Wall clock time and date at job start Sun Mar 7 2021 02:32:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47221 * 2 1 4 4 C 1.50698 * 109.47045 * 120.00359 * 2 1 3 5 5 C 1.35452 * 126.06509 * 245.04292 * 4 2 1 6 6 N 1.35533 * 108.87282 * 179.69355 * 5 4 2 7 7 C 1.37649 * 108.64127 * 0.43538 * 6 5 4 8 8 C 1.46680 * 126.23564 * 179.82888 * 7 6 5 9 9 O 1.21693 * 120.00596 * 179.69118 * 8 7 6 10 10 N 1.34783 * 119.99517 * 359.68910 * 8 7 6 11 11 C 1.46503 * 119.99857 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.84839 * 23.80886 * 11 10 8 13 13 C 1.53779 * 113.61406 * 155.00353 * 11 10 8 14 14 C 1.53776 * 87.08234 * 139.98351 * 13 11 10 15 15 H 1.09000 * 113.61460 * 89.19991 * 14 13 11 16 16 C 1.53004 * 113.61565 * 220.01978 * 14 13 11 17 17 N 1.46494 * 109.47106 * 184.99762 * 16 14 13 18 18 C 1.34954 * 126.03475 * 124.99860 * 17 16 14 19 19 C 1.35316 * 107.74368 * 179.73518 * 18 17 16 20 20 C 1.39868 * 107.92272 * 0.02562 * 19 18 17 21 21 N 1.30837 * 108.20148 * 359.97438 * 20 19 18 22 22 C 1.53780 * 113.61546 * 252.50025 * 11 10 8 23 23 C 1.37873 * 107.53291 * 359.56862 * 7 6 5 24 24 H 0.96691 * 114.00275 * 300.00257 * 1 2 3 25 25 H 1.09004 * 109.46892 * 239.99661 * 2 1 3 26 26 H 1.48493 * 109.99984 * 178.68114 * 3 2 1 27 27 H 1.48498 * 109.99967 * 300.00194 * 3 2 1 28 28 H 1.08000 * 125.56330 * 359.91946 * 5 4 2 29 29 H 0.96998 * 125.67995 * 180.29566 * 6 5 4 30 30 H 0.97001 * 120.00238 * 0.02562 * 10 8 7 31 31 H 1.08995 * 113.61433 * 25.43135 * 13 11 10 32 32 H 1.09004 * 113.69022 * 254.54305 * 13 11 10 33 33 H 1.08999 * 109.46666 * 64.99595 * 16 14 13 34 34 H 1.09007 * 109.46675 * 304.99967 * 16 14 13 35 35 H 1.07999 * 126.12426 * 359.75442 * 18 17 16 36 36 H 1.07999 * 126.03437 * 179.97438 * 19 18 17 37 37 H 1.08001 * 125.89990 * 179.97438 * 20 19 18 38 38 H 1.09000 * 113.61345 * 105.47179 * 22 11 10 39 39 H 1.08996 * 113.61639 * 334.56880 * 22 11 10 40 40 H 1.08005 * 126.45515 * 180.22688 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6327 -0.1498 2.2445 6 7 2.8990 -1.1014 3.1721 7 6 2.3679 -2.2961 2.7417 8 6 2.4357 -3.5798 3.4483 9 8 1.9192 -4.5693 2.9636 10 7 3.0703 -3.6633 4.6344 11 6 3.1377 -4.9452 5.3405 12 1 3.0284 -5.8013 4.6747 13 6 4.3352 -5.0586 6.2985 14 6 3.3837 -5.7645 7.2788 15 1 3.3419 -6.8454 7.1449 16 6 3.5920 -5.3542 8.7380 17 7 2.7273 -6.1627 9.6008 18 6 3.1286 -6.9106 10.6501 19 6 2.0310 -7.4945 11.1841 20 6 0.9210 -7.0902 10.4353 21 7 1.3372 -6.2917 9.4861 22 6 2.2366 -5.0112 6.5849 23 6 1.7553 -2.0653 1.5283 24 1 -0.3933 0.4417 0.7649 25 1 1.7923 -0.5139 -0.8900 26 1 3.5346 1.7702 0.0321 27 1 1.5615 2.4679 -1.2085 28 1 2.9280 0.8873 2.3058 29 1 3.3850 -0.9640 4.0002 30 1 3.4818 -2.8745 5.0210 31 1 4.6986 -4.0964 6.6591 32 1 5.1341 -5.7004 5.9268 33 1 3.3420 -4.3001 8.8581 34 1 4.6340 -5.5143 9.0151 35 1 4.1439 -7.0226 11.0008 36 1 2.0150 -8.1566 12.0373 37 1 -0.1029 -7.3861 10.6104 38 1 1.3402 -5.6151 6.4433 39 1 2.0261 -4.0359 7.0238 40 1 1.2377 -2.7938 0.9218 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:40 Heat of formation + Delta-G solvation = 90.206218 kcal Electronic energy + Delta-G solvation = -23461.020800 eV Core-core repulsion = 19860.009991 eV Total energy + Delta-G solvation = -3601.010809 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.51397 -42.05901 -40.90715 -39.23724 -37.61704 -35.24150 -33.66706 -32.49245 -30.99792 -30.69581 -28.61787 -26.88367 -26.58291 -24.98531 -23.21622 -21.94234 -21.54239 -21.40949 -21.00776 -20.64081 -19.80046 -18.32837 -17.52151 -17.33459 -16.93002 -16.53778 -16.39498 -15.88924 -15.73938 -15.51501 -15.25136 -15.00424 -14.80551 -14.58127 -14.35175 -13.99007 -13.90943 -13.72127 -13.59143 -13.55619 -13.45728 -13.07301 -12.35010 -12.22865 -11.99390 -11.95414 -11.62430 -11.44205 -11.10404 -10.34848 -10.31593 -10.18217 -9.96535 -9.49254 -9.32080 -5.05463 0.39457 1.00063 1.34393 1.48793 1.55794 1.65378 1.91591 1.99564 1.99922 2.04954 2.35613 3.15828 3.27560 3.48691 3.61257 3.62566 3.74206 3.86770 3.88873 3.92368 4.01741 4.03506 4.13619 4.24061 4.34401 4.46893 4.54763 4.61658 4.69828 4.71434 4.80544 4.89141 4.89722 5.03049 5.05227 5.08891 5.14370 5.38957 5.58789 5.76901 5.78533 6.08751 6.18292 6.39736 6.72045 6.82178 7.11584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.033 4.033 3 Si 0.686 3.314 4 C -0.211 4.211 5 C 0.035 3.965 6 N -0.536 5.536 7 C -0.059 4.059 8 C 0.591 3.409 9 O -0.523 6.523 10 N -0.722 5.722 11 C 0.124 3.876 12 H 0.119 0.881 13 C -0.138 4.138 14 C -0.118 4.118 15 H 0.101 0.899 16 C 0.146 3.854 17 N -0.373 5.373 18 C 0.050 3.950 19 C -0.274 4.274 20 C 0.042 3.958 21 N -0.289 5.289 22 C -0.133 4.133 23 C -0.075 4.075 24 H 0.377 0.623 25 H 0.111 0.889 26 H -0.258 1.258 27 H -0.256 1.256 28 H 0.176 0.824 29 H 0.417 0.583 30 H 0.394 0.606 31 H 0.089 0.911 32 H 0.082 0.918 33 H 0.085 0.915 34 H 0.098 0.902 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.079 0.921 39 H 0.085 0.915 40 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.095 4.293 6.128 9.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.145 4.145 3 Si 0.588 3.412 4 C -0.218 4.218 5 C -0.101 4.101 6 N -0.132 5.132 7 C -0.171 4.171 8 C 0.379 3.621 9 O -0.398 6.398 10 N -0.373 5.373 11 C 0.019 3.981 12 H 0.137 0.863 13 C -0.177 4.177 14 C -0.138 4.138 15 H 0.119 0.881 16 C 0.024 3.976 17 N -0.156 5.156 18 C -0.096 4.096 19 C -0.303 4.303 20 C -0.144 4.144 21 N -0.111 5.111 22 C -0.172 4.172 23 C -0.101 4.101 24 H 0.224 0.776 25 H 0.129 0.871 26 H -0.182 1.182 27 H -0.181 1.181 28 H 0.193 0.807 29 H 0.255 0.745 30 H 0.228 0.772 31 H 0.108 0.892 32 H 0.101 0.899 33 H 0.103 0.897 34 H 0.116 0.884 35 H 0.190 0.810 36 H 0.165 0.835 37 H 0.199 0.801 38 H 0.098 0.902 39 H 0.104 0.896 40 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 5.129 4.622 3.848 7.904 hybrid contribution 0.887 -0.676 1.293 1.708 sum 6.016 3.946 5.141 8.843 Atomic orbital electron populations 1.86506 1.17431 1.81740 1.49016 1.24377 0.84779 1.09026 0.96329 0.95201 0.80409 0.77752 0.87793 1.19900 1.07615 0.95183 0.99091 1.21865 1.03135 0.94638 0.90510 1.41911 1.44203 1.07805 1.19247 1.20422 1.10959 0.86058 0.99689 1.17090 0.78120 0.86724 0.80181 1.90883 1.45995 1.36177 1.66712 1.45845 1.57831 1.12060 1.21556 1.22554 0.96348 0.87087 0.92114 0.86269 1.23386 0.97061 1.01498 0.95750 1.22629 0.97891 1.01117 0.92153 0.88091 1.21721 0.92610 0.94638 0.88617 1.48723 1.05666 1.37210 1.23994 1.22606 1.00585 0.95587 0.90830 1.21565 0.91741 1.10361 1.06663 1.23961 1.00368 0.96494 0.93559 1.77399 0.88826 1.21739 1.23101 1.23443 0.97993 1.00914 0.94866 1.21236 0.99070 0.95706 0.94110 0.77578 0.87135 1.18245 1.18064 0.80692 0.74505 0.77247 0.89229 0.89939 0.89682 0.88370 0.81048 0.83535 0.80060 0.90236 0.89611 0.83212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.57 12.88 -35.23 -0.45 -1.02 16 2 C -0.03 0.00 3.02 36.00 0.11 0.11 16 3 Si 0.69 -1.17 30.60 -169.99 -5.20 -6.37 16 4 C -0.21 -0.05 5.43 -105.02 -0.57 -0.62 16 5 C 0.04 -0.08 10.45 -16.91 -0.18 -0.26 16 6 N -0.54 1.39 5.99 -9.39 -0.06 1.33 16 7 C -0.06 -0.07 7.06 -81.98 -0.58 -0.64 16 8 C 0.59 1.45 7.79 -12.85 -0.10 1.35 16 9 O -0.52 -3.56 16.48 5.19 0.09 -3.47 16 10 N -0.72 0.91 5.35 -54.32 -0.29 0.61 16 11 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 12 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 13 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 14 C -0.12 0.25 3.83 -89.81 -0.34 -0.10 16 15 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 16 C 0.15 -0.35 6.35 -4.04 -0.03 -0.38 16 17 N -0.37 -0.29 3.68 -61.36 -0.23 -0.51 16 18 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 19 C -0.27 -0.21 10.80 -40.01 -0.43 -0.64 16 20 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 21 N -0.29 -0.92 12.42 30.62 0.38 -0.54 16 22 C -0.13 0.08 7.43 -25.92 -0.19 -0.11 16 23 C -0.07 -0.18 10.59 -39.12 -0.41 -0.60 16 24 H 0.38 -1.12 8.70 45.56 0.40 -0.73 16 25 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 26 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 27 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 28 H 0.18 -0.96 6.21 -52.49 -0.33 -1.29 16 29 H 0.42 -2.55 8.19 -40.82 -0.33 -2.88 16 30 H 0.39 -1.78 7.86 -40.82 -0.32 -2.10 16 31 H 0.09 -0.49 8.08 -51.93 -0.42 -0.90 16 32 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 33 H 0.08 -0.25 7.84 -51.93 -0.41 -0.66 16 34 H 0.10 -0.47 8.07 -51.92 -0.42 -0.89 16 35 H 0.17 -0.59 8.06 -52.49 -0.42 -1.01 16 36 H 0.15 -0.14 8.06 -52.49 -0.42 -0.57 16 37 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 38 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 39 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 40 H 0.15 0.54 8.06 -52.48 -0.42 0.11 16 LS Contribution 344.39 15.07 5.19 5.19 Total: 0.00 -11.50 344.39 -9.38 -20.88 By element: Atomic # 1 Polarization: -8.58 SS G_CDS: -5.20 Total: -13.78 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -3.61 Total: -2.32 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.19 Total: 0.90 kcal Atomic # 8 Polarization: -4.13 SS G_CDS: -0.37 Total: -4.50 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.20 Total: -6.37 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -11.50 -9.38 -20.88 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.084 kcal (2) G-P(sol) polarization free energy of solvation -11.499 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.878 kcal (6) G-S(sol) free energy of system = (1) + (5) 90.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds