Wall clock time and date at job start Sun Mar 7 2021 02:32:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 O 1.42904 * 109.47230 * 2 1 4 4 C 1.35891 * 116.99988 * 275.32525 * 3 2 1 5 5 C 1.38738 * 120.05912 * 5.08370 * 4 3 2 6 6 C 1.38143 * 119.94453 * 179.74284 * 5 4 3 7 7 C 1.38273 * 120.05575 * 0.50834 * 6 5 4 8 8 C 1.50697 * 119.94386 * 179.74762 * 7 6 5 9 9 O 1.42900 * 109.47397 * 120.02060 * 8 7 6 10 10 Si 1.86299 * 109.47046 * 0.02562 * 8 7 6 11 11 C 1.38266 * 120.11071 * 359.76778 * 7 6 5 12 12 C 1.38143 * 120.05277 * 359.97438 * 11 7 6 13 13 C 1.50696 * 109.47527 * 120.00283 * 2 1 3 14 14 O 1.21281 * 120.00444 * 244.99988 * 13 2 1 15 15 N 1.34781 * 119.99857 * 64.99498 * 13 2 1 16 16 C 1.46500 * 119.99815 * 180.02562 * 15 13 2 17 17 H 1.09003 * 112.91080 * 23.75625 * 16 15 13 18 18 C 1.53789 * 113.61245 * 155.00200 * 16 15 13 19 19 C 1.53782 * 87.17076 * 140.02292 * 18 16 15 20 20 H 1.09004 * 113.61356 * 89.07643 * 19 18 16 21 21 C 1.53006 * 113.61422 * 219.97592 * 19 18 16 22 22 N 1.46495 * 109.46879 * 185.00432 * 21 19 18 23 23 C 1.34946 * 126.03882 * 124.71964 * 22 21 19 24 24 C 1.35316 * 107.74817 * 179.83247 * 23 22 21 25 25 C 1.39870 * 107.91792 * 0.42780 * 24 23 22 26 26 N 1.30835 * 108.20248 * 359.73217 * 25 24 23 27 27 C 1.53785 * 87.08210 * 334.52545 * 19 18 16 28 28 H 1.08998 * 109.47059 * 299.99603 * 1 2 3 29 29 H 1.08997 * 109.47414 * 59.99768 * 1 2 3 30 30 H 1.09006 * 109.47563 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47059 * 240.00397 * 2 1 3 32 32 H 1.07992 * 120.02493 * 359.97438 * 5 4 3 33 33 H 1.07998 * 119.97519 * 180.23641 * 6 5 4 34 34 H 1.08998 * 109.47162 * 240.02509 * 8 7 6 35 35 H 0.96699 * 113.99819 * 179.97438 * 9 8 7 36 36 H 1.48503 * 110.00065 * 60.00504 * 10 8 7 37 37 H 1.48507 * 110.00011 * 181.31948 * 10 8 7 38 38 H 1.07991 * 119.97171 * 179.97438 * 11 7 6 39 39 H 1.08004 * 120.02219 * 180.02562 * 12 11 7 40 40 H 0.96999 * 120.00376 * 0.02562 * 15 13 2 41 41 H 1.08999 * 113.61218 * 25.43665 * 18 16 15 42 42 H 1.08994 * 113.61202 * 254.61275 * 18 16 15 43 43 H 1.08997 * 109.46748 * 305.00387 * 21 19 18 44 44 H 1.08996 * 109.46706 * 64.99996 * 21 19 18 45 45 H 1.08004 * 126.12249 * 359.97438 * 23 22 21 46 46 H 1.07997 * 126.04270 * 180.15551 * 24 23 22 47 47 H 1.07999 * 125.89578 * 179.76446 * 25 24 23 48 48 H 1.08999 * 113.61105 * 139.97961 * 27 19 18 49 49 H 1.08995 * 113.61267 * 270.79682 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1060 1.9664 -1.2056 5 6 1.6544 1.3304 -2.3529 6 6 1.7520 1.9641 -3.5765 7 6 2.3089 3.2269 -3.6598 8 6 2.4194 3.9136 -4.9967 9 8 1.6854 5.1393 -4.9649 10 14 1.7219 2.8065 -6.3229 11 6 2.7650 3.8606 -2.5187 12 6 2.6648 3.2333 -1.2920 13 6 2.0324 -0.7104 1.2304 14 8 2.6530 -0.0980 2.0734 15 7 1.7919 -2.0265 1.3940 16 6 2.2798 -2.7170 2.5904 17 1 2.4415 -2.0440 3.4325 18 6 1.4674 -3.9717 2.9519 19 6 2.8054 -4.6444 3.3013 20 1 3.1106 -4.4974 4.3373 21 6 2.8910 -6.1060 2.8568 22 7 4.1460 -6.6896 3.3370 23 6 4.2669 -7.8022 4.0910 24 6 5.5854 -8.0062 4.3168 25 6 6.2940 -6.9776 3.6872 26 7 5.4322 -6.1879 3.0995 27 6 3.4656 -3.6622 2.3193 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3634 -1.0277 -0.0005 31 1 1.8932 -0.5138 -0.8900 32 1 1.2234 0.3422 -2.2889 33 1 1.3971 1.4710 -4.4694 34 1 3.4672 4.1230 -5.2122 35 1 1.7129 5.6358 -5.7942 36 1 0.2937 2.5137 -6.0408 37 1 1.8539 3.4590 -7.6505 38 1 3.2000 4.8467 -2.5865 39 1 3.0208 3.7289 -0.4009 40 1 1.2957 -2.5164 0.7197 41 1 0.9606 -4.4243 2.0995 42 1 0.8105 -3.8341 3.8107 43 1 2.0499 -6.6616 3.2714 44 1 2.8594 -6.1572 1.7686 45 1 3.4566 -8.4205 4.4481 46 1 6.0146 -8.8171 4.8865 47 1 7.3672 -6.8567 3.6859 48 1 4.4225 -3.2735 2.6677 49 1 3.5065 -4.0308 1.2944 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:36 Heat of formation + Delta-G solvation = 39.862541 kcal Electronic energy + Delta-G solvation = -30549.214905 eV Core-core repulsion = 26253.463370 eV Total energy + Delta-G solvation = -4295.751535 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.173 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.08085 -41.75121 -40.91213 -39.71288 -38.74098 -37.30072 -35.27863 -33.94471 -32.94316 -31.84198 -31.56922 -30.92416 -28.59700 -26.86530 -26.72597 -25.71543 -24.40180 -23.62351 -22.26216 -21.92701 -21.55657 -21.48195 -20.69181 -19.47305 -18.61028 -18.45526 -18.18952 -17.43490 -16.90633 -16.75122 -16.71607 -16.55046 -15.82009 -15.76137 -15.67071 -15.44166 -15.12813 -15.01465 -14.89292 -14.53151 -14.26961 -14.08360 -13.95342 -13.77979 -13.69325 -13.59538 -13.53799 -13.50835 -13.37052 -13.07114 -12.91259 -12.45634 -12.31592 -12.09559 -11.96691 -11.89164 -11.66765 -11.60764 -11.42330 -10.77005 -10.49026 -10.30127 -10.13088 -9.97843 -9.47695 -9.13830 -4.99217 0.33632 0.35713 1.01453 1.27371 1.46828 1.49763 1.57190 1.59777 1.93598 2.00895 2.48429 2.66452 3.17454 3.29002 3.34563 3.38897 3.51606 3.58829 3.61625 3.75362 3.80340 3.83303 3.90506 3.93717 3.93942 4.05190 4.15435 4.23790 4.25764 4.30758 4.38379 4.45219 4.49991 4.54724 4.57200 4.64514 4.70080 4.72919 4.82580 4.90110 4.91257 5.00164 5.04757 5.09855 5.15709 5.22256 5.30280 5.42040 5.56600 5.73053 5.78294 6.10362 6.25376 6.40351 6.44859 6.83616 7.09634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.208 4.208 6 C -0.073 4.073 7 C -0.111 4.111 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.679 3.321 11 C -0.049 4.049 12 C -0.146 4.146 13 C 0.520 3.480 14 O -0.510 6.510 15 N -0.716 5.716 16 C 0.123 3.877 17 H 0.118 0.882 18 C -0.137 4.137 19 C -0.119 4.119 20 H 0.100 0.900 21 C 0.145 3.855 22 N -0.373 5.373 23 C 0.050 3.950 24 C -0.274 4.274 25 C 0.042 3.958 26 N -0.289 5.289 27 C -0.134 4.134 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.101 0.899 32 H 0.134 0.866 33 H 0.130 0.870 34 H 0.076 0.924 35 H 0.379 0.621 36 H -0.256 1.256 37 H -0.261 1.261 38 H 0.133 0.867 39 H 0.136 0.864 40 H 0.402 0.598 41 H 0.091 0.909 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.086 0.914 45 H 0.172 0.828 46 H 0.147 0.853 47 H 0.182 0.818 48 H 0.078 0.922 49 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.707 -6.532 -2.719 7.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.089 3.911 5 C -0.226 4.226 6 C -0.091 4.091 7 C -0.111 4.111 8 C -0.181 4.181 9 O -0.344 6.344 10 Si 0.580 3.420 11 C -0.068 4.068 12 C -0.164 4.164 13 C 0.304 3.696 14 O -0.384 6.384 15 N -0.369 5.369 16 C 0.019 3.981 17 H 0.136 0.864 18 C -0.176 4.176 19 C -0.138 4.138 20 H 0.118 0.882 21 C 0.024 3.976 22 N -0.155 5.155 23 C -0.096 4.096 24 C -0.304 4.304 25 C -0.144 4.144 26 N -0.111 5.111 27 C -0.173 4.173 28 H 0.096 0.904 29 H 0.098 0.902 30 H 0.098 0.902 31 H 0.119 0.881 32 H 0.151 0.849 33 H 0.147 0.853 34 H 0.094 0.906 35 H 0.227 0.773 36 H -0.180 1.180 37 H -0.187 1.187 38 H 0.151 0.849 39 H 0.154 0.846 40 H 0.236 0.764 41 H 0.110 0.890 42 H 0.100 0.900 43 H 0.116 0.884 44 H 0.104 0.896 45 H 0.190 0.810 46 H 0.164 0.836 47 H 0.199 0.801 48 H 0.097 0.903 49 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -3.224 -5.168 -2.684 6.656 hybrid contribution -0.373 -0.042 -0.137 0.400 sum -3.597 -5.211 -2.821 6.932 Atomic orbital electron populations 1.22355 0.92320 1.03884 1.04945 1.22202 0.95908 0.83323 0.98013 1.86231 1.80873 1.25392 1.27073 1.19070 0.95180 0.92855 0.83951 1.21164 1.07403 1.01779 0.92265 1.20706 0.97072 0.94265 0.97012 1.19161 1.02832 0.94918 0.94230 1.24729 0.99408 0.91676 1.02262 1.86594 1.74501 1.33699 1.39579 0.95196 0.83675 0.87039 0.76080 1.20826 0.96316 0.99044 0.90565 1.20519 1.03366 0.93607 0.98958 1.20125 0.79789 0.82225 0.87429 1.90779 1.38569 1.65717 1.43292 1.45820 1.58312 1.08826 1.23956 1.22602 0.94884 0.92049 0.88602 0.86411 1.23384 0.96318 0.95332 1.02554 1.22627 0.97374 0.92731 1.01110 0.88152 1.21726 0.81694 0.93907 1.00271 1.48725 1.05963 1.20317 1.40543 1.22606 0.99181 0.91136 0.96684 1.21562 0.92482 1.04749 1.11562 1.23956 1.00005 0.93471 0.96964 1.77396 0.87364 1.22482 1.23837 1.23498 0.98782 0.95423 0.99572 0.90446 0.90249 0.90209 0.88133 0.84864 0.85280 0.90622 0.77305 1.18023 1.18667 0.84922 0.84642 0.76360 0.89026 0.89970 0.88358 0.89588 0.81046 0.83557 0.80086 0.90323 0.89478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.39 9.12 37.15 0.34 0.73 16 2 C 0.07 -0.01 2.64 -27.89 -0.07 -0.08 16 3 O -0.28 -0.98 9.34 -39.26 -0.37 -1.35 16 4 C 0.13 0.34 6.60 -39.21 -0.26 0.08 16 5 C -0.21 -0.10 8.24 -39.43 -0.32 -0.42 16 6 C -0.07 -0.04 8.66 -39.60 -0.34 -0.38 16 7 C -0.11 -0.18 5.42 -104.60 -0.57 -0.74 16 8 C -0.07 -0.01 2.81 36.00 0.10 0.09 16 9 O -0.54 -0.77 12.74 -35.23 -0.45 -1.22 16 10 Si 0.68 -0.59 29.78 -169.99 -5.06 -5.65 16 11 C -0.05 -0.10 9.60 -39.61 -0.38 -0.48 16 12 C -0.15 -0.39 9.99 -39.43 -0.39 -0.78 16 13 C 0.52 0.92 7.18 -10.99 -0.08 0.84 16 14 O -0.51 -3.49 16.11 -14.30 -0.23 -3.72 16 15 N -0.72 1.29 5.32 -52.87 -0.28 1.01 16 16 C 0.12 -0.15 4.25 -66.97 -0.28 -0.43 16 17 H 0.12 0.13 7.47 -51.93 -0.39 -0.26 16 18 C -0.14 0.53 7.39 -25.91 -0.19 0.34 16 19 C -0.12 0.26 3.83 -89.80 -0.34 -0.08 16 20 H 0.10 -0.07 8.14 -51.93 -0.42 -0.50 16 21 C 0.15 -0.37 6.35 -4.04 -0.03 -0.39 16 22 N -0.37 -0.26 3.68 -61.37 -0.23 -0.49 16 23 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 24 C -0.27 -0.20 10.80 -40.01 -0.43 -0.63 16 25 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 26 N -0.29 -0.90 12.42 30.62 0.38 -0.52 16 27 C -0.13 0.10 7.44 -25.77 -0.19 -0.09 16 28 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.08 -0.18 6.91 -51.93 -0.36 -0.54 16 30 H 0.08 -0.39 7.93 -51.93 -0.41 -0.80 16 31 H 0.10 -0.26 6.31 -51.93 -0.33 -0.59 16 32 H 0.13 -0.30 5.43 -52.49 -0.29 -0.59 16 33 H 0.13 -0.21 4.87 -52.49 -0.26 -0.46 16 34 H 0.08 -0.11 7.96 -51.93 -0.41 -0.52 16 35 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 36 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 37 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 38 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 39 H 0.14 0.28 8.06 -52.48 -0.42 -0.14 16 40 H 0.40 -2.05 8.51 -40.82 -0.35 -2.40 16 41 H 0.09 -0.52 8.08 -51.93 -0.42 -0.94 16 42 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 43 H 0.10 -0.48 8.07 -51.93 -0.42 -0.90 16 44 H 0.09 -0.26 7.84 -51.93 -0.41 -0.67 16 45 H 0.17 -0.60 8.06 -52.48 -0.42 -1.02 16 46 H 0.15 -0.15 8.06 -52.49 -0.42 -0.57 16 47 H 0.18 -0.11 8.06 -52.49 -0.42 -0.54 16 48 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 49 H 0.09 -0.10 7.89 -51.93 -0.41 -0.51 16 LS Contribution 406.26 15.07 6.12 6.12 Total: 0.00 -11.93 406.26 -11.02 -22.95 By element: Atomic # 1 Polarization: -7.30 SS G_CDS: -7.05 Total: -14.35 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.86 Total: -2.78 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.13 Total: 0.00 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -1.05 Total: -6.29 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.06 Total: -5.65 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -11.93 -11.02 -22.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.809 kcal (2) G-P(sol) polarization free energy of solvation -11.930 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.947 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.863 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds