Wall clock time and date at job start Sun Mar 7 2021 07:17:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.46837 * 2 1 4 4 C 1.34229 * 116.99579 * 179.97438 * 3 2 1 5 5 O 1.20819 * 120.00199 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99505 * 179.97438 * 4 3 2 7 7 H 1.08992 * 109.47518 * 300.00344 * 6 4 3 8 8 C 1.53002 * 109.46783 * 60.00307 * 6 4 3 9 9 C 1.52997 * 109.46817 * 179.97438 * 8 6 4 10 10 C 1.53005 * 109.47452 * 300.00239 * 9 8 6 11 11 H 1.09002 * 109.46935 * 300.00125 * 10 9 8 12 12 C 1.53002 * 109.47197 * 180.02562 * 10 9 8 13 13 N 1.46504 * 109.46806 * 175.00000 * 12 10 9 14 14 C 1.34774 * 119.99323 * 179.97438 * 13 12 10 15 15 O 1.21687 * 120.00532 * 359.97438 * 14 13 12 16 16 C 1.46688 * 119.99411 * 180.02562 * 14 13 12 17 17 C 1.37873 * 126.23023 * 179.69252 * 16 14 13 18 18 C 1.39838 * 107.08134 * 179.84451 * 17 16 14 19 19 C 1.35450 * 107.86550 * 0.41265 * 18 17 16 20 20 C 1.50702 * 125.56304 * 179.70184 * 19 18 17 21 21 O 1.42894 * 109.47272 * 245.04380 * 20 19 18 22 22 Si 1.86297 * 109.46967 * 5.04729 * 20 19 18 23 23 N 1.35529 * 108.87318 * 359.74267 * 19 18 17 24 24 C 1.52999 * 109.47159 * 59.99536 * 10 9 8 25 25 C 1.52997 * 109.47317 * 300.00546 * 24 10 9 26 26 H 1.08993 * 109.46973 * 59.99936 * 1 2 3 27 27 H 1.08998 * 109.46790 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47218 * 300.00037 * 1 2 3 29 29 H 1.09000 * 109.47218 * 239.99963 * 2 1 3 30 30 H 1.09003 * 109.46958 * 120.00063 * 2 1 3 31 31 H 1.08993 * 109.47662 * 299.99813 * 8 6 4 32 32 H 1.09002 * 109.47075 * 60.00319 * 8 6 4 33 33 H 1.09002 * 109.47153 * 60.00231 * 9 8 6 34 34 H 1.09001 * 109.47289 * 180.02562 * 9 8 6 35 35 H 1.09000 * 109.46791 * 294.99945 * 12 10 9 36 36 H 1.08998 * 109.47254 * 54.99840 * 12 10 9 37 37 H 0.96997 * 119.99996 * 359.97438 * 13 12 10 38 38 H 1.07998 * 126.45658 * 359.95587 * 17 16 14 39 39 H 1.08003 * 126.06674 * 180.17710 * 18 17 16 40 40 H 1.09001 * 109.46712 * 125.04670 * 20 19 18 41 41 H 0.96697 * 114.00225 * 60.00523 * 21 20 19 42 42 H 1.48500 * 110.00371 * 58.68103 * 22 20 19 43 43 H 1.48506 * 109.99975 * 179.97438 * 22 20 19 44 44 H 0.97000 * 125.68214 * 179.97438 * 23 19 18 45 45 H 1.08996 * 109.46929 * 179.97438 * 24 10 9 46 46 H 1.09002 * 109.46716 * 60.00455 * 24 10 9 47 47 H 1.09002 * 109.47153 * 299.99641 * 25 24 10 48 48 H 1.09001 * 109.46832 * 179.97438 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5851 3.4692 -0.8904 8 6 3.4485 3.6851 1.2486 9 6 4.0337 5.0987 1.2484 10 6 5.5616 5.0183 1.2494 11 1 5.8969 4.4864 2.1398 12 6 6.1468 6.4320 1.2498 13 7 7.6049 6.3569 1.3711 14 6 8.3383 7.4874 1.3926 15 8 7.7895 8.5704 1.3107 16 6 9.7982 7.4121 1.5135 17 6 10.6696 8.4802 1.5422 18 6 11.9592 7.9549 1.6705 19 6 11.8561 6.6048 1.7077 20 6 13.0078 5.6410 1.8327 21 8 13.1060 4.8588 0.6409 22 14 14.5896 6.5927 2.0830 23 7 10.5482 6.2622 1.6131 24 6 6.0338 4.2706 0.0008 25 6 5.4485 2.8570 0.0010 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8900 31 1 2.3600 3.7421 1.2482 32 1 3.7841 3.1535 2.1391 33 1 3.6984 5.6306 0.3580 34 1 3.6977 5.6312 2.1382 35 1 5.8850 6.9338 0.3183 36 1 5.7406 6.9931 2.0913 37 1 8.0423 5.4936 1.4360 38 1 10.4057 9.5256 1.4794 39 1 12.8752 8.5244 1.7260 40 1 12.8404 4.9836 2.6859 41 1 13.2555 5.3795 -0.1601 42 1 14.4885 7.4345 3.3022 43 1 15.7331 5.6535 2.2084 44 1 10.1988 5.3573 1.6149 45 1 7.1222 4.2137 0.0013 46 1 5.6985 4.8025 -0.8896 47 1 5.7838 2.3251 0.8915 48 1 5.7846 2.3245 -0.8887 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14654746_6580494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:17:58 Heat of formation + Delta-G solvation = -130.296161 kcal Electronic energy + Delta-G solvation = -28868.739468 eV Core-core repulsion = 24697.031439 eV Total energy + Delta-G solvation = -4171.708029 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.51847 -41.85535 -40.54241 -39.41057 -37.76485 -37.65965 -36.05445 -33.26249 -32.51612 -32.03500 -31.77218 -31.26253 -28.07800 -26.44944 -24.74381 -23.88829 -23.40904 -22.76517 -21.75358 -21.49004 -21.13991 -20.78168 -19.81349 -18.76350 -18.10637 -17.70600 -17.59785 -17.07001 -16.77315 -16.45062 -16.15303 -15.82260 -15.32795 -15.24428 -15.15393 -15.10298 -14.74631 -14.69964 -14.48781 -14.32592 -13.96640 -13.91545 -13.71691 -13.64458 -13.53980 -13.26013 -13.09788 -12.95407 -12.56669 -12.26331 -12.21064 -12.15328 -12.06912 -11.89742 -11.60947 -11.49579 -11.45266 -11.17628 -11.13026 -10.65418 -10.29739 -10.06793 -9.27186 -4.90885 0.30303 1.07349 1.23698 1.55036 1.61727 1.73163 1.91411 2.02494 2.22440 2.28200 3.37924 3.48102 3.56561 3.60088 3.60907 3.75530 3.84360 3.92620 3.97945 4.00922 4.07524 4.23773 4.26381 4.28688 4.31834 4.35103 4.40896 4.45543 4.46440 4.64011 4.69344 4.79612 4.81117 4.86301 4.89700 4.96725 5.03615 5.06467 5.10046 5.12675 5.14663 5.17996 5.24277 5.30459 5.41144 5.46158 5.59630 5.80337 6.26688 6.44444 6.63288 6.68695 7.02804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.054 3.946 3 O -0.360 6.360 4 C 0.462 3.538 5 O -0.542 6.542 6 C -0.077 4.077 7 H 0.126 0.874 8 C -0.104 4.104 9 C -0.107 4.107 10 C -0.093 4.093 11 H 0.085 0.915 12 C 0.126 3.874 13 N -0.717 5.717 14 C 0.587 3.413 15 O -0.571 6.571 16 C -0.066 4.066 17 C -0.117 4.117 18 C -0.204 4.204 19 C 0.027 3.973 20 C -0.055 4.055 21 O -0.555 6.555 22 Si 0.805 3.195 23 N -0.513 5.513 24 C -0.109 4.109 25 C -0.100 4.100 26 H 0.069 0.931 27 H 0.095 0.905 28 H 0.069 0.931 29 H 0.066 0.934 30 H 0.066 0.934 31 H 0.084 0.916 32 H 0.065 0.935 33 H 0.080 0.920 34 H 0.080 0.920 35 H 0.068 0.932 36 H 0.065 0.935 37 H 0.407 0.593 38 H 0.147 0.853 39 H 0.171 0.829 40 H 0.115 0.885 41 H 0.399 0.601 42 H -0.286 1.286 43 H -0.296 1.296 44 H 0.426 0.574 45 H 0.074 0.926 46 H 0.075 0.925 47 H 0.064 0.936 48 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.446 -1.071 -1.362 1.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.020 4.020 3 O -0.277 6.277 4 C 0.307 3.693 5 O -0.432 6.432 6 C -0.096 4.096 7 H 0.144 0.856 8 C -0.141 4.141 9 C -0.145 4.145 10 C -0.111 4.111 11 H 0.103 0.897 12 C 0.003 3.997 13 N -0.368 5.368 14 C 0.376 3.624 15 O -0.450 6.450 16 C -0.179 4.179 17 C -0.144 4.144 18 C -0.228 4.228 19 C -0.092 4.092 20 C -0.165 4.165 21 O -0.363 6.363 22 Si 0.709 3.291 23 N -0.111 5.111 24 C -0.146 4.146 25 C -0.137 4.137 26 H 0.088 0.912 27 H 0.114 0.886 28 H 0.088 0.912 29 H 0.084 0.916 30 H 0.084 0.916 31 H 0.102 0.898 32 H 0.083 0.917 33 H 0.098 0.902 34 H 0.099 0.901 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.243 0.757 38 H 0.164 0.836 39 H 0.188 0.812 40 H 0.132 0.868 41 H 0.250 0.750 42 H -0.213 1.213 43 H -0.224 1.224 44 H 0.266 0.734 45 H 0.093 0.907 46 H 0.094 0.906 47 H 0.083 0.917 48 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -0.236 -1.124 -0.498 1.251 hybrid contribution -0.578 -1.491 0.325 1.632 sum -0.814 -2.614 -0.173 2.744 Atomic orbital electron populations 1.21822 0.90649 1.04243 1.03778 1.23235 0.96956 0.79475 1.02328 1.86521 1.24389 1.33327 1.83465 1.24429 0.80499 0.93457 0.70914 1.90662 1.61146 1.44559 1.46870 1.21270 0.96698 0.88104 1.03495 0.85612 1.21480 1.01836 0.95722 0.95111 1.21484 0.93017 0.95864 1.04088 1.21405 0.96497 0.93687 0.99554 0.89690 1.21476 0.78183 0.97784 1.02302 1.45811 1.08319 1.08222 1.74468 1.17220 0.85015 0.84255 0.75942 1.90846 1.72474 1.29473 1.52236 1.20357 0.90860 0.87446 1.19271 1.21502 0.92185 0.98428 1.02314 1.20960 0.98518 0.92528 1.10765 1.21355 0.85054 0.95649 1.07132 1.25040 1.02842 0.97319 0.91267 1.86477 1.95255 1.36988 1.17535 0.92981 0.71759 0.78748 0.85641 1.41906 1.05884 1.08208 1.55080 1.21593 1.00820 0.94026 0.98181 1.21393 0.91548 0.97785 1.03017 0.91224 0.88635 0.91177 0.91577 0.91551 0.89774 0.91656 0.90151 0.90100 0.91414 0.91656 0.75657 0.83564 0.81218 0.86755 0.75033 1.21309 1.22357 0.73418 0.90722 0.90644 0.91723 0.91706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.54 10.29 71.98 0.74 1.29 16 2 C 0.05 0.06 6.19 71.98 0.45 0.50 16 3 O -0.36 -1.16 10.12 -51.40 -0.52 -1.68 16 4 C 0.46 1.86 7.25 71.24 0.52 2.38 16 5 O -0.54 -5.74 15.73 21.99 0.35 -5.39 16 6 C -0.08 0.22 2.63 -11.54 -0.03 0.19 16 7 H 0.13 -0.72 8.14 -2.39 -0.02 -0.74 16 8 C -0.10 0.55 5.14 30.59 0.16 0.71 16 9 C -0.11 0.78 5.20 30.60 0.16 0.94 16 10 C -0.09 0.65 2.22 -10.79 -0.02 0.63 16 11 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 12 C 0.13 -0.36 5.07 86.38 0.44 0.08 16 13 N -0.72 1.46 5.28 -467.07 -2.47 -1.00 16 14 C 0.59 3.20 7.79 86.45 0.67 3.87 16 15 O -0.57 -8.01 16.88 -4.31 -0.07 -8.09 16 16 C -0.07 -0.20 7.06 40.35 0.28 0.09 16 17 C -0.12 -0.43 10.65 22.57 0.24 -0.19 16 18 C -0.20 0.19 9.32 22.01 0.21 0.40 16 19 C 0.03 -0.06 6.46 41.34 0.27 0.20 16 20 C -0.05 0.25 3.08 71.24 0.22 0.47 16 21 O -0.55 2.33 12.88 -148.98 -1.92 0.41 16 22 Si 0.80 -4.10 30.56 68.60 2.10 -2.00 16 23 N -0.51 1.27 5.99 -171.92 -1.03 0.24 16 24 C -0.11 0.74 5.08 30.59 0.16 0.89 16 25 C -0.10 0.31 4.49 30.59 0.14 0.45 16 26 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 27 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 28 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 30 H 0.07 0.11 8.13 -2.39 -0.02 0.09 16 31 H 0.08 -0.45 8.11 -2.39 -0.02 -0.46 16 32 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 33 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 34 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 35 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 36 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.41 -3.04 6.78 -92.71 -0.63 -3.67 16 38 H 0.15 0.62 8.06 -2.91 -0.02 0.59 16 39 H 0.17 -0.97 6.19 -2.91 -0.02 -0.99 16 40 H 0.12 -0.50 7.96 -2.39 -0.02 -0.52 16 41 H 0.40 -4.55 8.70 -74.06 -0.64 -5.19 16 42 H -0.29 -0.19 7.11 99.48 0.71 0.52 16 43 H -0.30 -0.63 7.11 99.48 0.71 0.08 16 44 H 0.43 -3.15 8.19 -92.71 -0.76 -3.91 16 45 H 0.07 -0.60 7.18 -2.39 -0.02 -0.61 16 46 H 0.07 -0.51 8.14 -2.39 -0.02 -0.53 16 47 H 0.06 -0.07 8.10 -2.39 -0.02 -0.09 16 48 H 0.06 -0.04 8.10 -2.39 -0.02 -0.06 16 Total: 0.00 -23.62 392.78 0.01 -23.61 By element: Atomic # 1 Polarization: -17.98 SS G_CDS: -1.01 Total: -18.99 kcal Atomic # 6 Polarization: 8.30 SS G_CDS: 4.59 Total: 12.88 kcal Atomic # 7 Polarization: 2.74 SS G_CDS: -3.50 Total: -0.76 kcal Atomic # 8 Polarization: -12.58 SS G_CDS: -2.17 Total: -14.74 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.10 Total: -2.00 kcal Total: -23.62 0.01 -23.61 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_6580494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.688 kcal (2) G-P(sol) polarization free energy of solvation -23.620 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds