 * 120.00168 * 179.97438 * 13 12 10 15 15 O 1.21278 * 119.99916 * 0.02562 * 14 13 12 16 16 C 1.50698 * 119.99931 * 179.97438 * 14 13 12 17 17 O 1.42903 * 109.47067 * 179.97438 * 16 14 13 18 18 C 1.35921 * 117.00198 * 179.97438 * 17 16 14 19 19 C 1.38786 * 120.06029 * 179.72292 * 18 17 16 20 20 Br 1.89098 * 120.03574 * 0.02843 * 19 18 17 21 21 C 1.38233 * 119.92677 * 179.81805 * 19 18 17 22 22 C 1.38243 * 120.04927 * 0.44143 * 21 19 18 23 23 C 1.50703 * 119.94472 * 179.76645 * 22 21 19 24 24 O 1.42900 * 109.46845 * 245.02408 * 23 22 21 25 25 Si 1.86298 * 109.46997 * 5.02729 * 23 22 21 26 26 C 1.38286 * 120.11283 * 359.79403 * 22 21 19 27 27 C 1.38142 * 120.07345 * 359.97438 * 26 22 21 28 28 C 1.53002 * 109.46972 * 60.00459 * 10 9 8 29 29 C 1.52997 * 109.46817 * 299.99733 * 28 10 9 30 30 H 1.08998 * 109.47413 * 299.99806 * 1 2 3 31 31 H 1.08996 * 109.47599 * 59.99878 * 1 2 3 32 32 H 1.08999 * 109.47398 * 179.97438 * 1 2 3 33 33 H 1.09004 * 109.46731 * 240.00228 * 2 1 3 34 34 H 1.08993 * 109.47109 * 120.00089 * 2 1 3 35 35 H 1.09002 * 109.46719 * 299.99679 * 8 6 4 36 36 H 1.08993 * 109.47839 * 59.99520 * 8 6 4 37 37 H 1.09001 * 109.47289 * 179.97438 * 9 8 6 38 38 H 1.09000 * 109.47611 * 59.99933 * 9 8 6 39 39 H 1.09000 * 109.47325 * 185.00280 * 12 10 9 40 40 H 1.09006 * 109.47500 * 305.00368 * 12 10 9 41 41 H 0.97004 * 120.00188 * 359.97438 * 13 12 10 42 42 H 1.09000 * 109.47697 * 299.99813 * 16 14 13 43 43 H 1.09002 * 109.47475 * 60.00444 * 16 14 13 44 44 H 1.08003 * 119.97706 * 180.23450 * 21 19 18 45 45 H 1.09000 * 109.46554 * 125.02351 * 23 22 21 46 46 H 0.96696 * 113.99901 * 60.00373 * 24 23 22 47 47 H 1.48496 * 110.00076 * 58.67764 * 25 23 22 48 48 H 1.48493 * 109.99820 * 180.02562 * 25 23 22 49 49 H 1.07995 * 119.95948 * 179.97438 * 26 22 21 50 50 H 1.07995 * 120.02099 * 179.97438 * 27 26 22 51 51 H 1.09002 * 109.47070 * 179.97438 * 28 10 9 52 52 H 1.08996 * 109.47407 * 59.99513 * 28 10 9 53 53 H 1.09001 * 109.47502 * 300.00518 * 29 28 10 54 54 H 1.09001 * 109.47289 * 180.02562 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0000 7 1 3.5852 3.4691 -0.8904 8 6 3.4486 3.6850 1.2487 9 6 4.0339 5.0986 1.2485 10 6 5.5617 5.0180 1.2496 11 1 5.8969 4.4862 2.1400 12 6 6.1470 6.4316 1.2487 13 7 5.7937 7.1072 2.4997 14 6 6.2047 8.3713 2.7224 15 8 6.8666 8.9497 1.8868 16 6 5.8407 9.0664 4.0090 17 8 6.3885 10.3863 4.0088 18 6 6.1502 11.1534 5.1052 19 6 6.6573 12.4435 5.1745 20 35 7.6801 13.1367 3.7430 21 6 6.4101 13.2227 6.2893 22 6 5.6665 12.7145 7.3380 23 6 5.4029 13.5641 8.5545 24 8 6.0448 12.9815 9.6905 25 14 6.0756 15.2783 8.2722 26 6 5.1645 11.4276 7.2730 27 6 5.4045 10.6464 6.1592 28 6 6.0339 4.2705 0.0009 29 6 5.4486 2.8568 0.0011 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0276 -0.0005 33 1 1.8933 -0.5138 -0.8901 34 1 1.8933 -0.5138 0.8899 35 1 2.3601 3.7420 1.2481 36 1 3.7841 3.1534 2.1391 37 1 3.6972 5.6314 2.1378 38 1 3.6987 5.6306 0.3581 39 1 7.2319 6.3757 1.1599 40 1 5.7419 6.9922 0.4062 41 1 5.2639 6.6447 3.1679 42 1 4.7558 9.1230 4.0972 43 1 6.2451 8.5058 4.8518 44 1 6.8011 14.2280 6.3425 45 1 4.3290 13.6200 8.7328 46 1 7.0042 12.9005 9.6015 47 1 5.4390 15.8829 7.0745 48 1 5.8225 16.1260 9.4649 49 1 4.5842 11.0329 8.0939 50 1 5.0124 9.6413 6.1095 51 1 7.1224 4.2134 0.0014 52 1 5.6987 4.8023 -0.8895 53 1 5.7837 2.3249 0.8915 54 1 5.7853 2.3240 -0.8882 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_6201210.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:48 Heat of formation + Delta-G solvation = -170.941395 kcal Electronic energy + Delta-G solvation = -35688.703708 eV Core-core repulsion = 30638.395126 eV Total energy + Delta-G solvation = -5050.308582 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 456.107 amu Computer time = 1.95 seconds Orbital eigenvalues (eV) -41.84689 -41.64936 -40.72838 -39.57488 -38.98792 -37.73222 -37.20377 -35.93915 -33.51843 -33.19039 -32.38275 -32.07393 -31.73727 -30.50690 -29.67759 -27.31424 -26.26925 -24.68836 -23.95549 -23.74330 -23.16445 -22.40568 -21.66595 -21.54953 -20.70452 -19.53232 -18.73407 -18.55777 -18.10835 -17.69079 -17.57710 -17.50893 -17.23097 -16.65315 -16.49576 -16.25902 -15.93813 -15.74923 -15.58891 -15.25970 -15.16109 -14.96784 -14.77068 -14.72979 -14.64014 -14.28260 -14.08138 -13.98762 -13.78810 -13.64243 -13.49742 -13.41795 -13.23659 -12.99523 -12.89198 -12.56804 -12.40194 -12.27623 -12.23790 -12.15659 -12.09866 -11.87838 -11.85533 -11.84755 -11.58522 -11.44396 -11.22580 -11.18436 -11.11109 -10.94173 -10.44821 -10.15715 -9.98558 -9.30559 -5.02552 -0.02291 0.09535 0.65209 1.10273 1.29334 1.44255 1.49131 1.60518 1.64177 1.93897 2.40963 2.54368 3.42660 3.50118 3.51344 3.58394 3.60109 3.67355 3.80526 3.85241 3.87261 3.94989 3.98298 4.03127 4.04772 4.09056 4.10226 4.16357 4.27712 4.31525 4.35564 4.39789 4.46120 4.47153 4.51442 4.64439 4.66603 4.74281 4.79924 4.82167 4.85018 4.88097 4.98187 5.04536 5.09765 5.11530 5.12928 5.18375 5.23149 5.31189 5.31446 5.36338 5.44123 5.47500 5.52258 6.07026 6.47424 6.66139 6.77798 7.16515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.543 6.543 6 C -0.077 4.077 7 H 0.124 0.876 8 C -0.105 4.105 9 C -0.110 4.110 10 C -0.091 4.091 11 H 0.091 0.909 12 C 0.127 3.873 13 N -0.708 5.708 14 C 0.511 3.489 15 O -0.570 6.570 16 C 0.033 3.967 17 O -0.304 6.304 18 C 0.150 3.850 19 C -0.141 4.141 20 Br -0.049 7.049 21 C -0.054 4.054 22 C -0.152 4.152 23 C -0.052 4.052 24 O -0.550 6.550 25 Si 0.742 3.258 26 C -0.034 4.034 27 C -0.195 4.195 28 C -0.108 4.108 29 C -0.099 4.099 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.094 0.906 33 H 0.064 0.936 34 H 0.067 0.933 35 H 0.083 0.917 36 H 0.069 0.931 37 H 0.087 0.913 38 H 0.072 0.928 39 H 0.058 0.942 40 H 0.062 0.938 41 H 0.420 0.580 42 H 0.129 0.871 43 H 0.129 0.871 44 H 0.148 0.852 45 H 0.118 0.882 46 H 0.396 0.604 47 H -0.289 1.289 48 H -0.292 1.292 49 H 0.155 0.845 50 H 0.173 0.827 51 H 0.074 0.926 52 H 0.075 0.925 53 H 0.065 0.935 54 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.748 -3.950 4.237 7.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.433 6.433 6 C -0.096 4.096 7 H 0.141 0.859 8 C -0.142 4.142 9 C -0.147 4.147 10 C -0.110 4.110 11 H 0.109 0.891 12 C 0.004 3.996 13 N -0.363 5.363 14 C 0.297 3.703 15 O -0.448 6.448 16 C -0.045 4.045 17 O -0.216 6.216 18 C 0.102 3.898 19 C -0.221 4.221 20 Br 0.036 6.964 21 C -0.073 4.073 22 C -0.154 4.154 23 C -0.164 4.164 24 O -0.358 6.358 25 Si 0.649 3.351 26 C -0.052 4.052 27 C -0.214 4.214 28 C -0.146 4.146 29 C -0.137 4.137 30 H 0.090 0.910 31 H 0.087 0.913 32 H 0.113 0.887 33 H 0.083 0.917 34 H 0.085 0.915 35 H 0.101 0.899 36 H 0.088 0.912 37 H 0.106 0.894 38 H 0.091 0.909 39 H 0.077 0.923 40 H 0.080 0.920 41 H 0.258 0.742 42 H 0.147 0.853 43 H 0.147 0.853 44 H 0.165 0.835 45 H 0.136 0.864 46 H 0.246 0.754 47 H -0.216 1.216 48 H -0.220 1.220 49 H 0.173 0.827 50 H 0.191 0.809 51 H 0.093 0.907 52 H 0.094 0.906 53 H 0.083 0.917 54 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -4.378 -2.731 3.064 6.001 hybrid contribution -0.736 -1.059 0.155 1.299 sum -5.114 -3.790 3.219 7.133 Atomic orbital electron populations 1.21818 0.90652 1.04217 1.03785 1.23225 0.96935 0.79513 1.02309 1.86517 1.24381 1.33275 1.83486 1.24457 0.80479 0.93493 0.70903 1.90669 1.61173 1.44613 1.46871 1.21277 0.96555 0.88079 1.03704 0.85868 1.21503 1.01770 0.95909 0.95032 1.21616 0.93528 0.95578 1.03966 1.21383 0.96157 0.93415 1.00005 0.89110 1.21389 0.99852 0.92565 0.85804 1.45679 1.55728 1.13206 1.21651 1.20468 0.79420 0.82354 0.88104 1.90793 1.39828 1.66251 1.47913 1.22845 1.02230 0.82105 0.97298 1.86247 1.72139 1.25798 1.37465 1.18808 0.94286 0.89665 0.87057 1.21144 1.08175 0.95440 0.97317 1.96776 1.69767 1.85326 1.44521 1.20908 0.96362 0.98976 0.91037 1.20298 1.01564 0.97024 0.96496 1.24827 1.01500 1.05077 0.85003 1.86476 1.26790 1.84605 1.37975 0.94009 0.90557 0.74001 0.76560 1.21217 0.95038 0.92012 0.96956 1.21605 1.03041 1.03251 0.93473 1.21483 1.01089 0.93960 0.98082 1.21377 0.91598 0.97722 1.02989 0.91048 0.91315 0.88700 0.91737 0.91466 0.89866 0.91213 0.89424 0.90924 0.92341 0.91991 0.74181 0.85310 0.85311 0.83535 0.86419 0.75425 1.21569 1.21999 0.82708 0.80950 0.90717 0.90647 0.91671 0.91955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.66 10.29 71.98 0.74 1.41 16 2 C 0.05 0.02 6.19 71.98 0.45 0.46 16 3 O -0.36 -0.81 10.12 -51.37 -0.52 -1.33 16 4 C 0.46 1.51 7.25 71.24 0.52 2.02 16 5 O -0.54 -5.53 15.73 21.97 0.35 -5.18 16 6 C -0.08 0.29 2.63 -11.54 -0.03 0.26 16 7 H 0.12 -0.77 8.14 -2.39 -0.02 -0.79 16 8 C -0.10 0.81 5.13 30.59 0.16 0.97 16 9 C -0.11 1.15 5.08 30.59 0.16 1.31 16 10 C -0.09 0.82 2.23 -10.79 -0.02 0.80 16 11 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 12 C 0.13 -0.63 5.06 86.38 0.44 -0.19 16 13 N -0.71 5.00 5.28 -463.06 -2.45 2.55 16 14 C 0.51 0.21 7.91 87.66 0.69 0.90 16 15 O -0.57 -7.28 16.50 16.01 0.26 -7.02 16 16 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 17 O -0.30 -1.16 9.01 -73.62 -0.66 -1.82 16 18 C 0.15 0.22 6.68 22.52 0.15 0.37 16 19 C -0.14 -0.55 6.24 22.40 0.14 -0.41 16 20 Br -0.05 -0.37 33.16 -20.37 -0.68 -1.05 16 21 C -0.05 -0.01 8.40 22.27 0.19 0.18 16 22 C -0.15 0.38 5.35 -19.85 -0.11 0.27 16 23 C -0.05 0.17 2.80 71.24 0.20 0.37 16 24 O -0.55 1.65 12.83 -148.98 -1.91 -0.26 16 25 Si 0.74 -1.43 29.80 68.60 2.04 0.62 16 26 C -0.03 0.16 9.68 22.26 0.22 0.37 16 27 C -0.19 0.99 9.04 22.36 0.20 1.20 16 28 C -0.11 0.71 5.20 30.59 0.16 0.87 16 29 C -0.10 0.31 4.49 30.60 0.14 0.44 16 30 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 33 H 0.06 0.08 8.13 -2.39 -0.02 0.06 16 34 H 0.07 0.05 8.13 -2.39 -0.02 0.03 16 35 H 0.08 -0.65 8.11 -2.39 -0.02 -0.67 16 36 H 0.07 -0.51 8.14 -2.39 -0.02 -0.53 16 37 H 0.09 -1.20 7.18 -2.39 -0.02 -1.21 16 38 H 0.07 -0.70 8.14 -2.39 -0.02 -0.72 16 39 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 40 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 41 H 0.42 -6.14 7.65 -92.71 -0.71 -6.85 16 42 H 0.13 -1.62 7.66 -2.39 -0.02 -1.63 16 43 H 0.13 -1.60 7.66 -2.39 -0.02 -1.62 16 44 H 0.15 -0.31 4.90 -2.91 -0.01 -0.32 16 45 H 0.12 -0.39 7.96 -2.39 -0.02 -0.41 16 46 H 0.40 -4.06 8.70 -74.06 -0.64 -4.71 16 47 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 48 H -0.29 -1.50 7.11 99.48 0.71 -0.79 16 49 H 0.16 -1.26 8.06 -2.91 -0.02 -1.29 16 50 H 0.17 -2.18 6.30 -2.91 -0.02 -2.20 16 51 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 52 H 0.07 -0.52 8.14 -2.39 -0.02 -0.54 16 53 H 0.06 -0.07 8.10 -2.39 -0.02 -0.09 16 54 H 0.06 -0.01 8.10 -2.39 -0.02 -0.03 16 Total: 0.00 -30.28 457.73 0.80 -29.47 By element: Atomic # 1 Polarization: -27.38 SS G_CDS: -0.38 Total: -27.76 kcal Atomic # 6 Polarization: 7.03 SS G_CDS: 4.75 Total: 11.78 kcal Atomic # 7 Polarization: 5.00 SS G_CDS: -2.45 Total: 2.55 kcal Atomic # 8 Polarization: -13.13 SS G_CDS: -2.49 Total: -15.62 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: 2.04 Total: 0.62 kcal Atomic # 35 Polarization: -0.37 SS G_CDS: -0.68 Total: -1.05 kcal Total: -30.28 0.80 -29.47 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_6201210.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.471 kcal (2) G-P(sol) polarization free energy of solvation -30.275 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -171.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.95 seconds