Wall clock time and date at job start Sun Mar 7 2021 07:18:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 O 1.45203 * 109.47184 * 2 1 4 4 C 1.34230 * 117.00071 * 179.97438 * 3 2 1 5 5 O 1.20822 * 120.00023 * 0.02562 * 4 3 2 6 6 C 1.50697 * 119.99718 * 180.02562 * 4 3 2 7 7 H 1.08999 * 109.47445 * 60.00613 * 6 4 3 8 8 C 1.53003 * 109.47001 * 180.02562 * 6 4 3 9 9 C 1.53004 * 109.47352 * 180.02562 * 8 6 4 10 10 C 1.53001 * 109.46855 * 299.99714 * 9 8 6 11 11 H 1.08999 * 109.47309 * 300.00309 * 10 9 8 12 12 C 1.53002 * 109.47251 * 179.97438 * 10 9 8 13 13 N 1.46494 * 109.47001 * 175.00022 * 12 10 9 14 14 C 1.34784 * 119.99635 * 180.02562 * 13 12 10 15 15 O 1.21623 * 120.00016 * 0.02562 * 14 13 12 16 16 C 1.47265 * 119.99864 * 179.97438 * 14 13 12 17 17 C 1.36766 * 126.94034 * 179.70540 * 16 14 13 18 18 C 1.50695 * 125.80481 * 359.97438 * 17 16 14 19 19 N 1.34659 * 108.39524 * 179.87439 * 17 16 14 20 20 C 1.36451 * 110.29617 * 0.41140 * 19 17 16 21 21 C 1.50708 * 125.56676 * 179.72758 * 20 19 17 22 22 O 1.42895 * 109.47265 * 65.00032 * 21 20 19 23 23 Si 1.86304 * 109.46679 * 184.99938 * 21 20 19 24 24 C 1.34478 * 108.85747 * 359.74948 * 20 19 17 25 25 C 1.53003 * 109.46907 * 60.00014 * 10 9 8 26 26 C 1.53001 * 109.47175 * 300.00154 * 6 4 3 27 27 H 1.09001 * 109.47216 * 59.99992 * 1 2 3 28 28 H 1.09000 * 109.47444 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47571 * 299.99814 * 1 2 3 30 30 H 1.08997 * 109.47571 * 240.00186 * 2 1 3 31 31 H 1.09001 * 109.47216 * 120.00008 * 2 1 3 32 32 H 1.08993 * 109.47263 * 59.99592 * 8 6 4 33 33 H 1.09000 * 109.46849 * 299.99540 * 8 6 4 34 34 H 1.08994 * 109.47246 * 180.02562 * 9 8 6 35 35 H 1.08998 * 109.46768 * 59.99279 * 9 8 6 36 36 H 1.09005 * 109.46767 * 55.00088 * 12 10 9 37 37 H 1.09002 * 109.47113 * 295.00428 * 12 10 9 38 38 H 0.96995 * 120.00292 * 0.27801 * 13 12 10 39 39 H 1.08998 * 109.47202 * 89.99210 * 18 17 16 40 40 H 1.08995 * 109.47397 * 210.00135 * 18 17 16 41 41 H 1.09006 * 109.47066 * 329.99241 * 18 17 16 42 42 H 0.97003 * 124.85351 * 180.13613 * 19 17 16 43 43 H 1.09000 * 109.47043 * 304.99342 * 21 20 19 44 44 H 0.96707 * 113.99475 * 59.99645 * 22 21 20 45 45 H 1.48500 * 110.00066 * 58.68182 * 23 21 20 46 46 H 1.48493 * 110.00107 * 179.97438 * 23 21 20 47 47 H 1.07999 * 126.83131 * 179.97438 * 24 20 19 48 48 H 1.09000 * 109.47591 * 60.00296 * 25 10 9 49 49 H 1.09006 * 109.47071 * 179.97438 * 25 10 9 50 50 H 1.09004 * 109.47446 * 299.99834 * 26 6 4 51 51 H 1.08999 * 109.47230 * 60.00150 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0139 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0012 7 1 3.5844 3.4693 0.8912 8 6 5.4485 2.8574 0.0010 9 6 6.0333 4.2713 0.0023 10 6 5.5618 5.0193 -1.2463 11 1 5.8977 4.4879 -2.1367 12 6 6.1460 6.4334 -1.2448 13 7 5.7933 7.1088 -2.4960 14 6 6.2036 8.3733 -2.7180 15 8 6.8671 8.9534 -1.8799 16 6 5.8495 9.0521 -3.9760 17 6 6.1832 10.3262 -4.3447 18 6 6.9896 11.2989 -3.5235 19 7 5.6704 10.5629 -5.5671 20 6 4.9913 9.4677 -6.0157 21 6 4.2781 9.3599 -7.3390 22 8 5.2308 9.4362 -8.4012 23 14 3.3777 7.7313 -7.4280 24 6 5.0621 8.5006 -5.0840 25 6 4.0338 5.0993 -1.2462 26 6 3.4494 3.6848 -1.2480 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 5.7844 2.3257 -0.8891 33 1 5.7845 2.3249 0.8908 34 1 7.1218 4.2142 0.0018 35 1 5.6973 4.8026 0.8927 36 1 7.2310 6.3781 -1.1551 37 1 5.7399 6.9934 -0.4025 38 1 5.2614 6.6473 -3.1630 39 1 8.0478 11.1821 -3.7576 40 1 6.6764 12.3169 -3.7550 41 1 6.8280 11.1012 -2.4638 42 1 5.7663 11.3947 -6.0569 43 1 3.5623 10.1764 -7.4335 44 1 5.9001 8.7384 -8.3800 45 1 2.4063 7.6262 -6.3098 46 1 2.6697 7.6128 -8.7279 47 1 4.6258 7.5143 -5.1402 48 1 3.6978 5.6307 -0.3558 49 1 3.6979 5.6326 -2.1355 50 1 3.7857 3.1530 -2.1381 51 1 2.3609 3.7418 -1.2484 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14654746_9865296.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:18:31 Heat of formation + Delta-G solvation = -138.206528 kcal Electronic energy + Delta-G solvation = -31120.475278 eV Core-core repulsion = 26792.886611 eV Total energy + Delta-G solvation = -4327.588667 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.192 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.46270 -41.70638 -40.32847 -39.26710 -37.83127 -37.54738 -35.73399 -33.25948 -32.86290 -32.48737 -31.89512 -31.66400 -29.09431 -27.65851 -25.57424 -24.64295 -23.86763 -23.46782 -22.61940 -21.65237 -21.40900 -20.96014 -20.34227 -19.13919 -18.60905 -17.56450 -17.55372 -17.23188 -17.00885 -16.71558 -16.54899 -16.24821 -15.76387 -15.39831 -15.37457 -15.18002 -14.94324 -14.83147 -14.72253 -14.55819 -14.39903 -14.10697 -13.89016 -13.81844 -13.63886 -13.49167 -13.39819 -13.33428 -13.01525 -12.96276 -12.84209 -12.58516 -12.28796 -12.19053 -12.18203 -12.10151 -11.83296 -11.57063 -11.47061 -11.21393 -11.12357 -10.77105 -10.65973 -10.02310 -9.80722 -9.16133 -5.12875 0.80684 1.09155 1.18015 1.25746 1.56958 1.68780 1.81130 2.13283 2.53239 2.68227 3.30784 3.41670 3.50075 3.51271 3.57031 3.84808 3.85191 3.91263 3.95762 4.00802 4.03953 4.11472 4.15981 4.22033 4.28244 4.29482 4.29507 4.37617 4.39933 4.47480 4.63682 4.67414 4.68496 4.70184 4.73474 4.78006 4.80254 4.91960 4.95018 4.96614 5.01666 5.02410 5.09306 5.11609 5.19829 5.22910 5.36077 5.52377 5.60497 5.67762 5.87460 6.36764 6.38835 6.71990 6.80840 7.50007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.358 6.358 4 C 0.464 3.536 5 O -0.507 6.507 6 C -0.079 4.079 7 H 0.110 0.890 8 C -0.103 4.103 9 C -0.111 4.111 10 C -0.103 4.103 11 H 0.081 0.919 12 C 0.126 3.874 13 N -0.727 5.727 14 C 0.593 3.407 15 O -0.548 6.548 16 C -0.236 4.236 17 C 0.120 3.880 18 C -0.099 4.099 19 N -0.536 5.536 20 C -0.014 4.014 21 C -0.051 4.051 22 O -0.544 6.544 23 Si 0.716 3.284 24 C -0.158 4.158 25 C -0.114 4.114 26 C -0.111 4.111 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.074 0.926 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.070 0.930 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.399 0.601 39 H 0.081 0.919 40 H 0.065 0.935 41 H 0.103 0.897 42 H 0.419 0.581 43 H 0.113 0.887 44 H 0.383 0.617 45 H -0.252 1.252 46 H -0.253 1.253 47 H 0.149 0.851 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.070 0.930 51 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.014 -0.898 -1.936 2.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.275 6.275 4 C 0.307 3.693 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.141 4.141 9 C -0.149 4.149 10 C -0.122 4.122 11 H 0.100 0.900 12 C 0.002 3.998 13 N -0.379 5.379 14 C 0.382 3.618 15 O -0.427 6.427 16 C -0.245 4.245 17 C 0.001 3.999 18 C -0.156 4.156 19 N -0.131 5.131 20 C -0.124 4.124 21 C -0.161 4.161 22 O -0.349 6.349 23 Si 0.615 3.385 24 C -0.183 4.183 25 C -0.152 4.152 26 C -0.148 4.148 27 H 0.086 0.914 28 H 0.099 0.901 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.093 0.907 33 H 0.093 0.907 34 H 0.094 0.906 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.087 0.913 38 H 0.234 0.766 39 H 0.099 0.901 40 H 0.084 0.916 41 H 0.122 0.878 42 H 0.256 0.744 43 H 0.130 0.870 44 H 0.230 0.770 45 H -0.176 1.176 46 H -0.178 1.178 47 H 0.167 0.833 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.089 0.911 51 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.490 -0.601 -1.665 3.055 hybrid contribution -0.250 0.571 -0.417 0.750 sum -2.740 -0.030 -2.082 3.441 Atomic orbital electron populations 1.21816 0.92389 1.03225 1.03623 1.23063 0.95551 0.79982 1.02693 1.86509 1.24543 1.32617 1.83819 1.23829 0.80609 0.92749 0.72145 1.90683 1.60461 1.43209 1.45026 1.21161 0.96913 0.89562 1.02214 0.87227 1.21442 0.91368 0.97251 1.04015 1.21511 1.01117 0.94724 0.97502 1.21484 0.95721 0.95050 0.99904 0.90021 1.21378 1.00308 0.91665 0.86429 1.45755 1.56547 1.14652 1.20951 1.17285 0.78562 0.80821 0.85162 1.90760 1.39800 1.65475 1.46693 1.19999 1.11691 0.95524 0.97306 1.20455 0.97858 0.95719 0.85912 1.20636 0.98661 0.95419 1.00875 1.41589 1.41927 1.14770 1.14855 1.20778 1.04332 0.88785 0.98489 1.24880 0.95346 1.13303 0.82590 1.86502 1.44176 1.56460 1.47806 0.94248 0.82506 0.81001 0.80712 1.21728 1.03979 0.98827 0.93733 1.21637 0.94430 0.96032 1.03069 1.21545 1.01517 0.95734 0.96021 0.91393 0.90058 0.91389 0.91155 0.91169 0.90725 0.90667 0.90644 0.91109 0.91213 0.91304 0.76610 0.90067 0.91616 0.87819 0.74417 0.87007 0.76957 1.17627 1.17764 0.83331 0.91041 0.91148 0.91142 0.90291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.26 10.29 37.15 0.38 0.64 16 2 C 0.06 0.02 6.19 37.15 0.23 0.25 16 3 O -0.36 -0.52 10.12 -39.26 -0.40 -0.91 16 4 C 0.46 0.83 7.26 36.00 0.26 1.09 16 5 O -0.51 -2.42 15.73 -18.75 -0.29 -2.71 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 8 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 9 C -0.11 0.27 5.20 -26.73 -0.14 0.14 16 10 C -0.10 0.29 2.23 -90.62 -0.20 0.09 16 11 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 12 C 0.13 -0.11 5.06 -4.04 -0.02 -0.13 16 13 N -0.73 0.29 5.28 -61.43 -0.32 -0.04 16 14 C 0.59 1.62 7.81 -12.59 -0.10 1.52 16 15 O -0.55 -3.26 14.82 5.26 0.08 -3.19 16 16 C -0.24 -0.38 6.29 -103.35 -0.65 -1.03 16 17 C 0.12 0.13 7.17 -81.89 -0.59 -0.46 16 18 C -0.10 -0.02 9.88 36.00 0.36 0.33 16 19 N -0.54 0.27 5.90 -5.42 -0.03 0.24 16 20 C -0.01 0.01 6.47 -81.86 -0.53 -0.52 16 21 C -0.05 0.08 3.08 36.01 0.11 0.19 16 22 O -0.54 0.60 12.88 -35.23 -0.45 0.15 16 23 Si 0.72 -1.86 30.58 -169.99 -5.20 -7.05 16 24 C -0.16 0.10 9.03 -37.50 -0.34 -0.23 16 25 C -0.11 0.35 5.08 -26.70 -0.14 0.22 16 26 C -0.11 0.27 5.14 -26.70 -0.14 0.13 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.07 0.02 8.13 -51.93 -0.42 -0.40 16 31 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 32 H 0.07 -0.02 8.10 -51.93 -0.42 -0.44 16 33 H 0.07 -0.02 8.10 -51.93 -0.42 -0.44 16 34 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 38 H 0.40 -1.08 6.77 -40.82 -0.28 -1.36 16 39 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.10 0.22 6.47 -51.93 -0.34 -0.11 16 42 H 0.42 -0.98 8.96 -40.82 -0.37 -1.34 16 43 H 0.11 -0.15 7.96 -51.93 -0.41 -0.56 16 44 H 0.38 -1.77 8.70 45.56 0.40 -1.37 16 45 H -0.25 0.09 7.11 56.52 0.40 0.49 16 46 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 47 H 0.15 -0.51 5.88 -52.49 -0.31 -0.81 16 48 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 49 H 0.07 -0.25 7.17 -51.93 -0.37 -0.62 16 50 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 51 H 0.08 -0.18 8.11 -51.93 -0.42 -0.60 16 LS Contribution 411.16 15.07 6.20 6.20 Total: 0.00 -9.50 411.16 -10.76 -20.26 By element: Atomic # 1 Polarization: -6.54 SS G_CDS: -8.48 Total: -15.02 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: -1.86 Total: 2.07 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.36 Total: 0.21 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.07 Total: -6.66 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.20 Total: -7.05 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.50 -10.76 -20.26 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14654746_9865296.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.947 kcal (2) G-P(sol) polarization free energy of solvation -9.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.763 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.207 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds