Wall clock time and date at job start Sun Mar 7 2021 02:33:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35654 * 117.00011 * 2 1 4 4 C 1.38402 * 120.12060 * 359.97438 * 3 2 1 5 5 C 1.38729 * 120.03155 * 180.02562 * 4 3 2 6 6 O 1.35710 * 119.86533 * 179.97438 * 5 4 3 7 7 C 1.42899 * 116.99992 * 359.97438 * 6 5 4 8 8 C 1.39153 * 120.27244 * 0.02562 * 5 4 3 9 9 C 1.50695 * 119.87570 * 179.97438 * 8 5 4 10 10 O 1.42908 * 109.47324 * 284.99626 * 9 8 5 11 11 Si 1.86304 * 109.47078 * 164.99974 * 9 8 5 12 12 C 1.37579 * 120.23879 * 359.67170 * 8 5 4 13 13 C 1.39819 * 119.96462 * 0.62933 * 12 8 5 14 14 C 1.47301 * 120.13595 * 179.67354 * 13 12 8 15 15 O 1.21623 * 120.00000 * 179.72180 * 14 13 12 16 16 N 1.34773 * 120.00070 * 359.97438 * 14 13 12 17 17 C 1.46500 * 120.00431 * 179.72645 * 16 14 13 18 18 H 1.09006 * 112.84642 * 336.19847 * 17 16 14 19 19 C 1.53774 * 113.61696 * 107.50253 * 17 16 14 20 20 C 1.53780 * 87.08094 * 139.98559 * 19 17 16 21 21 H 1.09000 * 113.61581 * 89.12317 * 20 19 17 22 22 C 1.53010 * 113.61327 * 220.02267 * 20 19 17 23 23 N 1.46500 * 109.46697 * 272.49733 * 22 20 19 24 24 C 1.34952 * 126.03620 * 124.71868 * 23 22 20 25 25 C 1.35317 * 107.74308 * 179.83695 * 24 23 22 26 26 C 1.39866 * 107.92307 * 0.42152 * 25 24 23 27 27 N 1.30838 * 108.20300 * 359.73655 * 26 25 24 28 28 C 1.53780 * 113.61736 * 205.00698 * 17 16 14 29 29 H 1.08992 * 109.46993 * 300.00244 * 1 2 3 30 30 H 1.08997 * 109.46567 * 60.00145 * 1 2 3 31 31 H 1.08992 * 109.46818 * 180.02562 * 1 2 3 32 32 H 1.07993 * 119.98243 * 0.02562 * 4 3 2 33 33 H 1.09004 * 109.46641 * 60.00262 * 7 6 5 34 34 H 1.09000 * 109.47604 * 180.02562 * 7 6 5 35 35 H 1.09001 * 109.46977 * 300.00569 * 7 6 5 36 36 H 1.08996 * 109.47770 * 45.00013 * 9 8 5 37 37 H 0.96698 * 113.99951 * 300.01024 * 10 9 8 38 38 H 1.48508 * 109.99690 * 58.67874 * 11 9 8 39 39 H 1.48496 * 110.00306 * 179.97438 * 11 9 8 40 40 H 1.08004 * 120.02091 * 180.29473 * 12 8 5 41 41 H 0.97000 * 120.00112 * 359.73083 * 16 14 13 42 42 H 1.08994 * 113.61732 * 254.53524 * 19 17 16 43 43 H 1.09001 * 113.61275 * 25.43630 * 19 17 16 44 44 H 1.08997 * 109.47304 * 32.49319 * 22 20 19 45 45 H 1.08992 * 109.47108 * 152.50056 * 22 20 19 46 46 H 1.07999 * 126.12430 * 359.97438 * 24 23 22 47 47 H 1.08005 * 126.03744 * 180.15944 * 25 24 23 48 48 H 1.08004 * 125.89888 * 179.75927 * 26 25 24 49 49 H 1.09001 * 113.61340 * 334.56146 * 28 17 16 50 50 H 1.08992 * 113.62029 * 105.46665 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 -0.0005 5 6 1.9253 3.6061 -0.0011 6 8 1.1853 4.7437 -0.0021 7 6 -0.2358 4.5932 -0.0032 8 6 3.3147 3.6834 -0.0016 9 6 3.9916 5.0297 -0.0028 10 8 3.8937 5.6111 -1.3046 11 14 5.7866 4.8227 0.4514 12 6 4.0725 2.5351 0.0052 13 6 3.4462 1.2851 -0.0006 14 6 4.2539 0.0532 -0.0006 15 8 3.7065 -1.0329 -0.0006 16 7 5.5995 0.1297 0.0045 17 6 6.4028 -1.0954 0.0105 18 1 5.8648 -1.9524 0.4158 19 6 7.1002 -1.3814 -1.3298 20 6 8.3218 -1.8275 -0.5091 21 1 8.3091 -2.8854 -0.2470 22 6 9.6576 -1.3775 -1.1044 23 7 10.1210 -2.3743 -2.0729 24 6 10.4414 -2.1391 -3.3626 25 6 10.8243 -3.3143 -3.9133 26 6 10.7256 -4.3032 -2.9291 27 7 10.3042 -3.7409 -1.8255 28 6 7.8061 -0.9089 0.6112 29 1 -0.3633 0.5138 0.8899 30 1 -0.3632 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 0.2150 2.3164 -0.0005 33 1 -0.5436 4.0443 0.8868 34 1 -0.7054 5.5768 -0.0044 35 1 -0.5422 4.0435 -0.8932 36 1 3.5060 5.6813 0.7236 37 1 4.3056 5.0839 -2.0027 38 1 6.4526 3.9110 -0.5133 39 1 6.4656 6.1433 0.4532 40 1 5.1506 2.5992 0.0096 41 1 6.0360 0.9959 0.0042 42 1 6.6384 -2.1880 -1.8990 43 1 7.2789 -0.4881 -1.9284 44 1 9.5277 -0.4179 -1.6047 45 1 10.3943 -1.2752 -0.3077 46 1 10.4016 -1.1836 -3.8645 47 1 11.1450 -3.4632 -4.9338 48 1 10.9577 -5.3502 -3.0579 49 1 8.1778 0.1135 0.5433 50 1 7.9141 -1.3342 1.6089 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:01 Heat of formation + Delta-G solvation = 9.040724 kcal Electronic energy + Delta-G solvation = -34158.942419 eV Core-core repulsion = 29543.172158 eV Total energy + Delta-G solvation = -4615.770261 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.13045 -41.98071 -40.91622 -40.09840 -39.18266 -38.48616 -37.03389 -35.05018 -33.54224 -32.25680 -31.66289 -30.90777 -29.10775 -28.66023 -28.10724 -26.83079 -26.16452 -25.11458 -23.81002 -22.66597 -22.00724 -21.61030 -21.40989 -20.55714 -20.01614 -18.81134 -18.37539 -18.06543 -17.93053 -17.27972 -17.19954 -16.65224 -16.55598 -16.44046 -16.25787 -16.12521 -15.88338 -15.77875 -15.51551 -15.44820 -15.12810 -14.63626 -14.54422 -14.29899 -14.17352 -14.03222 -13.69639 -13.64301 -13.57867 -13.36137 -13.24081 -12.90261 -12.79321 -12.63141 -12.57586 -12.32185 -12.22024 -11.89968 -11.84725 -11.70493 -11.52462 -11.44819 -10.69278 -10.58869 -10.24933 -10.00467 -9.92391 -9.42657 -9.15900 -5.07537 -0.22382 0.09204 1.05235 1.18413 1.40649 1.61628 1.81298 1.87714 2.03026 2.03941 2.12286 2.17357 2.66902 3.31716 3.37274 3.38627 3.42695 3.46443 3.56526 3.70359 3.71997 3.79825 3.88736 3.96454 3.97757 4.03410 4.06760 4.09583 4.11776 4.12321 4.21122 4.28322 4.39458 4.41271 4.49753 4.51837 4.53380 4.63345 4.68286 4.75632 4.80172 4.90165 4.93368 4.95176 4.97149 5.00715 5.18468 5.23531 5.28046 5.56403 5.81504 5.98642 6.14279 6.27026 6.41915 6.55158 6.86396 7.36167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.314 4.314 5 C 0.224 3.776 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.195 4.195 9 C -0.058 4.058 10 O -0.524 6.524 11 Si 0.682 3.318 12 C -0.013 4.013 13 C -0.210 4.210 14 C 0.567 3.433 15 O -0.517 6.517 16 N -0.723 5.723 17 C 0.129 3.871 18 H 0.120 0.880 19 C -0.148 4.148 20 C -0.120 4.120 21 H 0.110 0.890 22 C 0.145 3.855 23 N -0.370 5.370 24 C 0.052 3.948 25 C -0.275 4.275 26 C 0.044 3.956 27 N -0.294 5.294 28 C -0.138 4.138 29 H 0.058 0.942 30 H 0.057 0.943 31 H 0.107 0.893 32 H 0.145 0.855 33 H 0.060 0.940 34 H 0.107 0.893 35 H 0.059 0.941 36 H 0.119 0.881 37 H 0.372 0.628 38 H -0.258 1.258 39 H -0.253 1.253 40 H 0.139 0.861 41 H 0.396 0.604 42 H 0.074 0.926 43 H 0.084 0.916 44 H 0.095 0.905 45 H 0.088 0.912 46 H 0.171 0.829 47 H 0.146 0.854 48 H 0.183 0.817 49 H 0.090 0.910 50 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.984 3.723 1.089 4.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.176 3.824 6 O -0.206 6.206 7 C -0.073 4.073 8 C -0.197 4.197 9 C -0.168 4.168 10 O -0.329 6.329 11 Si 0.583 3.417 12 C -0.031 4.031 13 C -0.214 4.214 14 C 0.355 3.645 15 O -0.393 6.393 16 N -0.376 5.376 17 C 0.024 3.976 18 H 0.137 0.863 19 C -0.186 4.186 20 C -0.140 4.140 21 H 0.128 0.872 22 C 0.024 3.976 23 N -0.153 5.153 24 C -0.095 4.095 25 C -0.305 4.305 26 C -0.142 4.142 27 N -0.116 5.116 28 C -0.177 4.177 29 H 0.077 0.923 30 H 0.076 0.924 31 H 0.126 0.874 32 H 0.162 0.838 33 H 0.078 0.922 34 H 0.125 0.875 35 H 0.077 0.923 36 H 0.136 0.864 37 H 0.219 0.781 38 H -0.183 1.183 39 H -0.178 1.178 40 H 0.157 0.843 41 H 0.231 0.769 42 H 0.092 0.908 43 H 0.103 0.897 44 H 0.114 0.886 45 H 0.106 0.894 46 H 0.188 0.812 47 H 0.164 0.836 48 H 0.199 0.801 49 H 0.108 0.892 50 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -1.127 3.437 2.506 4.400 hybrid contribution -0.412 0.556 -2.211 2.316 sum -1.539 3.992 0.295 4.289 Atomic orbital electron populations 1.23246 0.78186 1.04886 1.01346 1.86404 1.21216 1.25040 1.85724 1.18736 0.90655 0.84419 0.87653 1.21309 1.01150 0.91506 1.19410 1.18715 0.90432 0.84683 0.88597 1.86159 1.19467 1.28481 1.86536 1.23220 0.77805 1.04676 1.01649 1.19358 0.90781 0.96238 1.13282 1.24800 1.10717 0.92912 0.88360 1.86660 1.80088 1.49913 1.16282 0.95244 0.74327 0.82145 0.89965 1.20871 0.99254 0.90079 0.92938 1.19047 0.90658 0.93563 1.18098 1.17845 0.81838 0.88584 0.76242 1.90854 1.71358 1.28703 1.48344 1.45869 1.05931 1.09189 1.76577 1.22424 0.89877 0.88723 0.96555 0.86260 1.23572 0.95930 1.01852 0.97282 1.22711 0.92592 1.01653 0.97038 0.87156 1.21745 0.95987 0.88530 0.91338 1.48715 1.51136 1.06808 1.08617 1.22574 1.00594 1.00675 0.85622 1.21551 1.14825 0.92194 1.01888 1.23927 0.99057 1.00538 0.90705 1.77341 1.22590 0.87961 1.23701 1.23385 0.94806 1.00373 0.99108 0.92324 0.92419 0.87447 0.83759 0.92174 0.87480 0.92272 0.86358 0.78085 1.18336 1.17757 0.84338 0.76888 0.90751 0.89732 0.88628 0.89405 0.81160 0.83582 0.80055 0.89181 0.89741 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.27 -0.94 8.56 -40.58 -0.35 -1.29 16 3 C 0.23 0.57 6.70 -38.73 -0.26 0.31 16 4 C -0.31 -0.18 8.01 -39.34 -0.31 -0.49 16 5 C 0.22 0.21 6.67 -39.06 -0.26 -0.05 16 6 O -0.30 -0.27 9.80 -18.84 -0.18 -0.45 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.20 -0.02 5.27 -104.53 -0.55 -0.57 16 9 C -0.06 0.02 2.37 36.00 0.09 0.11 16 10 O -0.52 -0.60 12.88 -35.23 -0.45 -1.06 16 11 Si 0.68 -1.52 30.23 -169.99 -5.14 -6.66 16 12 C -0.01 0.01 8.14 -39.23 -0.32 -0.31 16 13 C -0.21 -0.41 5.89 -104.83 -0.62 -1.02 16 14 C 0.57 1.82 7.76 -12.58 -0.10 1.72 16 15 O -0.52 -3.71 14.75 -16.67 -0.25 -3.96 16 16 N -0.72 0.15 5.30 -54.13 -0.29 -0.14 16 17 C 0.13 -0.04 4.24 -67.12 -0.28 -0.33 16 18 H 0.12 0.21 7.46 -51.93 -0.39 -0.17 16 19 C -0.15 0.08 7.43 -25.92 -0.19 -0.11 16 20 C -0.12 0.15 3.87 -89.80 -0.35 -0.19 16 21 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 22 C 0.15 -0.23 6.35 -4.04 -0.03 -0.26 16 23 N -0.37 -0.55 3.68 -61.36 -0.23 -0.77 16 24 C 0.05 0.03 11.45 -17.22 -0.20 -0.17 16 25 C -0.28 -0.37 10.80 -40.01 -0.43 -0.80 16 26 C 0.04 0.10 12.03 -17.37 -0.21 -0.11 16 27 N -0.29 -1.12 12.27 30.62 0.38 -0.75 16 28 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 31 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 32 H 0.14 -0.23 4.50 -52.49 -0.24 -0.47 16 33 H 0.06 -0.21 7.65 -51.93 -0.40 -0.61 16 34 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 35 H 0.06 -0.18 7.65 -51.93 -0.40 -0.58 16 36 H 0.12 -0.03 7.82 -51.93 -0.41 -0.44 16 37 H 0.37 -0.72 8.70 45.56 0.40 -0.33 16 38 H -0.26 0.50 6.69 56.52 0.38 0.88 16 39 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 40 H 0.14 -0.42 3.16 -52.48 -0.17 -0.59 16 41 H 0.40 -1.16 6.74 -40.82 -0.28 -1.43 16 42 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 43 H 0.08 -0.13 7.90 -51.93 -0.41 -0.54 16 44 H 0.10 -0.37 7.77 -51.93 -0.40 -0.78 16 45 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 46 H 0.17 -0.46 8.06 -52.49 -0.42 -0.88 16 47 H 0.15 -0.07 8.06 -52.48 -0.42 -0.49 16 48 H 0.18 -0.05 8.06 -52.48 -0.42 -0.47 16 49 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 50 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 LS Contribution 410.80 15.07 6.19 6.19 Total: 0.00 -11.61 410.80 -9.46 -21.07 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -6.91 Total: -12.03 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -2.23 Total: -0.16 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.14 Total: -1.66 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -1.23 Total: -6.76 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.14 Total: -6.66 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -11.61 -9.46 -21.07 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.112 kcal (2) G-P(sol) polarization free energy of solvation -11.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.072 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds