Wall clock time and date at job start Sun Mar 7 2021 07:18:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45203 * 109.46837 * 2 1 4 4 C 1.34229 * 116.99579 * 179.97438 * 3 2 1 5 5 O 1.20819 * 120.00199 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99505 * 179.97438 * 4 3 2 7 7 H 1.08992 * 109.47518 * 300.00344 * 6 4 3 8 8 C 1.53002 * 109.46783 * 60.00307 * 6 4 3 9 9 C 1.52997 * 109.46817 * 179.97438 * 8 6 4 10 10 C 1.53005 * 109.47452 * 300.00239 * 9 8 6 11 11 H 1.09002 * 109.46935 * 300.00125 * 10 9 8 12 12 C 1.53002 * 109.47197 * 180.02562 * 10 9 8 13 13 N 1.46504 * 109.46806 * 175.00000 * 12 10 9 14 14 C 1.34774 * 119.99323 * 179.97438 * 13 12 10 15 15 O 1.21695 * 120.00508 * 359.97438 * 14 13 12 16 16 C 1.46589 * 119.99412 * 179.97438 * 14 13 12 17 17 C 1.36645 * 125.45653 * 179.97438 * 16 14 13 18 18 C 1.37474 * 113.29999 * 180.02562 * 17 16 14 19 19 C 1.50692 * 122.45330 * 180.02562 * 18 17 16 20 20 C 1.33821 * 115.09708 * 0.02562 * 18 17 16 21 21 C 1.50705 * 124.52138 * 180.02562 * 20 18 17 22 22 O 1.42894 * 109.46960 * 29.99997 * 21 20 18 23 23 Si 1.86293 * 109.46983 * 150.00101 * 21 20 18 24 24 S 1.70619 * 110.95535 * 359.72294 * 20 18 17 25 25 C 1.52999 * 109.47159 * 59.99536 * 10 9 8 26 26 C 1.52997 * 109.47317 * 300.00546 * 25 10 9 27 27 H 1.08993 * 109.46973 * 59.99936 * 1 2 3 28 28 H 1.08998 * 109.46790 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47218 * 300.00037 * 1 2 3 30 30 H 1.09000 * 109.47218 * 239.99963 * 2 1 3 31 31 H 1.09003 * 109.46958 * 120.00063 * 2 1 3 32 32 H 1.08993 * 109.47662 * 299.99813 * 8 6 4 33 33 H 1.09002 * 109.47075 * 60.00319 * 8 6 4 34 34 H 1.09002 * 109.47153 * 60.00231 * 9 8 6 35 35 H 1.09001 * 109.47289 * 180.02562 * 9 8 6 36 36 H 1.09000 * 109.46791 * 294.99945 * 12 10 9 37 37 H 1.08998 * 109.47254 * 54.99840 * 12 10 9 38 38 H 0.96997 * 119.99996 * 359.97438 * 13 12 10 39 39 H 1.08000 * 123.35648 * 359.97438 * 17 16 14 40 40 H 1.08997 * 109.47277 * 89.98036 * 19 18 17 41 41 H 1.09002 * 109.47380 * 209.97913 * 19 18 17 42 42 H 1.08997 * 109.47423 * 329.97925 * 19 18 17 43 43 H 1.08997 * 109.47089 * 270.00062 * 21 20 18 44 44 H 0.96708 * 113.99936 * 60.00328 * 22 21 20 45 45 H 1.48503 * 110.00074 * 180.02562 * 23 21 20 46 46 H 1.48496 * 110.00216 * 301.31827 * 23 21 20 47 47 H 1.08996 * 109.46929 * 179.97438 * 25 10 9 48 48 H 1.09002 * 109.46716 * 60.00455 * 25 10 9 49 49 H 1.09002 * 109.47153 * 299.99641 * 26 25 10 50 50 H 1.09001 * 109.46832 * 179.97438 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9207 2.9375 0.0000 7 1 3.5851 3.4692 -0.8904 8 6 3.4485 3.6851 1.2486 9 6 4.0337 5.0987 1.2484 10 6 5.5616 5.0183 1.2494 11 1 5.8969 4.4864 2.1398 12 6 6.1468 6.4320 1.2498 13 7 7.6049 6.3569 1.3711 14 6 8.3383 7.4874 1.3926 15 8 7.7895 8.5704 1.3107 16 6 9.7971 7.4122 1.5145 17 6 10.6460 8.4825 1.5469 18 6 11.9679 8.1247 1.6669 19 6 13.0789 9.1412 1.7231 20 6 12.1959 6.8076 1.7301 21 6 13.5608 6.1825 1.8631 22 8 14.4226 7.0685 2.5802 23 14 13.4184 4.5714 2.7875 24 16 10.7346 5.9307 1.6483 25 6 6.0338 4.2706 0.0008 26 6 5.4485 2.8570 0.0010 27 1 -0.3633 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 1.8934 -0.5139 0.8900 32 1 2.3600 3.7421 1.2482 33 1 3.7841 3.1535 2.1391 34 1 3.6984 5.6306 0.3580 35 1 3.6977 5.6312 2.1382 36 1 5.8850 6.9338 0.3183 37 1 5.7406 6.9931 2.0913 38 1 8.0423 5.4936 1.4360 39 1 10.3119 9.5076 1.4838 40 1 13.2631 9.4213 2.7603 41 1 13.9856 8.7126 1.2961 42 1 12.7919 10.0252 1.1536 43 1 13.9738 5.9972 0.8716 44 1 14.1164 7.2780 3.4732 45 1 14.7578 3.9451 2.9260 46 1 12.8270 4.8061 4.1292 47 1 7.1222 4.2137 0.0013 48 1 5.6985 4.8025 -0.8896 49 1 5.7838 2.3251 0.8915 50 1 5.7846 2.3245 -0.8887 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_6739946.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:18:08 Heat of formation + Delta-G solvation = -145.856021 kcal Electronic energy + Delta-G solvation = -30560.922373 eV Core-core repulsion = 26259.354016 eV Total energy + Delta-G solvation = -4301.568357 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.154 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.75363 -40.92415 -40.03114 -39.39706 -37.62087 -37.44626 -35.90346 -33.23128 -32.54934 -31.99913 -31.78461 -30.27895 -28.12582 -26.12199 -24.82311 -24.33915 -23.72221 -23.13710 -21.79076 -21.57478 -20.88344 -20.20666 -19.37291 -18.63721 -17.90301 -17.58798 -17.57077 -17.26641 -16.89915 -16.60607 -16.44035 -15.88634 -15.83413 -15.37249 -15.23732 -15.16912 -14.70214 -14.68619 -14.54354 -14.41134 -14.01530 -13.91830 -13.78611 -13.57977 -13.53799 -13.36353 -13.20648 -13.11736 -12.97698 -12.89968 -12.57557 -12.40623 -12.30460 -12.27703 -12.26094 -11.92601 -11.85753 -11.62030 -11.49400 -11.32169 -11.16717 -11.05515 -10.92172 -10.19162 -9.68069 -9.42389 -5.22926 -0.61757 0.29156 0.70275 1.03159 1.22963 1.33743 1.46449 1.66197 1.80257 2.04449 2.20733 3.10148 3.34305 3.46037 3.49199 3.50592 3.69592 3.80113 3.88353 3.95013 3.96139 4.00261 4.10473 4.15785 4.22902 4.26033 4.27685 4.29546 4.34497 4.42338 4.54347 4.56301 4.60202 4.66337 4.73099 4.76583 4.79191 4.80654 4.86360 4.93288 4.95036 4.99644 5.02372 5.02893 5.04912 5.14479 5.25579 5.34881 5.37537 5.43324 5.49994 6.16982 6.35673 6.78082 7.11434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.110 4.110 9 C -0.110 4.110 10 C -0.104 4.104 11 H 0.082 0.918 12 C 0.124 3.876 13 N -0.727 5.727 14 C 0.592 3.408 15 O -0.525 6.525 16 C -0.262 4.262 17 C -0.048 4.048 18 C -0.095 4.095 19 C -0.096 4.096 20 C -0.236 4.236 21 C -0.032 4.032 22 O -0.517 6.517 23 Si 0.662 3.338 24 S 0.200 5.800 25 C -0.116 4.116 26 C -0.104 4.104 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.081 0.919 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.075 0.925 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.399 0.601 39 H 0.155 0.845 40 H 0.069 0.931 41 H 0.084 0.916 42 H 0.063 0.937 43 H 0.129 0.871 44 H 0.378 0.622 45 H -0.238 1.238 46 H -0.247 1.247 47 H 0.070 0.930 48 H 0.071 0.929 49 H 0.074 0.926 50 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.860 -2.929 -0.091 3.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.147 4.147 9 C -0.148 4.148 10 C -0.123 4.123 11 H 0.100 0.900 12 C 0.001 3.999 13 N -0.379 5.379 14 C 0.378 3.622 15 O -0.403 6.403 16 C -0.381 4.381 17 C -0.081 4.081 18 C -0.108 4.108 19 C -0.154 4.154 20 C -0.355 4.355 21 C -0.144 4.144 22 O -0.324 6.324 23 Si 0.560 3.440 24 S 0.469 5.531 25 C -0.153 4.153 26 C -0.142 4.142 27 H 0.086 0.914 28 H 0.100 0.900 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.099 0.901 33 H 0.088 0.912 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.233 0.767 39 H 0.172 0.828 40 H 0.088 0.912 41 H 0.103 0.897 42 H 0.082 0.918 43 H 0.147 0.853 44 H 0.227 0.773 45 H -0.161 1.161 46 H -0.170 1.170 47 H 0.088 0.912 48 H 0.090 0.910 49 H 0.093 0.907 50 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.888 -4.540 0.050 4.917 hybrid contribution 0.781 1.783 0.628 2.046 sum -1.106 -2.757 0.678 3.047 Atomic orbital electron populations 1.21820 0.92354 1.03244 1.03646 1.23072 0.95583 0.79938 1.02691 1.86509 1.24503 1.32655 1.83790 1.23807 0.80641 0.92716 0.72156 1.90681 1.60465 1.43198 1.45041 1.21159 0.96839 0.89644 1.02238 0.87165 1.21519 1.01633 0.95558 0.96019 1.21496 0.93422 0.96423 1.03416 1.21503 0.96329 0.94893 0.99564 0.89988 1.21476 0.78479 0.96994 1.02943 1.45867 1.08046 1.08360 1.75603 1.16924 0.84584 0.84315 0.76392 1.90863 1.71994 1.27863 1.49587 1.24617 0.97139 0.97877 1.18505 1.20717 0.91038 0.99993 0.96372 1.18714 0.95357 0.93790 1.02952 1.20636 0.96083 0.96227 1.02494 1.24423 1.01086 0.98357 1.11668 1.24425 0.86101 1.00994 1.02852 1.86640 1.49300 1.65245 1.31236 0.95492 0.86477 0.78170 0.83896 1.82671 0.94545 1.07483 1.68450 1.21645 1.00687 0.95045 0.97943 1.21451 0.91500 0.97180 1.04031 0.91368 0.90044 0.91377 0.91154 0.91159 0.90069 0.91152 0.90844 0.90633 0.90793 0.90854 0.76657 0.82773 0.91244 0.89700 0.91775 0.85346 0.77317 1.16077 1.17044 0.91152 0.91024 0.90709 0.90625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.28 10.29 37.16 0.38 0.67 16 2 C 0.06 0.00 6.19 37.16 0.23 0.23 16 3 O -0.36 -0.43 10.12 -39.25 -0.40 -0.83 16 4 C 0.46 0.68 7.25 36.01 0.26 0.94 16 5 O -0.51 -2.21 15.73 -18.74 -0.29 -2.51 16 6 C -0.08 0.13 2.63 -91.77 -0.24 -0.12 16 7 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 8 C -0.11 0.28 5.14 -26.73 -0.14 0.15 16 9 C -0.11 0.37 5.20 -26.73 -0.14 0.23 16 10 C -0.10 0.34 2.22 -90.62 -0.20 0.14 16 11 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 12 C 0.12 -0.17 5.07 -4.04 -0.02 -0.19 16 13 N -0.73 0.45 5.28 -61.65 -0.33 0.13 16 14 C 0.59 1.50 7.78 -12.89 -0.10 1.40 16 15 O -0.53 -3.31 16.84 5.19 0.09 -3.22 16 16 C -0.26 -0.35 6.45 -36.79 -0.24 -0.58 16 17 C -0.05 -0.08 9.80 -40.44 -0.40 -0.47 16 18 C -0.10 -0.05 5.75 -106.46 -0.61 -0.66 16 19 C -0.10 0.04 8.67 36.00 0.31 0.35 16 20 C -0.24 0.11 5.54 -35.86 -0.20 -0.09 16 21 C -0.03 0.04 2.76 36.01 0.10 0.14 16 22 O -0.52 0.28 9.85 -35.23 -0.35 -0.06 16 23 Si 0.66 -1.16 31.30 -169.99 -5.32 -6.48 16 24 S 0.20 -0.29 19.78 -107.50 -2.13 -2.42 16 25 C -0.12 0.37 5.08 -26.73 -0.14 0.23 16 26 C -0.10 0.19 4.49 -26.73 -0.12 0.07 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.07 0.01 8.13 -51.93 -0.42 -0.41 16 31 H 0.07 0.01 8.13 -51.93 -0.42 -0.42 16 32 H 0.08 -0.20 8.11 -51.93 -0.42 -0.62 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 34 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 36 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.40 -1.10 6.77 -40.82 -0.28 -1.37 16 39 H 0.15 0.25 8.06 -52.49 -0.42 -0.17 16 40 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.08 0.01 6.41 -51.93 -0.33 -0.32 16 42 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 43 H 0.13 -0.28 7.96 -51.93 -0.41 -0.70 16 44 H 0.38 -1.09 8.66 45.56 0.39 -0.69 16 45 H -0.24 -0.25 7.11 56.52 0.40 0.15 16 46 H -0.25 -0.12 7.11 56.52 0.40 0.29 16 47 H 0.07 -0.25 7.18 -51.93 -0.37 -0.63 16 48 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.07 -0.08 8.10 -51.93 -0.42 -0.50 16 50 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 LS Contribution 414.90 15.07 6.25 6.25 Total: 0.00 -8.31 414.90 -11.95 -20.26 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -8.22 Total: -13.56 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: -1.25 Total: 2.44 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.33 Total: 0.13 kcal Atomic # 8 Polarization: -5.67 SS G_CDS: -0.95 Total: -6.63 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.32 Total: -6.48 kcal Atomic # 16 Polarization: -0.29 SS G_CDS: -2.13 Total: -2.42 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -8.31 -11.95 -20.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_6739946.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.597 kcal (2) G-P(sol) polarization free energy of solvation -8.308 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.856 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds