Wall clock time and date at job start Sun Mar 7 2021 02:33:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.47043 * 2 1 4 4 C 1.50700 * 109.46978 * 119.99830 * 2 1 3 5 5 C 1.38234 * 120.00260 * 65.00134 * 4 2 1 6 6 C 1.38234 * 120.00240 * 179.97438 * 5 4 2 7 7 C 1.38233 * 120.00037 * 0.26327 * 6 5 4 8 8 C 1.50693 * 120.00207 * 179.72405 * 7 6 5 9 9 C 1.50709 * 109.47444 * 89.99457 * 8 7 6 10 10 O 1.21276 * 119.99531 * 0.02562 * 9 8 7 11 11 N 1.34771 * 120.00247 * 180.02562 * 9 8 7 12 12 C 1.46497 * 119.99945 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85326 * 23.79783 * 12 11 9 14 14 C 1.53780 * 113.61205 * 154.99766 * 12 11 9 15 15 C 1.53789 * 87.08116 * 139.97825 * 14 12 11 16 16 H 1.08999 * 113.61386 * 89.11159 * 15 14 12 17 17 C 1.52998 * 113.61549 * 219.93253 * 15 14 12 18 18 N 1.46497 * 109.46902 * 184.99755 * 17 15 14 19 19 C 1.34943 * 126.03584 * 124.72000 * 18 17 15 20 20 C 1.35323 * 107.74830 * 179.83582 * 19 18 17 21 21 C 1.39872 * 107.91673 * 0.42491 * 20 19 18 22 22 N 1.30841 * 108.20114 * 359.73150 * 21 20 19 23 23 C 1.53780 * 113.61266 * 252.49305 * 12 11 9 24 24 C 1.38238 * 119.99752 * 359.47832 * 7 6 5 25 25 C 1.38234 * 120.00033 * 0.49775 * 24 7 6 26 26 H 0.96704 * 114.00337 * 60.00396 * 1 2 3 27 27 H 1.08997 * 109.47550 * 240.00019 * 2 1 3 28 28 H 1.48506 * 109.99870 * 298.67956 * 3 2 1 29 29 H 1.48499 * 110.00179 * 59.99708 * 3 2 1 30 30 H 1.07999 * 119.99751 * 359.97438 * 5 4 2 31 31 H 1.08002 * 119.99744 * 179.97438 * 6 5 4 32 32 H 1.09000 * 109.47097 * 209.99342 * 8 7 6 33 33 H 1.09001 * 109.47081 * 329.99847 * 8 7 6 34 34 H 0.97006 * 119.99744 * 359.97438 * 11 9 8 35 35 H 1.09002 * 113.61529 * 254.52380 * 14 12 11 36 36 H 1.08998 * 113.62024 * 25.34887 * 14 12 11 37 37 H 1.08996 * 109.47428 * 304.99923 * 17 15 14 38 38 H 1.09001 * 109.46842 * 65.00267 * 17 15 14 39 39 H 1.08005 * 126.13019 * 359.97438 * 19 18 17 40 40 H 1.07995 * 126.03978 * 180.15616 * 20 19 18 41 41 H 1.07999 * 125.89985 * 179.72079 * 21 20 19 42 42 H 1.09011 * 113.61475 * 334.56897 * 23 12 11 43 43 H 1.08999 * 113.61566 * 105.46857 * 23 12 11 44 44 H 1.07999 * 119.99934 * 180.25938 * 24 7 6 45 45 H 1.08001 * 120.00294 * 179.76453 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6847 -2.0601 1.3985 6 6 2.1459 -2.7119 2.5269 7 6 2.8490 -2.0127 3.4901 8 6 3.3464 -2.7218 4.7232 9 6 4.7292 -3.2639 4.4677 10 8 5.2588 -3.0909 3.3904 11 7 5.3773 -3.9408 5.4362 12 6 6.7217 -4.4672 5.1880 13 1 7.2475 -3.9302 4.3986 14 6 7.5556 -4.6547 6.4664 15 6 8.0680 -5.9652 5.8458 16 1 8.9623 -5.8389 5.2356 17 6 8.1915 -7.1121 6.8509 18 7 8.7960 -8.2738 6.1942 19 6 9.9014 -8.9309 6.6032 20 6 10.1268 -9.9413 5.7317 21 6 9.1304 -9.8941 4.7512 22 7 8.3321 -8.8950 5.0275 23 6 6.7650 -5.9962 5.0298 24 6 3.1002 -0.6640 3.3196 25 6 2.6395 -0.0124 2.1909 26 1 -0.3934 0.4417 -0.7651 27 1 1.7924 -0.5138 -0.8899 28 1 1.5878 2.4586 -1.2243 29 1 1.5614 2.4680 1.2084 30 1 1.1317 -2.6055 0.6480 31 1 1.9529 -3.7663 2.6583 32 1 3.3795 -2.0206 5.5571 33 1 2.6731 -3.5438 4.9661 34 1 4.9538 -4.0787 6.2980 35 1 8.3316 -3.9003 6.5961 36 1 6.9534 -4.8009 7.3631 37 1 8.8195 -6.7985 7.6847 38 1 7.2017 -7.3785 7.2215 39 1 10.4979 -8.6945 7.4719 40 1 10.9358 -10.6550 5.7817 41 1 9.0363 -10.5662 3.9110 42 1 5.9465 -6.5107 5.5335 43 1 6.9026 -6.3249 3.9996 44 1 3.6532 -0.1187 4.0700 45 1 2.8324 1.0421 2.0595 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:09 Heat of formation + Delta-G solvation = 67.565615 kcal Electronic energy + Delta-G solvation = -26265.889757 eV Core-core repulsion = 22445.559329 eV Total energy + Delta-G solvation = -3820.330428 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.04722 -41.27506 -40.41768 -39.29053 -37.65718 -35.08704 -34.13995 -33.41950 -31.84152 -30.94128 -29.93012 -28.41009 -26.81252 -25.81572 -24.03326 -23.71536 -22.10055 -21.91191 -21.43734 -21.38316 -20.63871 -18.48320 -18.32203 -18.02017 -17.61802 -17.06352 -16.85976 -16.54696 -16.18534 -15.95796 -15.58080 -15.29821 -15.13924 -14.90328 -14.78129 -14.53725 -14.29471 -14.01682 -13.85395 -13.65874 -13.59041 -13.53902 -13.38889 -13.19503 -12.96321 -12.81627 -12.28621 -12.13713 -11.92655 -11.85919 -11.60397 -11.57737 -11.39086 -10.80421 -10.43364 -10.28652 -10.01111 -9.74989 -9.51427 -9.46101 -4.90869 0.34004 0.58188 1.02963 1.33020 1.59104 1.62889 1.68715 1.98146 2.01927 2.16505 2.81804 3.21345 3.35484 3.41996 3.55633 3.64003 3.69281 3.88170 3.92047 3.94080 3.95964 3.98886 4.09750 4.11842 4.20624 4.25590 4.27844 4.43004 4.48076 4.54727 4.57680 4.61291 4.69778 4.74719 4.78529 4.87756 4.93236 5.07217 5.08267 5.16354 5.17278 5.19371 5.47857 5.53232 5.66225 5.68006 5.79479 6.09447 6.11825 6.47848 6.49057 6.84916 7.27083 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.684 3.316 4 C -0.072 4.072 5 C -0.090 4.090 6 C -0.103 4.103 7 C -0.064 4.064 8 C -0.104 4.104 9 C 0.515 3.485 10 O -0.525 6.525 11 N -0.724 5.724 12 C 0.123 3.877 13 H 0.116 0.884 14 C -0.138 4.138 15 C -0.119 4.119 16 H 0.099 0.901 17 C 0.145 3.855 18 N -0.372 5.372 19 C 0.050 3.950 20 C -0.274 4.274 21 C 0.042 3.958 22 N -0.289 5.289 23 C -0.134 4.134 24 C -0.099 4.099 25 C -0.114 4.114 26 H 0.379 0.621 27 H 0.076 0.924 28 H -0.262 1.262 29 H -0.255 1.255 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.104 0.896 34 H 0.401 0.599 35 H 0.080 0.920 36 H 0.090 0.910 37 H 0.098 0.902 38 H 0.086 0.914 39 H 0.172 0.828 40 H 0.147 0.853 41 H 0.182 0.818 42 H 0.085 0.915 43 H 0.076 0.924 44 H 0.125 0.875 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.507 -0.193 5.057 5.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.585 3.415 4 C -0.072 4.072 5 C -0.108 4.108 6 C -0.121 4.121 7 C -0.065 4.065 8 C -0.144 4.144 9 C 0.301 3.699 10 O -0.400 6.400 11 N -0.375 5.375 12 C 0.018 3.982 13 H 0.134 0.866 14 C -0.177 4.177 15 C -0.139 4.139 16 H 0.117 0.883 17 C 0.024 3.976 18 N -0.155 5.155 19 C -0.096 4.096 20 C -0.304 4.304 21 C -0.144 4.144 22 N -0.111 5.111 23 C -0.172 4.172 24 C -0.117 4.117 25 C -0.131 4.131 26 H 0.227 0.773 27 H 0.094 0.906 28 H -0.187 1.187 29 H -0.180 1.180 30 H 0.142 0.858 31 H 0.140 0.860 32 H 0.123 0.877 33 H 0.122 0.878 34 H 0.235 0.765 35 H 0.099 0.901 36 H 0.109 0.891 37 H 0.116 0.884 38 H 0.104 0.896 39 H 0.190 0.810 40 H 0.164 0.836 41 H 0.199 0.801 42 H 0.104 0.896 43 H 0.095 0.905 44 H 0.143 0.857 45 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.664 1.251 4.540 4.995 hybrid contribution -0.456 -0.854 0.220 0.993 sum 1.208 0.396 4.761 4.927 Atomic orbital electron populations 1.86590 1.17868 1.80185 1.49696 1.24812 0.84372 1.11028 0.98438 0.94915 0.91813 0.74657 0.80092 1.19221 0.98753 0.94178 0.95045 1.20935 0.98499 0.93815 0.97570 1.20990 0.97881 0.99587 0.93690 1.19256 0.98118 0.93767 0.95309 1.20698 0.94204 1.01617 0.97835 1.20609 0.87454 0.77569 0.84242 1.90755 1.68020 1.57039 1.24192 1.45993 1.17597 1.57201 1.16738 1.22489 0.82896 0.94390 0.98454 0.86618 1.23382 0.99763 0.96868 0.97666 1.22630 0.99675 0.93718 0.97828 0.88250 1.21735 0.99580 0.82108 0.94200 1.48733 1.21250 1.24844 1.20683 1.22608 0.91044 0.95074 1.00892 1.21562 1.05221 1.04406 0.99197 1.23955 0.93757 0.96744 0.99987 1.77399 1.23048 1.10640 0.99982 1.23436 0.96473 0.95611 1.01726 1.20869 0.99281 0.93941 0.97646 1.20913 0.98921 0.99357 0.93924 0.77348 0.90631 1.18688 1.18002 0.85800 0.85974 0.87707 0.87754 0.76475 0.90112 0.89115 0.88384 0.89620 0.81048 0.83561 0.80099 0.89612 0.90483 0.85745 0.85619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.23 12.81 -35.23 -0.45 -1.68 16 2 C -0.08 -0.11 2.79 36.01 0.10 -0.01 16 3 Si 0.68 0.22 29.85 -169.99 -5.07 -4.86 16 4 C -0.07 -0.21 5.38 -104.62 -0.56 -0.77 16 5 C -0.09 -0.27 9.69 -39.58 -0.38 -0.65 16 6 C -0.10 -0.24 9.70 -39.58 -0.38 -0.63 16 7 C -0.06 -0.11 4.37 -104.63 -0.46 -0.57 16 8 C -0.10 0.13 5.83 -29.03 -0.17 -0.04 16 9 C 0.52 0.55 7.82 -10.98 -0.09 0.46 16 10 O -0.53 -2.97 15.63 5.56 0.09 -2.88 16 11 N -0.72 1.20 5.35 -53.02 -0.28 0.91 16 12 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 13 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 14 C -0.14 0.47 7.39 -25.91 -0.19 0.28 16 15 C -0.12 0.22 3.82 -89.80 -0.34 -0.12 16 16 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 17 C 0.15 -0.31 6.35 -4.04 -0.03 -0.34 16 18 N -0.37 -0.37 3.68 -61.37 -0.23 -0.60 16 19 C 0.05 0.00 11.45 -17.22 -0.20 -0.19 16 20 C -0.27 -0.25 10.80 -40.01 -0.43 -0.69 16 21 C 0.04 0.08 12.03 -17.36 -0.21 -0.12 16 22 N -0.29 -0.97 12.42 30.63 0.38 -0.59 16 23 C -0.13 0.06 7.43 -25.92 -0.19 -0.14 16 24 C -0.10 -0.18 9.70 -39.58 -0.38 -0.57 16 25 C -0.11 -0.26 8.67 -39.58 -0.34 -0.60 16 26 H 0.38 -0.68 8.74 45.56 0.40 -0.28 16 27 H 0.08 -0.01 7.96 -51.93 -0.41 -0.42 16 28 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 29 H -0.26 -0.80 7.05 56.52 0.40 -0.40 16 30 H 0.12 0.26 8.06 -52.49 -0.42 -0.17 16 31 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 32 H 0.10 -0.36 8.09 -51.93 -0.42 -0.78 16 33 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 34 H 0.40 -1.85 8.73 -40.82 -0.36 -2.21 16 35 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 36 H 0.09 -0.46 8.08 -51.93 -0.42 -0.88 16 37 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 38 H 0.09 -0.22 7.85 -51.93 -0.41 -0.63 16 39 H 0.17 -0.56 8.06 -52.48 -0.42 -0.98 16 40 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 41 H 0.18 -0.08 8.06 -52.49 -0.42 -0.51 16 42 H 0.09 -0.06 7.90 -51.92 -0.41 -0.47 16 43 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 44 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 45 H 0.13 0.07 4.87 -52.49 -0.26 -0.19 16 LS Contribution 379.99 15.07 5.73 5.73 Total: 0.00 -10.81 379.99 -10.90 -21.71 By element: Atomic # 1 Polarization: -6.13 SS G_CDS: -6.52 Total: -12.65 kcal Atomic # 6 Polarization: -0.55 SS G_CDS: -4.55 Total: -5.09 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.13 Total: -0.27 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.36 Total: -4.57 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.07 Total: -4.86 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -10.81 -10.90 -21.71 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.277 kcal (2) G-P(sol) polarization free energy of solvation -10.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.470 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.712 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds