Wall clock time and date at job start Sun Mar 7 2021 02:32:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35453 * 125.56389 * 2 1 4 4 C 1.50704 * 126.06700 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47139 * 332.00415 * 4 3 2 6 6 Si 1.86295 * 109.47190 * 211.99872 * 4 3 2 7 7 C 1.39826 * 107.86424 * 180.02562 * 3 2 1 8 8 C 1.50709 * 126.45837 * 180.02562 * 7 3 2 9 9 C 1.37871 * 107.08764 * 0.02562 * 7 3 2 10 10 C 1.46680 * 126.23386 * 179.97438 * 9 7 3 11 11 O 1.21689 * 120.00170 * 0.02562 * 10 9 7 12 12 N 1.34775 * 119.99873 * 180.02562 * 10 9 7 13 13 C 1.46502 * 119.99988 * 179.72531 * 12 10 9 14 14 H 1.08998 * 112.84614 * 334.94471 * 13 12 10 15 15 C 1.53778 * 113.61270 * 106.14029 * 13 12 10 16 16 C 1.53954 * 87.02120 * 139.95263 * 15 13 12 17 17 H 1.08999 * 113.53598 * 89.18542 * 16 15 13 18 18 C 1.52996 * 113.74605 * 220.05668 * 16 15 13 19 19 N 1.46499 * 109.47254 * 272.59657 * 18 16 15 20 20 C 1.34951 * 126.03837 * 124.99899 * 19 18 16 21 21 C 1.35317 * 107.74579 * 179.97438 * 20 19 18 22 22 C 1.39865 * 107.92057 * 359.97438 * 21 20 19 23 23 N 1.30835 * 108.20336 * 359.74516 * 22 21 20 24 24 C 1.53777 * 87.11035 * 334.63838 * 16 15 13 25 25 N 1.35530 * 125.56511 * 180.31981 * 2 1 3 26 26 H 1.09004 * 109.47145 * 84.54349 * 1 2 3 27 27 H 1.09001 * 109.46690 * 204.54197 * 1 2 3 28 28 H 1.09001 * 109.46952 * 324.54218 * 1 2 3 29 29 H 1.09005 * 109.46805 * 91.99770 * 4 3 2 30 30 H 0.96703 * 113.99653 * 300.00344 * 5 4 3 31 31 H 1.48503 * 109.99865 * 58.68261 * 6 4 3 32 32 H 1.48500 * 110.00258 * 179.97438 * 6 4 3 33 33 H 1.08998 * 109.46726 * 269.98425 * 8 7 3 34 34 H 1.09003 * 109.46629 * 29.98177 * 8 7 3 35 35 H 1.08994 * 109.47333 * 149.98615 * 8 7 3 36 36 H 0.97004 * 120.00366 * 0.02562 * 12 10 9 37 37 H 1.08998 * 113.61709 * 254.53210 * 15 13 12 38 38 H 1.09004 * 113.61482 * 25.43392 * 15 13 12 39 39 H 1.09001 * 109.46954 * 32.59391 * 18 16 15 40 40 H 1.09006 * 109.47357 * 152.59556 * 18 16 15 41 41 H 1.07995 * 126.12291 * 359.95548 * 20 19 18 42 42 H 1.08000 * 126.03703 * 180.02562 * 21 20 19 43 43 H 1.08003 * 125.89843 * 180.02562 * 22 21 20 44 44 H 1.08999 * 113.61428 * 270.81468 * 24 16 15 45 45 H 1.09003 * 113.69651 * 139.91933 * 24 16 15 46 46 H 0.97007 * 125.67851 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 0.0005 5 8 0.5406 2.6094 -0.6314 6 14 3.0375 3.5911 -0.9303 7 6 3.6269 0.6768 -0.0006 8 6 4.8486 1.5592 -0.0003 9 6 3.6122 -0.7019 -0.0015 10 6 4.7860 -1.5815 -0.0029 11 8 5.9049 -1.1030 -0.0029 12 7 4.6253 -2.9196 -0.0043 13 6 5.7977 -3.7981 -0.0118 14 1 6.6798 -3.3230 -0.4409 15 6 6.0627 -4.4832 1.3393 16 6 6.4168 -5.7486 0.5371 17 1 7.4691 -5.8073 0.2590 18 6 5.8952 -7.0424 1.1654 19 7 6.8766 -7.5478 2.1285 20 6 6.6411 -7.8335 3.4263 21 6 7.8003 -8.2727 3.9689 22 6 8.7775 -8.2555 2.9684 23 7 8.2236 -7.8267 1.8634 24 6 5.5143 -5.1987 -0.5800 25 7 2.2953 -1.1025 -0.0062 26 1 -0.3633 0.0977 -1.0230 27 1 -0.3633 -0.9349 0.4269 28 1 -0.3633 0.8371 0.5962 29 1 1.7398 2.8879 1.0278 30 1 0.5369 2.3078 -1.5502 31 1 3.1796 3.0967 -2.3234 32 1 2.5803 5.0040 -0.9376 33 1 5.1430 1.7724 -1.0279 34 1 4.6219 2.4932 0.5140 35 1 5.6643 1.0503 0.5132 36 1 3.7334 -3.3011 -0.0047 37 1 6.9063 -4.0607 1.8850 38 1 5.1704 -4.5925 1.9558 39 1 4.9533 -6.8439 1.6767 40 1 5.7354 -7.7866 0.3851 41 1 5.6967 -7.7297 3.9398 42 1 7.9450 -8.5827 4.9933 43 1 9.8099 -8.5500 3.0864 44 1 4.4719 -5.5040 -0.4891 45 1 5.9146 -5.3525 -1.5821 46 1 1.9834 -2.0210 -0.0109 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:56 Heat of formation + Delta-G solvation = 80.149794 kcal Electronic energy + Delta-G solvation = -27811.661304 eV Core-core repulsion = 23899.139177 eV Total energy + Delta-G solvation = -3912.522127 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.168 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.70658 -42.07386 -40.95486 -39.28996 -37.80766 -35.35141 -34.13697 -33.58759 -32.45789 -30.98225 -29.33692 -28.78671 -27.53526 -26.95544 -26.38516 -24.17520 -22.39339 -22.07801 -21.59366 -21.06394 -20.67720 -20.11075 -19.27200 -18.34595 -17.78873 -17.34220 -16.81136 -16.57585 -16.28425 -16.21928 -15.71713 -15.37560 -15.24670 -15.05685 -14.89886 -14.59356 -14.40465 -14.26496 -14.07146 -13.85969 -13.79187 -13.70097 -13.53446 -13.44882 -13.28088 -13.25770 -12.98335 -12.66851 -12.38913 -12.22874 -12.01650 -11.73863 -11.63822 -11.51148 -10.95914 -10.67798 -10.31641 -10.20793 -9.52628 -9.48110 -8.99788 -4.65659 0.38203 0.99741 1.26011 1.55120 1.70527 1.77998 1.92025 1.99167 2.01409 2.14629 2.32593 3.19705 3.29420 3.36517 3.38854 3.57689 3.73050 3.78174 3.80379 3.92140 3.95116 3.99796 4.12325 4.20469 4.31410 4.35584 4.39087 4.47206 4.52820 4.53950 4.57687 4.71191 4.73426 4.78955 4.84451 4.86053 4.89559 4.92057 4.97339 5.07572 5.13225 5.14232 5.33736 5.40171 5.69969 5.76459 5.85836 6.08523 6.24364 6.40375 6.50721 6.81062 7.11283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.082 3.918 3 C -0.211 4.211 4 C -0.034 4.034 5 O -0.534 6.534 6 Si 0.662 3.338 7 C -0.059 4.059 8 C -0.101 4.101 9 C -0.062 4.062 10 C 0.592 3.408 11 O -0.520 6.520 12 N -0.724 5.724 13 C 0.128 3.872 14 H 0.121 0.879 15 C -0.146 4.146 16 C -0.120 4.120 17 H 0.111 0.889 18 C 0.146 3.854 19 N -0.371 5.371 20 C 0.051 3.949 21 C -0.274 4.274 22 C 0.045 3.955 23 N -0.295 5.295 24 C -0.138 4.138 25 N -0.539 5.539 26 H 0.076 0.924 27 H 0.061 0.939 28 H 0.096 0.904 29 H 0.113 0.887 30 H 0.373 0.627 31 H -0.262 1.262 32 H -0.257 1.257 33 H 0.077 0.923 34 H 0.080 0.920 35 H 0.097 0.903 36 H 0.393 0.607 37 H 0.076 0.924 38 H 0.084 0.916 39 H 0.095 0.905 40 H 0.087 0.913 41 H 0.171 0.829 42 H 0.147 0.853 43 H 0.183 0.817 44 H 0.088 0.912 45 H 0.083 0.917 46 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.960 -3.460 1.299 5.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.036 4.036 3 C -0.218 4.218 4 C -0.145 4.145 5 O -0.340 6.340 6 Si 0.564 3.436 7 C -0.067 4.067 8 C -0.156 4.156 9 C -0.173 4.173 10 C 0.381 3.619 11 O -0.396 6.396 12 N -0.375 5.375 13 C 0.024 3.976 14 H 0.138 0.862 15 C -0.184 4.184 16 C -0.139 4.139 17 H 0.129 0.871 18 C 0.025 3.975 19 N -0.154 5.154 20 C -0.095 4.095 21 C -0.304 4.304 22 C -0.141 4.141 23 N -0.116 5.116 24 C -0.177 4.177 25 N -0.136 5.136 26 H 0.095 0.905 27 H 0.080 0.920 28 H 0.115 0.885 29 H 0.131 0.869 30 H 0.220 0.780 31 H -0.186 1.186 32 H -0.182 1.182 33 H 0.096 0.904 34 H 0.098 0.902 35 H 0.115 0.885 36 H 0.227 0.773 37 H 0.095 0.905 38 H 0.103 0.897 39 H 0.113 0.887 40 H 0.105 0.895 41 H 0.189 0.811 42 H 0.165 0.835 43 H 0.200 0.800 44 H 0.107 0.893 45 H 0.102 0.898 46 H 0.251 0.749 Dipole moment (debyes) X Y Z Total from point charges -3.101 -2.188 -0.147 3.798 hybrid contribution -1.770 -1.613 0.312 2.415 sum -4.871 -3.801 0.165 6.180 Atomic orbital electron populations 1.20509 0.86973 1.03564 1.03596 1.20341 0.93770 0.85270 1.04179 1.19551 0.92482 0.95100 1.14637 1.24187 0.91253 0.95958 1.03063 1.86550 1.29295 1.88133 1.30001 0.94762 0.88155 0.78208 0.82517 1.19701 0.94557 0.91212 1.01268 1.20379 0.94909 0.97156 1.03196 1.20021 0.82804 0.93921 1.20594 1.17041 0.87554 0.81324 0.76003 1.90838 1.24117 1.74889 1.49760 1.45862 1.09357 1.05810 1.76440 1.22472 0.89791 0.88451 0.96911 0.86161 1.23587 1.02322 0.95460 0.97077 1.22730 1.01677 0.92679 0.96825 0.87099 1.21714 0.88765 0.95646 0.91397 1.48696 1.08248 1.50383 1.08058 1.22574 1.00707 1.00699 0.85487 1.21560 0.92745 1.14339 1.01716 1.23938 1.00530 0.99161 0.90511 1.77342 0.89030 1.21605 1.23659 1.23369 1.00406 0.94568 0.99313 1.41848 1.05418 1.08330 1.58003 0.90501 0.91995 0.88538 0.86905 0.78014 1.18597 1.18182 0.90447 0.90214 0.88480 0.77320 0.90546 0.89729 0.88653 0.89465 0.81141 0.83521 0.80003 0.89328 0.89782 0.74864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.21 9.01 36.01 0.32 0.53 16 2 C 0.08 -0.04 7.08 -81.95 -0.58 -0.62 16 3 C -0.21 -0.17 5.34 -105.02 -0.56 -0.73 16 4 C -0.03 -0.01 2.98 36.01 0.11 0.09 16 5 O -0.53 -0.32 10.43 -35.23 -0.37 -0.69 16 6 Si 0.66 0.42 27.21 -169.99 -4.63 -4.21 16 7 C -0.06 -0.09 5.88 -104.16 -0.61 -0.70 16 8 C -0.10 -0.05 7.67 36.01 0.28 0.23 16 9 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 10 C 0.59 0.98 7.79 -12.85 -0.10 0.88 16 11 O -0.52 -2.57 14.42 5.20 0.07 -2.49 16 12 N -0.72 1.20 5.36 -54.32 -0.29 0.91 16 13 C 0.13 -0.18 4.22 -67.12 -0.28 -0.47 16 14 H 0.12 0.08 7.50 -51.93 -0.39 -0.31 16 15 C -0.15 0.23 7.45 -25.83 -0.19 0.04 16 16 C -0.12 0.24 3.86 -89.72 -0.35 -0.10 16 17 H 0.11 0.02 7.97 -51.93 -0.41 -0.40 16 18 C 0.15 -0.33 6.35 -4.04 -0.03 -0.35 16 19 N -0.37 -0.34 3.68 -61.37 -0.23 -0.56 16 20 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 21 C -0.27 -0.23 10.80 -40.01 -0.43 -0.66 16 22 C 0.04 0.08 12.02 -17.37 -0.21 -0.13 16 23 N -0.29 -0.98 12.28 30.62 0.38 -0.60 16 24 C -0.14 0.49 7.39 -25.92 -0.19 0.29 16 25 N -0.54 0.85 5.99 -5.70 -0.03 0.82 16 26 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 27 H 0.06 -0.23 8.14 -51.93 -0.42 -0.65 16 28 H 0.10 -0.12 7.18 -51.93 -0.37 -0.50 16 29 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 30 H 0.37 -0.64 8.69 45.56 0.40 -0.25 16 31 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 32 H -0.26 -0.90 7.11 56.52 0.40 -0.50 16 33 H 0.08 0.02 7.29 -51.93 -0.38 -0.36 16 34 H 0.08 -0.15 5.52 -51.93 -0.29 -0.43 16 35 H 0.10 0.17 6.49 -51.93 -0.34 -0.17 16 36 H 0.39 -1.78 7.84 -40.82 -0.32 -2.10 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.08 -0.21 7.91 -51.93 -0.41 -0.63 16 39 H 0.10 -0.44 7.79 -51.93 -0.40 -0.85 16 40 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 41 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 42 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 43 H 0.18 -0.13 8.06 -52.48 -0.42 -0.55 16 44 H 0.09 -0.47 8.07 -51.93 -0.42 -0.89 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.41 -1.97 8.19 -40.82 -0.33 -2.31 16 LS Contribution 373.21 15.07 5.62 5.62 Total: 0.00 -9.68 373.21 -9.73 -19.42 By element: Atomic # 1 Polarization: -9.01 SS G_CDS: -6.66 Total: -15.68 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -3.60 Total: -2.53 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.17 Total: 0.56 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.29 Total: -3.18 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: -4.63 Total: -4.21 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -9.68 -9.73 -19.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.568 kcal (2) G-P(sol) polarization free energy of solvation -9.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.884 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.735 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.419 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds