Wall clock time and date at job start Sun Mar 7 2021 02:32:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35453 * 125.56389 * 2 1 4 4 C 1.50704 * 126.06700 * 0.02562 * 3 2 1 5 5 O 1.42898 * 109.47139 * 332.00415 * 4 3 2 6 6 Si 1.86295 * 109.47190 * 211.99872 * 4 3 2 7 7 C 1.39826 * 107.86424 * 180.02562 * 3 2 1 8 8 C 1.50709 * 126.45837 * 180.02562 * 7 3 2 9 9 C 1.37871 * 107.08764 * 0.02562 * 7 3 2 10 10 C 1.46680 * 126.23386 * 179.97438 * 9 7 3 11 11 O 1.21689 * 120.00170 * 0.02562 * 10 9 7 12 12 N 1.34775 * 119.99873 * 180.02562 * 10 9 7 13 13 C 1.46502 * 119.99988 * 179.72531 * 12 10 9 14 14 H 1.08998 * 112.84614 * 334.94471 * 13 12 10 15 15 C 1.53778 * 113.61270 * 106.14029 * 13 12 10 16 16 C 1.53954 * 87.02120 * 139.95263 * 15 13 12 17 17 H 1.08999 * 113.53598 * 89.18542 * 16 15 13 18 18 C 1.52996 * 113.74605 * 220.05668 * 16 15 13 19 19 N 1.46499 * 109.47254 * 272.59657 * 18 16 15 20 20 C 1.34951 * 126.03837 * 124.99899 * 19 18 16 21 21 C 1.35317 * 107.74579 * 179.97438 * 20 19 18 22 22 C 1.39865 * 107.92057 * 359.97438 * 21 20 19 23 23 N 1.30835 * 108.20336 * 359.74516 * 22 21 20 24 24 C 1.53777 * 87.11035 * 334.63838 * 16 15 13 25 25 N 1.35530 * 125.56511 * 180.31981 * 2 1 3 26 26 H 1.09004 * 109.47145 * 84.54349 * 1 2 3 27 27 H 1.09001 * 109.46690 * 204.54197 * 1 2 3 28 28 H 1.09001 * 109.46952 * 324.54218 * 1 2 3 29 29 H 1.09005 * 109.46805 * 91.99770 * 4 3 2 30 30 H 0.96703 * 113.99653 * 300.00344 * 5 4 3 31 31 H 1.48503 * 109.99865 * 58.68261 * 6 4 3 32 32 H 1.48500 * 110.00258 * 179.97438 * 6 4 3 33 33 H 1.08998 * 109.46726 * 269.98425 * 8 7 3 34 34 H 1.09003 * 109.46629 * 29.98177 * 8 7 3 35 35 H 1.08994 * 109.47333 * 149.98615 * 8 7 3 36 36 H 0.97004 * 120.00366 * 0.02562 * 12 10 9 37 37 H 1.08998 * 113.61709 * 254.53210 * 15 13 12 38 38 H 1.09004 * 113.61482 * 25.43392 * 15 13 12 39 39 H 1.09001 * 109.46954 * 32.59391 * 18 16 15 40 40 H 1.09006 * 109.47357 * 152.59556 * 18 16 15 41 41 H 1.07995 * 126.12291 * 359.95548 * 20 19 18 42 42 H 1.08000 * 126.03703 * 180.02562 * 21 20 19 43 43 H 1.08003 * 125.89843 * 180.02562 * 22 21 20 44 44 H 1.08999 * 113.61428 * 270.81468 * 24 16 15 45 45 H 1.09003 * 113.69651 * 139.91933 * 24 16 15 46 46 H 0.97007 * 125.67851 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 0.0005 5 8 0.5406 2.6094 -0.6314 6 14 3.0375 3.5911 -0.9303 7 6 3.6269 0.6768 -0.0006 8 6 4.8486 1.5592 -0.0003 9 6 3.6122 -0.7019 -0.0015 10 6 4.7860 -1.5815 -0.0029 11 8 5.9049 -1.1030 -0.0029 12 7 4.6253 -2.9196 -0.0043 13 6 5.7977 -3.7981 -0.0118 14 1 6.6798 -3.3230 -0.4409 15 6 6.0627 -4.4832 1.3393 16 6 6.4168 -5.7486 0.5371 17 1 7.4691 -5.8073 0.2590 18 6 5.8952 -7.0424 1.1654 19 7 6.8766 -7.5478 2.1285 20 6 6.6411 -7.8335 3.4263 21 6 7.8003 -8.2727 3.9689 22 6 8.7775 -8.2555 2.9684 23 7 8.2236 -7.8267 1.8634 24 6 5.5143 -5.1987 -0.5800 25 7 2.2953 -1.1025 -0.0062 26 1 -0.3633 0.0977 -1.0230 27 1 -0.3633 -0.9349 0.4269 28 1 -0.3633 0.8371 0.5962 29 1 1.7398 2.8879 1.0278 30 1 0.5369 2.3078 -1.5502 31 1 3.1796 3.0967 -2.3234 32 1 2.5803 5.0040 -0.9376 33 1 5.1430 1.7724 -1.0279 34 1 4.6219 2.4932 0.5140 35 1 5.6643 1.0503 0.5132 36 1 3.7334 -3.3011 -0.0047 37 1 6.9063 -4.0607 1.8850 38 1 5.1704 -4.5925 1.9558 39 1 4.9533 -6.8439 1.6767 40 1 5.7354 -7.7866 0.3851 41 1 5.6967 -7.7297 3.9398 42 1 7.9450 -8.5827 4.9933 43 1 9.8099 -8.5500 3.0864 44 1 4.4719 -5.5040 -0.4891 45 1 5.9146 -5.3525 -1.5821 46 1 1.9834 -2.0210 -0.0109 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:32:56 Heat of formation + Delta-G solvation = 78.965390 kcal Electronic energy + Delta-G solvation = -27811.712663 eV Core-core repulsion = 23899.139177 eV Total energy + Delta-G solvation = -3912.573486 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.168 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.68318 -42.05467 -40.91860 -39.31781 -37.83019 -35.34584 -34.11551 -33.56884 -32.38198 -30.98620 -29.27907 -28.73511 -27.51257 -26.78925 -26.37568 -24.11072 -22.40221 -22.05100 -21.56573 -21.03326 -20.62126 -20.08113 -19.22000 -18.28853 -17.80296 -17.29459 -16.78678 -16.52756 -16.25820 -16.20043 -15.75023 -15.37876 -15.29613 -15.01795 -14.89272 -14.52783 -14.37510 -14.21633 -14.10456 -13.85497 -13.68178 -13.52612 -13.51441 -13.36159 -13.22351 -13.13961 -12.87575 -12.62866 -12.32886 -12.31132 -11.92721 -11.88385 -11.56943 -11.48518 -11.06262 -10.71058 -10.34308 -10.20032 -9.52500 -9.47991 -8.98110 -4.75408 0.35669 1.00296 1.22098 1.63233 1.66281 1.68177 1.94253 1.95445 2.01262 2.13615 2.26097 3.34670 3.41952 3.46852 3.50848 3.71007 3.81174 3.90634 3.91513 3.98729 4.08202 4.16539 4.21040 4.31903 4.43085 4.49335 4.58757 4.60075 4.63227 4.70078 4.73044 4.79234 4.80082 4.84622 4.89643 4.90964 4.94074 4.99398 5.12574 5.14755 5.16052 5.19865 5.36313 5.48694 5.72207 5.75051 5.84909 6.19253 6.37467 6.53477 6.58559 6.78104 7.09883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.090 3.910 3 C -0.228 4.228 4 C -0.027 4.027 5 O -0.541 6.541 6 Si 0.719 3.281 7 C -0.078 4.078 8 C -0.103 4.103 9 C -0.075 4.075 10 C 0.588 3.412 11 O -0.563 6.563 12 N -0.706 5.706 13 C 0.122 3.878 14 H 0.091 0.909 15 C -0.139 4.139 16 C -0.115 4.115 17 H 0.081 0.919 18 C 0.140 3.860 19 N -0.375 5.375 20 C 0.054 3.946 21 C -0.294 4.294 22 C 0.028 3.972 23 N -0.338 5.338 24 C -0.117 4.117 25 N -0.522 5.522 26 H 0.086 0.914 27 H 0.080 0.920 28 H 0.087 0.913 29 H 0.121 0.879 30 H 0.382 0.618 31 H -0.298 1.298 32 H -0.296 1.296 33 H 0.074 0.926 34 H 0.100 0.900 35 H 0.081 0.919 36 H 0.411 0.589 37 H 0.047 0.953 38 H 0.105 0.895 39 H 0.130 0.870 40 H 0.093 0.907 41 H 0.207 0.793 42 H 0.160 0.840 43 H 0.195 0.805 44 H 0.121 0.879 45 H 0.082 0.918 46 H 0.431 0.569 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.689 -4.775 1.896 8.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.030 4.030 3 C -0.234 4.234 4 C -0.139 4.139 5 O -0.348 6.348 6 Si 0.626 3.374 7 C -0.087 4.087 8 C -0.158 4.158 9 C -0.187 4.187 10 C 0.377 3.623 11 O -0.442 6.442 12 N -0.357 5.357 13 C 0.017 3.983 14 H 0.109 0.891 15 C -0.178 4.178 16 C -0.135 4.135 17 H 0.099 0.901 18 C 0.020 3.980 19 N -0.158 5.158 20 C -0.093 4.093 21 C -0.323 4.323 22 C -0.157 4.157 23 N -0.161 5.161 24 C -0.156 4.156 25 N -0.120 5.120 26 H 0.105 0.895 27 H 0.099 0.901 28 H 0.106 0.894 29 H 0.138 0.862 30 H 0.231 0.769 31 H -0.225 1.225 32 H -0.224 1.224 33 H 0.092 0.908 34 H 0.118 0.882 35 H 0.100 0.900 36 H 0.247 0.753 37 H 0.066 0.934 38 H 0.123 0.877 39 H 0.148 0.852 40 H 0.111 0.889 41 H 0.223 0.777 42 H 0.178 0.822 43 H 0.211 0.789 44 H 0.139 0.861 45 H 0.101 0.899 46 H 0.271 0.729 Dipole moment (debyes) X Y Z Total from point charges -5.850 -3.565 0.449 6.865 hybrid contribution -0.944 -1.181 0.085 1.514 sum -6.793 -4.746 0.533 8.304 Atomic orbital electron populations 1.20549 0.85324 1.04249 1.04225 1.20644 0.94666 0.85072 1.02584 1.19594 0.92385 0.95618 1.15850 1.24092 0.90788 0.95784 1.03219 1.86531 1.29213 1.88223 1.30864 0.94100 0.87597 0.75197 0.80490 1.19946 0.95118 0.91882 1.01793 1.20385 0.94442 0.97916 1.03083 1.19924 0.83523 0.93783 1.21422 1.17222 0.87161 0.82275 0.75613 1.90819 1.25695 1.75795 1.51938 1.45690 1.10248 1.04716 1.75047 1.22414 0.89142 0.89278 0.97505 0.89064 1.23558 1.02028 0.95401 0.96817 1.22549 1.00502 0.92929 0.97483 0.90083 1.22011 0.89238 0.95126 0.91607 1.48965 1.07816 1.50048 1.08958 1.23174 1.01770 0.99171 0.85140 1.21870 0.93014 1.15141 1.02313 1.24313 1.01564 0.99079 0.90747 1.77268 0.90807 1.23178 1.24837 1.23312 1.01780 0.91993 0.98510 1.41758 1.04278 1.09133 1.56878 0.89509 0.90077 0.89387 0.86154 0.76910 1.22519 1.22431 0.90756 0.88187 0.90017 0.75253 0.93398 0.87708 0.85234 0.88915 0.77665 0.82246 0.78869 0.86110 0.89921 0.72889 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.59 9.01 71.24 0.64 1.23 16 2 C 0.09 -0.22 7.08 41.34 0.29 0.08 16 3 C -0.23 -0.27 5.34 -20.12 -0.11 -0.38 16 4 C -0.03 -0.02 2.98 71.24 0.21 0.20 16 5 O -0.54 -0.33 10.43 -148.98 -1.55 -1.88 16 6 Si 0.72 1.70 27.21 68.60 1.87 3.57 16 7 C -0.08 -0.28 5.88 -19.56 -0.11 -0.40 16 8 C -0.10 -0.25 7.67 71.24 0.55 0.30 16 9 C -0.07 -0.14 7.06 40.35 0.28 0.14 16 10 C 0.59 2.38 7.79 86.45 0.67 3.05 16 11 O -0.56 -6.86 14.42 -4.31 -0.06 -6.92 16 12 N -0.71 2.70 5.36 -444.01 -2.38 0.32 16 13 C 0.12 -0.30 4.22 45.52 0.19 -0.10 16 14 H 0.09 0.35 7.50 -2.39 -0.02 0.33 16 15 C -0.14 0.42 7.45 31.18 0.23 0.65 16 16 C -0.11 0.46 3.86 -10.21 -0.04 0.42 16 17 H 0.08 0.20 7.97 -2.39 -0.02 0.18 16 18 C 0.14 -0.83 6.35 86.38 0.55 -0.28 16 19 N -0.38 -0.57 3.68 -348.06 -1.28 -1.85 16 20 C 0.05 -0.06 11.45 83.54 0.96 0.90 16 21 C -0.29 -0.51 10.80 21.99 0.24 -0.27 16 22 C 0.03 0.14 12.02 85.24 1.02 1.16 16 23 N -0.34 -2.68 12.28 -57.03 -0.70 -3.38 16 24 C -0.12 0.96 7.39 31.12 0.23 1.19 16 25 N -0.52 2.45 5.99 -171.93 -1.03 1.41 16 26 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 27 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 28 H 0.09 -0.38 7.18 -2.39 -0.02 -0.39 16 29 H 0.12 -0.11 7.96 -2.38 -0.02 -0.13 16 30 H 0.38 -1.53 8.69 -74.06 -0.64 -2.17 16 31 H -0.30 -2.50 7.11 99.48 0.71 -1.80 16 32 H -0.30 -2.62 7.11 99.48 0.71 -1.92 16 33 H 0.07 0.18 7.29 -2.39 -0.02 0.16 16 34 H 0.10 -0.28 5.52 -2.39 -0.01 -0.29 16 35 H 0.08 0.48 6.49 -2.39 -0.02 0.46 16 36 H 0.41 -4.60 7.84 -92.71 -0.73 -5.32 16 37 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 38 H 0.10 -0.74 7.91 -2.38 -0.02 -0.76 16 39 H 0.13 -1.66 7.79 -2.39 -0.02 -1.68 16 40 H 0.09 -0.62 8.14 -2.38 -0.02 -0.64 16 41 H 0.21 -1.92 8.06 -2.91 -0.02 -1.94 16 42 H 0.16 -0.33 8.06 -2.91 -0.02 -0.35 16 43 H 0.19 0.04 8.06 -2.91 -0.02 0.02 16 44 H 0.12 -1.72 8.07 -2.39 -0.02 -1.74 16 45 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 46 H 0.43 -5.19 8.19 -92.70 -0.76 -5.95 16 Total: 0.00 -26.45 373.21 -0.39 -26.84 By element: Atomic # 1 Polarization: -24.95 SS G_CDS: -1.06 Total: -26.01 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: 5.81 Total: 7.89 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -5.39 Total: -3.49 kcal Atomic # 8 Polarization: -7.19 SS G_CDS: -1.62 Total: -8.80 kcal Atomic # 14 Polarization: 1.70 SS G_CDS: 1.87 Total: 3.57 kcal Total: -26.45 -0.39 -26.84 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.802 kcal (2) G-P(sol) polarization free energy of solvation -26.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.836 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.965 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds