Wall clock time and date at job start Sun Mar 7 2021 02:32:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86297 * 109.47305 * 2 1 4 4 C 1.50703 * 109.46858 * 239.99418 * 2 1 3 5 5 C 1.36444 * 120.29285 * 240.00169 * 4 2 1 6 6 C 1.40096 * 119.25295 * 179.97438 * 5 4 2 7 7 C 1.40849 * 132.86861 * 180.02562 * 6 5 4 8 8 C 1.46565 * 126.58288 * 359.96102 * 7 6 5 9 9 O 1.21727 * 119.99322 * 359.71090 * 8 7 6 10 10 N 1.34774 * 120.00668 * 179.71007 * 8 7 6 11 11 C 1.46496 * 120.00099 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.91109 * 23.75176 * 11 10 8 13 13 C 1.53787 * 113.61210 * 155.00440 * 11 10 8 14 14 C 1.53779 * 87.07963 * 139.97940 * 13 11 10 15 15 H 1.09006 * 113.61280 * 89.11401 * 14 13 11 16 16 C 1.53003 * 113.61005 * 219.93029 * 14 13 11 17 17 N 1.46503 * 109.46622 * 185.00145 * 16 14 13 18 18 C 1.34948 * 126.03715 * 125.00507 * 17 16 14 19 19 C 1.35319 * 107.74964 * 179.97438 * 18 17 16 20 20 C 1.39876 * 107.91600 * 359.97438 * 19 18 17 21 21 N 1.30835 * 108.20298 * 359.74571 * 20 19 18 22 22 C 1.53779 * 87.08402 * 334.56577 * 14 13 11 23 23 C 1.40557 * 106.84364 * 179.69628 * 7 6 5 24 24 N 1.30746 * 108.73998 * 0.26617 * 23 7 6 25 25 N 1.36584 * 120.22758 * 0.17511 * 6 5 4 26 26 C 1.36240 * 120.08301 * 0.06950 * 25 6 5 27 27 C 1.35195 * 120.70116 * 359.49968 * 26 25 6 28 28 H 0.96696 * 113.99601 * 300.00607 * 1 2 3 29 29 H 1.09003 * 109.46622 * 119.99662 * 2 1 3 30 30 H 1.48504 * 109.99853 * 178.68130 * 3 2 1 31 31 H 1.48500 * 109.99813 * 299.99443 * 3 2 1 32 32 H 1.07995 * 120.38002 * 359.95642 * 5 4 2 33 33 H 0.97002 * 119.99411 * 0.02562 * 10 8 7 34 34 H 1.08997 * 113.61028 * 254.52900 * 13 11 10 35 35 H 1.09000 * 113.61529 * 25.43039 * 13 11 10 36 36 H 1.08996 * 109.47332 * 305.00226 * 16 14 13 37 37 H 1.08996 * 109.47070 * 65.00843 * 16 14 13 38 38 H 1.07999 * 126.12413 * 359.95708 * 18 17 16 39 39 H 1.07998 * 126.04076 * 179.97438 * 19 18 17 40 40 H 1.07998 * 125.89611 * 179.97438 * 20 19 18 41 41 H 1.09002 * 113.61557 * 270.88569 * 22 14 13 42 42 H 1.09004 * 113.61501 * 139.97990 * 22 14 13 43 43 H 1.07997 * 125.63247 * 180.26208 * 23 7 6 44 44 H 1.08000 * 119.64755 * 180.29701 * 26 25 6 45 45 H 1.07997 * 119.83630 * 180.22933 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7106 -1.2304 5 6 2.7161 -1.8205 -1.1121 6 6 3.1705 -2.4643 -2.2704 7 6 3.9739 -3.6016 -2.4820 8 6 4.5751 -4.4508 -1.4497 9 8 4.4011 -4.1934 -0.2728 10 7 5.3204 -5.5165 -1.8034 11 6 5.9217 -6.3648 -0.7715 12 1 5.3958 -6.3109 0.1816 13 6 6.2000 -7.8025 -1.2411 14 6 7.5201 -7.7194 -0.4567 15 1 7.4310 -8.0359 0.5826 16 6 8.7028 -8.3703 -1.1767 17 7 9.8792 -8.3459 -0.3038 18 6 10.6194 -9.4137 0.0609 19 6 11.6115 -8.9716 0.8681 20 6 11.4731 -7.5860 1.0006 21 7 10.4385 -7.2092 0.2939 22 6 7.4449 -6.1951 -0.6450 23 6 4.0835 -3.7698 -3.8732 24 7 3.4123 -2.8169 -4.4656 25 7 2.8329 -1.9816 -3.5027 26 6 2.0530 -0.8698 -3.6106 27 6 1.5960 -0.2375 -2.5064 28 1 -0.3932 0.4418 0.7650 29 1 1.7923 -0.5138 0.8901 30 1 3.5347 1.7701 0.0321 31 1 1.5617 2.4678 -1.2086 32 1 2.9842 -2.1983 -0.1366 33 1 5.4593 -5.7213 -2.7414 34 1 5.4997 -8.5357 -0.8410 35 1 6.3374 -7.8910 -2.3188 36 1 8.4546 -9.4026 -1.4232 37 1 8.9184 -7.8198 -2.0923 38 1 10.4501 -10.4377 -0.2376 39 1 12.3751 -9.5809 1.3285 40 1 12.1123 -6.9386 1.5826 41 1 7.9226 -5.8441 -1.5598 42 1 7.7497 -5.6306 0.2363 43 1 4.6316 -4.5561 -4.3707 44 1 1.7863 -0.4970 -4.5885 45 1 0.9757 0.6407 -2.6081 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:52 Heat of formation + Delta-G solvation = 153.253971 kcal Electronic energy + Delta-G solvation = -29741.197187 eV Core-core repulsion = 25537.278382 eV Total energy + Delta-G solvation = -4203.918805 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.29531 -42.01208 -40.89849 -39.42569 -38.96321 -37.32503 -35.01941 -34.27044 -33.43332 -32.16814 -30.93118 -30.35242 -28.50859 -27.27979 -26.75373 -25.26195 -24.32789 -23.29786 -22.78512 -21.89060 -21.47074 -21.30515 -20.60098 -19.14104 -18.46175 -18.30206 -17.93293 -17.53346 -17.04847 -16.89865 -16.72632 -16.48263 -15.86756 -15.70306 -15.61268 -15.48452 -15.18807 -14.85619 -14.78479 -14.58539 -14.30456 -13.96988 -13.90288 -13.59029 -13.54023 -13.40687 -13.33292 -13.06940 -12.92154 -12.62206 -12.23528 -12.07543 -11.92915 -11.87468 -11.59074 -11.53558 -11.34678 -10.78299 -10.73321 -10.28860 -10.26174 -9.94519 -9.44019 -8.77392 -5.16077 -0.57679 -0.13437 0.99237 1.05603 1.06039 1.13358 1.52995 1.62161 1.86150 2.01814 2.04092 2.28931 2.57913 2.96857 3.11428 3.26034 3.39747 3.42208 3.60042 3.61952 3.67732 3.76076 3.84098 3.96895 3.97793 3.99232 4.10214 4.15289 4.23334 4.24080 4.29724 4.35691 4.51356 4.60672 4.66709 4.69514 4.76513 4.79583 4.91605 4.96846 5.07482 5.13178 5.13844 5.18585 5.22407 5.28137 5.62161 5.63899 5.81743 6.14384 6.30472 6.45447 6.62546 6.87389 7.40725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.073 4.073 3 Si 0.703 3.297 4 C -0.031 4.031 5 C -0.093 4.093 6 C 0.167 3.833 7 C -0.315 4.315 8 C 0.603 3.397 9 O -0.549 6.549 10 N -0.718 5.718 11 C 0.127 3.873 12 H 0.117 0.883 13 C -0.138 4.138 14 C -0.119 4.119 15 H 0.099 0.901 16 C 0.145 3.855 17 N -0.372 5.372 18 C 0.050 3.950 19 C -0.275 4.275 20 C 0.041 3.959 21 N -0.289 5.289 22 C -0.134 4.134 23 C 0.119 3.881 24 N -0.312 5.312 25 N -0.265 5.265 26 C 0.113 3.887 27 C -0.145 4.145 28 H 0.388 0.612 29 H 0.083 0.917 30 H -0.255 1.255 31 H -0.249 1.249 32 H 0.165 0.835 33 H 0.398 0.602 34 H 0.081 0.919 35 H 0.090 0.910 36 H 0.098 0.902 37 H 0.086 0.914 38 H 0.172 0.828 39 H 0.146 0.854 40 H 0.182 0.818 41 H 0.085 0.915 42 H 0.077 0.923 43 H 0.199 0.801 44 H 0.178 0.822 45 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.393 -0.434 0.257 1.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.183 4.183 3 Si 0.602 3.398 4 C -0.036 4.036 5 C -0.112 4.112 6 C 0.047 3.953 7 C -0.330 4.330 8 C 0.392 3.608 9 O -0.428 6.428 10 N -0.369 5.369 11 C 0.022 3.978 12 H 0.135 0.865 13 C -0.177 4.177 14 C -0.138 4.138 15 H 0.118 0.882 16 C 0.024 3.976 17 N -0.155 5.155 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.145 4.145 21 N -0.110 5.110 22 C -0.173 4.173 23 C -0.062 4.062 24 N -0.132 5.132 25 N -0.029 5.029 26 C -0.013 4.013 27 C -0.167 4.167 28 H 0.236 0.764 29 H 0.101 0.899 30 H -0.180 1.180 31 H -0.173 1.173 32 H 0.183 0.817 33 H 0.233 0.767 34 H 0.099 0.901 35 H 0.109 0.891 36 H 0.116 0.884 37 H 0.104 0.896 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.199 0.801 41 H 0.104 0.896 42 H 0.095 0.905 43 H 0.216 0.784 44 H 0.196 0.804 45 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -2.090 1.413 -1.602 2.989 hybrid contribution 0.984 -1.846 0.247 2.106 sum -1.107 -0.433 -1.356 1.803 Atomic orbital electron populations 1.86475 1.16453 1.81975 1.50032 1.24702 0.86345 1.10588 0.96626 0.95327 0.81390 0.75537 0.87546 1.19442 0.95948 0.93797 0.94412 1.20707 0.98265 0.93919 0.98347 1.19241 0.95740 0.94280 0.86086 1.19625 1.16064 1.03682 0.93624 1.16849 0.77119 0.79579 0.87267 1.90781 1.61666 1.71753 1.18584 1.45650 1.52867 1.28637 1.09702 1.22470 0.93371 0.88940 0.93061 0.86500 1.23390 0.96435 0.96975 1.00900 1.22627 0.93321 0.97349 1.00536 0.88237 1.21742 0.81560 1.02726 0.91616 1.48742 1.23404 1.04740 1.38588 1.22604 0.93919 0.93919 0.99175 1.21557 1.04540 0.95457 1.08865 1.23951 0.96191 0.95496 0.98858 1.77403 1.12046 1.07836 1.13743 1.23452 0.95490 0.95068 1.03282 1.24059 0.94339 0.95834 0.91933 1.77632 1.18748 1.06068 1.10783 1.46091 1.32340 1.18698 1.05803 1.21586 0.92378 0.85416 1.01878 1.20844 1.02691 1.02685 0.90445 0.76412 0.89938 1.17975 1.17270 0.81747 0.76739 0.90063 0.89121 0.88380 0.89621 0.81059 0.83580 0.80124 0.89606 0.90470 0.78441 0.80447 0.82050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.59 12.76 -35.23 -0.45 0.14 16 2 C -0.07 0.07 2.80 36.01 0.10 0.17 16 3 Si 0.70 -1.44 31.97 -169.99 -5.43 -6.87 16 4 C -0.03 -0.05 4.53 -104.55 -0.47 -0.52 16 5 C -0.09 -0.30 9.35 -39.53 -0.37 -0.67 16 6 C 0.17 0.71 6.76 -84.07 -0.57 0.14 16 7 C -0.32 -1.08 6.17 -104.68 -0.65 -1.72 16 8 C 0.60 2.27 7.78 -12.90 -0.10 2.16 16 9 O -0.55 -3.85 15.31 5.17 0.08 -3.77 16 10 N -0.72 -0.14 5.34 -54.35 -0.29 -0.43 16 11 C 0.13 0.00 4.24 -67.12 -0.28 -0.28 16 12 H 0.12 0.23 7.46 -51.93 -0.39 -0.15 16 13 C -0.14 0.38 7.39 -25.92 -0.19 0.18 16 14 C -0.12 0.16 3.83 -89.81 -0.34 -0.19 16 15 H 0.10 0.00 8.14 -51.93 -0.42 -0.43 16 16 C 0.14 -0.24 6.35 -4.04 -0.03 -0.27 16 17 N -0.37 -0.51 3.68 -61.36 -0.23 -0.74 16 18 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 19 C -0.27 -0.33 10.80 -40.01 -0.43 -0.77 16 20 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 21 N -0.29 -1.08 12.42 30.63 0.38 -0.70 16 22 C -0.13 -0.04 7.43 -25.92 -0.19 -0.23 16 23 C 0.12 0.17 11.44 -17.14 -0.20 -0.02 16 24 N -0.31 -1.13 12.57 30.75 0.39 -0.75 16 25 N -0.26 -0.95 3.86 -10.54 -0.04 -0.99 16 26 C 0.11 0.13 11.18 -16.68 -0.19 -0.06 16 27 C -0.15 -0.11 8.67 -39.95 -0.35 -0.45 16 28 H 0.39 -2.35 8.74 45.56 0.40 -1.95 16 29 H 0.08 -0.17 7.71 -51.93 -0.40 -0.57 16 30 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 31 H -0.25 -0.04 7.07 56.52 0.40 0.36 16 32 H 0.17 0.54 7.01 -52.49 -0.37 0.17 16 33 H 0.40 -1.10 7.65 -40.82 -0.31 -1.41 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 36 H 0.10 -0.40 8.07 -51.93 -0.42 -0.82 16 37 H 0.09 -0.17 7.85 -51.93 -0.41 -0.58 16 38 H 0.17 -0.50 8.06 -52.49 -0.42 -0.93 16 39 H 0.15 -0.08 8.06 -52.49 -0.42 -0.51 16 40 H 0.18 -0.03 8.06 -52.49 -0.42 -0.45 16 41 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 42 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 43 H 0.20 -0.61 7.46 -52.49 -0.39 -1.01 16 44 H 0.18 -0.33 8.06 -52.49 -0.42 -0.75 16 45 H 0.16 -0.19 7.52 -52.49 -0.39 -0.58 16 LS Contribution 386.39 15.07 5.82 5.82 Total: 0.00 -12.67 386.39 -10.10 -22.77 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -5.67 Total: -11.66 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -4.66 Total: -2.82 kcal Atomic # 7 Polarization: -3.82 SS G_CDS: 0.21 Total: -3.61 kcal Atomic # 8 Polarization: -3.27 SS G_CDS: -0.37 Total: -3.64 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.43 Total: -6.87 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -12.67 -10.10 -22.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 176.026 kcal (2) G-P(sol) polarization free energy of solvation -12.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 163.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.772 kcal (6) G-S(sol) free energy of system = (1) + (5) 153.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds