Wall clock time and date at job start Sun Mar 7 2021 02:32:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37647 * 125.67696 * 2 1 4 4 C 1.46680 * 126.23571 * 359.97438 * 3 2 1 5 5 O 1.21697 * 119.99413 * 4.64970 * 4 3 2 6 6 N 1.34772 * 120.00184 * 184.64922 * 4 3 2 7 7 C 1.46502 * 119.99964 * 174.89400 * 6 4 3 8 8 H 1.09001 * 112.90732 * 336.26234 * 7 6 4 9 9 C 1.53787 * 113.61004 * 107.50276 * 7 6 4 10 10 C 1.53783 * 87.07577 * 139.98421 * 9 7 6 11 11 H 1.08998 * 113.61758 * 89.12166 * 10 9 7 12 12 C 1.53003 * 113.68728 * 220.00579 * 10 9 7 13 13 N 1.46497 * 109.47323 * 272.53410 * 12 10 9 14 14 C 1.34952 * 126.03551 * 125.00099 * 13 12 10 15 15 C 1.35313 * 107.74918 * 179.97438 * 14 13 12 16 16 C 1.39873 * 107.91835 * 0.02562 * 15 14 13 17 17 N 1.30840 * 108.20083 * 359.74217 * 16 15 14 18 18 C 1.53773 * 87.08404 * 334.56713 * 10 9 7 19 19 C 1.37876 * 107.53500 * 179.73749 * 3 2 1 20 20 C 1.39837 * 107.08563 * 0.22431 * 19 3 2 21 21 C 1.35453 * 107.86271 * 0.02562 * 20 19 3 22 22 C 1.50700 * 125.56317 * 179.97438 * 21 20 19 23 23 O 1.42898 * 109.47207 * 150.02381 * 22 21 20 24 24 Si 1.86300 * 109.47449 * 30.01743 * 22 21 20 25 25 H 1.09003 * 109.46611 * 95.78550 * 1 2 3 26 26 H 1.09008 * 109.46788 * 215.77795 * 1 2 3 27 27 H 1.08991 * 109.47226 * 335.78289 * 1 2 3 28 28 H 0.96995 * 120.00051 * 354.89962 * 6 4 3 29 29 H 1.08998 * 113.61212 * 254.53061 * 9 7 6 30 30 H 1.08998 * 113.61400 * 25.43823 * 9 7 6 31 31 H 1.08996 * 109.47130 * 32.54097 * 12 10 9 32 32 H 1.09003 * 109.46686 * 152.53765 * 12 10 9 33 33 H 1.07998 * 126.12479 * 0.02562 * 14 13 12 34 34 H 1.07996 * 126.04473 * 180.02562 * 15 14 13 35 35 H 1.07998 * 125.89845 * 180.02562 * 16 15 14 36 36 H 1.08999 * 113.61567 * 270.88514 * 18 10 9 37 37 H 1.08997 * 113.61595 * 139.98004 * 18 10 9 38 38 H 1.08000 * 126.45819 * 180.26315 * 19 3 2 39 39 H 1.07997 * 126.07001 * 180.02562 * 20 19 3 40 40 H 1.09000 * 109.46890 * 270.01481 * 22 21 20 41 41 H 0.96706 * 113.99514 * 299.99411 * 23 22 21 42 42 H 1.48499 * 109.99997 * 180.02562 * 24 22 21 43 43 H 1.48501 * 109.99555 * 301.32284 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 -0.0005 5 8 0.6249 2.7646 0.0844 6 7 2.7090 3.5142 -0.0951 7 6 2.2492 4.9006 -0.2083 8 1 1.2393 4.9811 -0.6104 9 6 2.4721 5.7296 1.0676 10 6 2.8744 6.8935 0.1465 11 1 2.0355 7.5190 -0.1586 12 6 4.0629 7.7055 0.6654 13 7 3.5799 8.7631 1.5567 14 6 3.9808 8.9747 2.8278 15 6 3.2999 10.0432 3.3026 16 6 2.4533 10.5000 2.2871 17 7 2.6242 9.7365 1.2384 18 6 3.2621 5.8314 -0.8957 19 6 3.5780 0.6888 0.0060 20 6 3.5522 -0.7093 0.0044 21 6 2.2556 -1.1009 -0.0030 22 6 1.7710 -2.5279 -0.0076 23 8 0.5093 -2.6047 0.6588 24 14 3.0067 -3.6063 0.8760 25 1 -0.3633 -0.1036 -1.0225 26 1 -0.3633 -0.8338 0.6009 27 1 -0.3633 0.9371 0.4215 28 1 3.6587 3.3173 -0.0882 29 1 1.5586 5.9155 1.6326 30 1 3.2885 5.3627 1.6896 31 1 4.7396 7.0496 1.2131 32 1 4.5922 8.1529 -0.1759 33 1 4.7144 8.3955 3.3688 34 1 3.3934 10.4683 4.2910 35 1 1.7788 11.3407 2.3553 36 1 4.2945 5.4923 -0.8104 37 1 2.9864 6.0994 -1.9156 38 1 4.4583 1.3145 0.0116 39 1 4.4133 -1.3611 0.0084 40 1 1.6598 -2.8705 -1.0364 41 1 0.5333 -2.3145 1.5810 42 1 2.5407 -5.0163 0.8777 43 1 4.3312 -3.5104 0.2114 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:48 Heat of formation + Delta-G solvation = 97.147932 kcal Electronic energy + Delta-G solvation = -25738.648102 eV Core-core repulsion = 21982.400689 eV Total energy + Delta-G solvation = -3756.247413 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.61077 -42.04030 -40.91739 -39.25281 -37.86952 -35.30651 -33.94186 -33.38526 -31.39051 -30.91965 -28.66061 -27.49320 -26.90913 -26.81548 -24.32723 -22.94422 -22.04598 -21.68173 -21.37578 -20.87893 -20.21240 -18.83573 -18.32502 -18.05792 -17.36362 -16.89813 -16.46613 -16.35985 -16.09291 -15.87371 -15.50748 -15.27437 -15.05576 -14.89922 -14.55884 -14.50824 -14.41402 -14.17951 -13.76304 -13.70095 -13.65516 -13.42354 -13.17392 -13.00415 -12.95057 -12.34880 -12.22094 -12.04203 -11.96334 -11.59097 -11.47742 -11.03806 -10.67861 -10.27887 -10.14003 -9.75421 -9.44900 -9.10795 -5.07441 0.39446 1.03080 1.08145 1.45812 1.59003 1.65774 1.69119 1.95273 2.02005 2.35239 2.36968 3.13165 3.26075 3.34857 3.41808 3.51082 3.63208 3.72941 3.84270 3.95994 3.99393 4.05030 4.24417 4.29209 4.33979 4.36216 4.42266 4.46843 4.50688 4.57523 4.61354 4.75358 4.81498 4.86973 4.90319 4.93187 4.96783 5.09980 5.16338 5.18022 5.43874 5.68376 5.79440 5.96449 6.12169 6.12660 6.29279 6.44068 6.84273 7.15694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.389 5.389 3 C -0.053 4.053 4 C 0.592 3.408 5 O -0.545 6.545 6 N -0.709 5.709 7 C 0.129 3.871 8 H 0.118 0.882 9 C -0.146 4.146 10 C -0.120 4.120 11 H 0.110 0.890 12 C 0.146 3.854 13 N -0.371 5.371 14 C 0.052 3.948 15 C -0.275 4.275 16 C 0.044 3.956 17 N -0.295 5.295 18 C -0.137 4.137 19 C -0.135 4.135 20 C -0.205 4.205 21 C 0.015 3.985 22 C -0.050 4.050 23 O -0.542 6.542 24 Si 0.724 3.276 25 H 0.072 0.928 26 H 0.104 0.896 27 H 0.105 0.895 28 H 0.404 0.596 29 H 0.074 0.926 30 H 0.087 0.913 31 H 0.097 0.903 32 H 0.087 0.913 33 H 0.172 0.828 34 H 0.147 0.853 35 H 0.183 0.817 36 H 0.091 0.909 37 H 0.083 0.917 38 H 0.145 0.855 39 H 0.147 0.853 40 H 0.119 0.881 41 H 0.381 0.619 42 H -0.253 1.253 43 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.979 -1.153 2.897 5.875 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.061 5.061 3 C -0.167 4.167 4 C 0.380 3.620 5 O -0.424 6.424 6 N -0.360 5.360 7 C 0.024 3.976 8 H 0.136 0.864 9 C -0.184 4.184 10 C -0.140 4.140 11 H 0.128 0.872 12 C 0.024 3.976 13 N -0.153 5.153 14 C -0.094 4.094 15 C -0.304 4.304 16 C -0.142 4.142 17 N -0.117 5.117 18 C -0.176 4.176 19 C -0.162 4.162 20 C -0.229 4.229 21 C -0.103 4.103 22 C -0.160 4.160 23 O -0.347 6.347 24 Si 0.623 3.377 25 H 0.090 0.910 26 H 0.122 0.878 27 H 0.123 0.877 28 H 0.239 0.761 29 H 0.093 0.907 30 H 0.105 0.895 31 H 0.115 0.885 32 H 0.106 0.894 33 H 0.189 0.811 34 H 0.165 0.835 35 H 0.199 0.801 36 H 0.110 0.890 37 H 0.102 0.898 38 H 0.163 0.837 39 H 0.165 0.835 40 H 0.137 0.863 41 H 0.229 0.771 42 H -0.177 1.177 43 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 3.767 -2.197 0.985 4.471 hybrid contribution 0.532 0.480 0.276 0.768 sum 4.298 -1.717 1.262 4.798 Atomic orbital electron populations 1.22662 0.75451 1.06544 1.04398 1.43777 1.07044 1.03955 1.51338 1.20041 0.90540 0.87512 1.18627 1.17029 0.85616 0.83574 0.75736 1.90793 1.16350 1.84774 1.50433 1.45598 1.09649 1.05789 1.74939 1.22470 0.99790 0.78399 0.96899 0.86443 1.23565 1.02684 0.95111 0.97076 1.22702 0.98932 0.95013 0.97328 0.87198 1.21731 0.95814 0.86541 0.93476 1.48705 1.32016 1.24250 1.10357 1.22581 1.00946 0.99439 0.86450 1.21556 1.04657 1.01904 1.02320 1.23933 0.99702 0.99524 0.91048 1.77339 1.08740 1.01853 1.23754 1.23382 0.99847 0.94949 0.99395 1.21263 0.94335 0.95164 1.05389 1.20640 0.95069 0.95422 1.11728 1.21088 0.90950 0.89241 1.09069 1.24995 0.93834 0.94617 1.02566 1.86494 1.30018 1.88863 1.29374 0.94010 0.76358 0.77663 0.89640 0.90956 0.87814 0.87705 0.76094 0.90700 0.89484 0.88500 0.89437 0.81085 0.83548 0.80054 0.89006 0.89829 0.83686 0.83539 0.86343 0.77090 1.17739 1.17607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.06 10.30 59.85 0.62 0.67 16 2 N -0.39 -0.72 3.16 -115.62 -0.37 -1.08 16 3 C -0.05 -0.10 6.89 -81.98 -0.56 -0.67 16 4 C 0.59 1.48 7.77 -12.85 -0.10 1.38 16 5 O -0.54 -3.12 14.18 5.19 0.07 -3.05 16 6 N -0.71 0.58 5.34 -54.32 -0.29 0.29 16 7 C 0.13 -0.12 4.21 -67.12 -0.28 -0.40 16 8 H 0.12 0.14 7.53 -51.93 -0.39 -0.25 16 9 C -0.15 0.18 7.43 -25.91 -0.19 -0.01 16 10 C -0.12 0.21 3.86 -89.81 -0.35 -0.14 16 11 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 12 C 0.15 -0.29 6.35 -4.04 -0.03 -0.32 16 13 N -0.37 -0.41 3.68 -61.37 -0.23 -0.63 16 14 C 0.05 0.01 11.45 -17.22 -0.20 -0.19 16 15 C -0.27 -0.27 10.80 -40.01 -0.43 -0.70 16 16 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 17 N -0.30 -1.04 12.28 30.63 0.38 -0.67 16 18 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 19 C -0.14 0.00 10.36 -39.12 -0.41 -0.41 16 20 C -0.20 -0.04 9.37 -39.98 -0.37 -0.41 16 21 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 22 C -0.05 0.04 2.99 36.01 0.11 0.15 16 23 O -0.54 0.52 10.11 -35.23 -0.36 0.16 16 24 Si 0.72 -1.52 31.29 -169.99 -5.32 -6.84 16 25 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 26 H 0.10 -0.07 5.24 -51.92 -0.27 -0.34 16 27 H 0.10 0.27 5.92 -51.93 -0.31 -0.04 16 28 H 0.40 -1.40 7.63 -40.82 -0.31 -1.71 16 29 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 30 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 31 H 0.10 -0.43 7.78 -51.93 -0.40 -0.84 16 32 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.17 -0.54 8.06 -52.49 -0.42 -0.96 16 34 H 0.15 -0.12 8.06 -52.49 -0.42 -0.54 16 35 H 0.18 -0.09 8.06 -52.49 -0.42 -0.52 16 36 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 38 H 0.15 -0.43 7.45 -52.49 -0.39 -0.82 16 39 H 0.15 -0.17 6.62 -52.49 -0.35 -0.52 16 40 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 41 H 0.38 -1.66 8.29 45.56 0.38 -1.29 16 42 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 43 H -0.25 0.04 6.76 56.52 0.38 0.42 16 LS Contribution 356.36 15.07 5.37 5.37 Total: 0.00 -9.64 356.36 -9.72 -19.35 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -5.88 Total: -11.49 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -3.10 Total: -1.42 kcal Atomic # 7 Polarization: -1.59 SS G_CDS: -0.51 Total: -2.09 kcal Atomic # 8 Polarization: -2.60 SS G_CDS: -0.28 Total: -2.88 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.32 Total: -6.84 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.64 -9.72 -19.35 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.502 kcal (2) G-P(sol) polarization free energy of solvation -9.636 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.866 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.718 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.354 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds