Wall clock time and date at job start Sun Mar 7 2021 02:33:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.46822 * 2 1 4 4 C 1.50699 * 109.47486 * 120.00155 * 2 1 3 5 5 C 1.37852 * 119.88851 * 65.02479 * 4 2 1 6 6 C 1.39664 * 119.87508 * 179.97438 * 5 4 2 7 7 C 1.47695 * 120.16312 * 180.02562 * 6 5 4 8 8 O 1.21570 * 119.99734 * 179.97438 * 7 6 5 9 9 N 1.34771 * 120.00061 * 359.97438 * 7 6 5 10 10 C 1.46505 * 119.99747 * 179.97438 * 9 7 6 11 11 H 1.08996 * 112.85166 * 23.80065 * 10 9 7 12 12 C 1.53778 * 113.61242 * 154.99656 * 10 9 7 13 13 C 1.53785 * 87.08087 * 139.98136 * 12 10 9 14 14 H 1.08995 * 113.61465 * 89.11469 * 13 12 10 15 15 C 1.53000 * 113.61373 * 220.01769 * 13 12 10 16 16 N 1.46495 * 109.47048 * 184.99480 * 15 13 12 17 17 C 1.34955 * 126.03329 * 124.71794 * 16 15 13 18 18 C 1.35319 * 107.74292 * 179.84302 * 17 16 15 19 19 C 1.39873 * 107.92094 * 0.42005 * 18 17 16 20 20 N 1.30834 * 108.20200 * 359.74133 * 19 18 17 21 21 C 1.53777 * 87.07905 * 334.56635 * 13 12 10 22 22 C 1.39823 * 119.66797 * 359.97438 * 6 5 4 23 23 F 1.35103 * 120.11013 * 180.27459 * 22 6 5 24 24 C 1.38325 * 119.77792 * 359.97438 * 22 6 5 25 25 C 1.38203 * 120.11835 * 0.02562 * 24 22 6 26 26 H 0.96696 * 113.99764 * 299.99458 * 1 2 3 27 27 H 1.09002 * 109.46989 * 240.00878 * 2 1 3 28 28 H 1.48498 * 110.00332 * 178.68076 * 3 2 1 29 29 H 1.48504 * 110.00059 * 300.00513 * 3 2 1 30 30 H 1.07998 * 120.06417 * 359.95260 * 5 4 2 31 31 H 0.97000 * 120.00300 * 359.97438 * 9 7 6 32 32 H 1.09006 * 113.61660 * 254.52974 * 12 10 9 33 33 H 1.09000 * 113.61960 * 25.43471 * 12 10 9 34 34 H 1.09002 * 109.47306 * 305.00082 * 15 13 12 35 35 H 1.09003 * 109.46956 * 64.99937 * 15 13 12 36 36 H 1.08004 * 126.12789 * 359.97438 * 17 16 15 37 37 H 1.08004 * 126.04065 * 180.16279 * 18 17 16 38 38 H 1.08002 * 125.89710 * 179.75866 * 19 18 17 39 39 H 1.09000 * 113.61701 * 270.88268 * 21 13 12 40 40 H 1.09002 * 113.61768 * 139.98237 * 21 13 12 41 41 H 1.07997 * 119.93924 * 180.02562 * 24 22 6 42 42 H 1.07996 * 119.82790 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 1.6847 -2.0566 1.3952 6 6 2.1510 -2.7149 2.5354 7 6 1.8907 -4.1572 2.7182 8 8 2.2983 -4.7272 3.7116 9 7 1.2014 -4.8413 1.7838 10 6 0.9438 -6.2721 1.9649 11 1 0.9725 -6.5783 3.0106 12 6 -0.2979 -6.7748 1.2097 13 6 0.5153 -8.0355 0.8714 14 1 0.4276 -8.8249 1.6178 15 6 0.2987 -8.5395 -0.5569 16 7 1.0179 -9.8020 -0.7434 17 6 0.4808 -10.9672 -1.1621 18 6 1.4729 -11.8865 -1.2055 19 6 2.6548 -11.2642 -0.7903 20 7 2.3832 -10.0148 -0.5130 21 6 1.7761 -7.1704 1.0349 22 6 2.8662 -2.0018 3.5024 23 9 3.3262 -2.6308 4.6060 24 6 3.1067 -0.6516 3.3222 25 6 2.6412 -0.0093 2.1905 26 1 -0.3933 0.4416 0.7651 27 1 1.7924 -0.5137 -0.8901 28 1 3.5345 1.7705 0.0321 29 1 1.5613 2.4680 -1.2085 30 1 1.1317 -2.6012 0.6443 31 1 0.8758 -4.3864 0.9913 32 1 -1.1539 -6.9679 1.8564 33 1 -0.5524 -6.1723 0.3377 34 1 -0.7658 -8.6988 -0.7285 35 1 0.6740 -7.7997 -1.2640 36 1 -0.5547 -11.1352 -1.4187 37 1 1.3695 -12.9194 -1.5037 38 1 3.6241 -11.7340 -0.7123 39 1 2.0888 -6.6761 0.1152 40 1 2.5947 -7.6828 1.5405 41 1 3.6592 -0.0984 4.0672 42 1 2.8320 1.0450 2.0544 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:05 Heat of formation + Delta-G solvation = 30.283982 kcal Electronic energy + Delta-G solvation = -27388.719245 eV Core-core repulsion = 23252.855808 eV Total energy + Delta-G solvation = -4135.863438 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -49.86263 -42.05722 -41.45497 -40.45972 -39.25491 -37.60149 -35.23374 -33.77623 -32.55238 -32.30155 -30.91586 -28.58319 -26.83069 -26.76176 -25.79904 -24.24178 -22.87979 -21.91541 -21.69980 -21.45139 -20.76251 -19.22651 -18.39041 -18.32788 -18.24615 -17.45756 -16.96348 -16.84213 -16.57078 -16.33507 -15.97558 -15.82508 -15.74824 -15.53315 -15.19797 -14.90540 -14.83126 -14.49089 -14.35623 -14.01542 -13.80459 -13.65618 -13.58309 -13.46173 -13.29833 -13.01939 -12.87961 -12.30830 -12.29066 -12.00095 -11.93466 -11.58694 -11.40298 -11.02316 -10.61280 -10.44080 -10.28775 -10.08436 -9.86673 -9.46417 -5.19666 -0.53599 -0.13126 1.02953 1.09801 1.48008 1.58725 1.64371 1.83477 1.99338 2.02033 2.45663 2.99731 3.19607 3.20426 3.31344 3.34891 3.41214 3.49780 3.56949 3.68387 3.84598 3.92626 3.95397 3.97476 4.07810 4.18044 4.24485 4.27231 4.41354 4.53079 4.59952 4.62677 4.65210 4.74206 4.76710 4.82925 4.86041 4.92536 5.00660 5.07092 5.13515 5.16865 5.45272 5.51809 5.79500 6.11796 6.36368 6.36836 6.84967 7.12275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.066 4.066 3 Si 0.686 3.314 4 C -0.141 4.141 5 C -0.031 4.031 6 C -0.175 4.175 7 C 0.560 3.440 8 O -0.519 6.519 9 N -0.715 5.715 10 C 0.123 3.877 11 H 0.119 0.881 12 C -0.138 4.138 13 C -0.118 4.118 14 H 0.101 0.899 15 C 0.145 3.855 16 N -0.373 5.373 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.042 3.958 20 N -0.289 5.289 21 C -0.134 4.134 22 C 0.167 3.833 23 F -0.110 7.110 24 C -0.156 4.156 25 C -0.059 4.059 26 H 0.381 0.619 27 H 0.117 0.883 28 H -0.255 1.255 29 H -0.252 1.252 30 H 0.138 0.862 31 H 0.400 0.600 32 H 0.082 0.918 33 H 0.091 0.909 34 H 0.099 0.901 35 H 0.086 0.914 36 H 0.172 0.828 37 H 0.147 0.853 38 H 0.182 0.818 39 H 0.086 0.914 40 H 0.078 0.922 41 H 0.150 0.850 42 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.707 3.440 -2.710 6.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.587 3.413 4 C -0.142 4.142 5 C -0.050 4.050 6 C -0.179 4.179 7 C 0.346 3.654 8 O -0.395 6.395 9 N -0.366 5.366 10 C 0.018 3.982 11 H 0.137 0.863 12 C -0.176 4.176 13 C -0.138 4.138 14 H 0.119 0.881 15 C 0.024 3.976 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.144 4.144 20 N -0.111 5.111 21 C -0.173 4.173 22 C 0.147 3.853 23 F -0.088 7.088 24 C -0.175 4.175 25 C -0.077 4.077 26 H 0.229 0.771 27 H 0.135 0.865 28 H -0.179 1.179 29 H -0.176 1.176 30 H 0.156 0.844 31 H 0.236 0.764 32 H 0.101 0.899 33 H 0.109 0.891 34 H 0.117 0.883 35 H 0.104 0.896 36 H 0.190 0.810 37 H 0.164 0.836 38 H 0.199 0.801 39 H 0.104 0.896 40 H 0.097 0.903 41 H 0.168 0.832 42 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.437 4.532 -2.510 6.217 hybrid contribution -0.324 -1.418 -0.700 1.614 sum -3.761 3.114 -3.210 5.843 Atomic orbital electron populations 1.86519 1.16788 1.81680 1.49407 1.25044 0.85454 1.10277 0.96941 0.94790 0.81193 0.77546 0.87732 1.20325 1.01289 0.94611 0.97936 1.21012 0.95253 0.93784 0.94925 1.20094 1.05763 0.94647 0.97399 1.18009 0.78356 0.85860 0.83138 1.90875 1.50103 1.69914 1.28616 1.45842 1.56871 1.10134 1.23775 1.22564 0.95734 0.78875 1.01029 0.86342 1.23390 0.97374 0.96047 1.00817 1.22626 0.98035 0.96878 0.96249 0.88125 1.21734 0.95850 0.82778 0.97263 1.48735 1.06610 1.08879 1.51320 1.22609 1.00092 0.86291 1.00588 1.21563 0.92549 1.01473 1.14796 1.23956 0.99886 0.91651 0.98944 1.77399 0.92004 1.18287 1.23389 1.23449 0.97257 0.96440 1.00127 1.17762 0.93861 0.90428 0.83291 1.91635 1.85531 1.82206 1.49457 1.21179 1.03566 0.92621 1.00143 1.21075 0.94672 0.99716 0.92197 0.77127 0.86527 1.17947 1.17626 0.84432 0.76394 0.89899 0.89054 0.88322 0.89612 0.81034 0.83550 0.80096 0.89556 0.90311 0.83192 0.84077 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.25 12.83 -35.23 -0.45 0.80 16 2 C -0.07 0.18 2.80 36.01 0.10 0.28 16 3 Si 0.69 -2.08 29.79 -169.99 -5.06 -7.15 16 4 C -0.14 0.30 5.35 -104.68 -0.56 -0.26 16 5 C -0.03 0.04 9.17 -39.19 -0.36 -0.32 16 6 C -0.17 -0.24 5.88 -104.91 -0.62 -0.85 16 7 C 0.56 1.74 7.77 -12.40 -0.10 1.64 16 8 O -0.52 -3.82 14.94 5.30 0.08 -3.74 16 9 N -0.71 0.18 5.31 -54.01 -0.29 -0.11 16 10 C 0.12 -0.03 4.24 -67.12 -0.28 -0.31 16 11 H 0.12 0.22 7.46 -51.93 -0.39 -0.17 16 12 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 13 C -0.12 0.18 3.83 -89.81 -0.34 -0.17 16 14 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 15 C 0.15 -0.27 6.35 -4.04 -0.03 -0.29 16 16 N -0.37 -0.47 3.68 -61.36 -0.23 -0.70 16 17 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 18 C -0.27 -0.31 10.80 -40.01 -0.43 -0.75 16 19 C 0.04 0.09 12.03 -17.36 -0.21 -0.11 16 20 N -0.29 -1.05 12.42 30.63 0.38 -0.67 16 21 C -0.13 -0.01 7.43 -25.92 -0.19 -0.21 16 22 C 0.17 0.34 7.29 -38.96 -0.28 0.06 16 23 F -0.11 -0.55 15.55 2.25 0.04 -0.51 16 24 C -0.16 0.15 10.01 -39.56 -0.40 -0.24 16 25 C -0.06 0.15 8.66 -39.51 -0.34 -0.19 16 26 H 0.38 -2.27 8.70 45.56 0.40 -1.88 16 27 H 0.12 -0.29 7.96 -51.93 -0.41 -0.71 16 28 H -0.25 0.15 7.11 56.52 0.40 0.55 16 29 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 30 H 0.14 -0.46 6.41 -52.49 -0.34 -0.80 16 31 H 0.40 -1.21 6.76 -40.82 -0.28 -1.49 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 34 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 35 H 0.09 -0.19 7.84 -51.93 -0.41 -0.60 16 36 H 0.17 -0.52 8.06 -52.48 -0.42 -0.95 16 37 H 0.15 -0.09 8.06 -52.48 -0.42 -0.52 16 38 H 0.18 -0.04 8.06 -52.49 -0.42 -0.46 16 39 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 40 H 0.08 0.20 8.14 -51.93 -0.42 -0.23 16 41 H 0.15 -0.44 8.06 -52.49 -0.42 -0.86 16 42 H 0.14 -0.70 4.88 -52.49 -0.26 -0.96 16 LS Contribution 359.87 15.07 5.42 5.42 Total: 0.00 -10.73 359.87 -9.63 -20.36 By element: Atomic # 1 Polarization: -6.92 SS G_CDS: -5.09 Total: -12.01 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -4.43 Total: -1.69 kcal Atomic # 7 Polarization: -1.35 SS G_CDS: -0.13 Total: -1.48 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -0.37 Total: -2.94 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.51 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: -5.06 Total: -7.15 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.73 -9.63 -20.36 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.640 kcal (2) G-P(sol) polarization free energy of solvation -10.730 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.356 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds