Wall clock time and date at job start Sun Mar 7 2021 02:33:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.34449 * 126.48410 * 104.68584 * 4 2 1 6 6 N 1.36565 * 109.98538 * 179.87144 * 5 4 2 7 7 C 1.37827 * 109.86178 * 0.41058 * 6 5 4 8 8 C 1.38638 * 133.38375 * 179.73415 * 7 6 5 9 9 C 1.39325 * 119.66836 * 180.02562 * 8 7 6 10 10 C 1.47578 * 119.83230 * 179.97438 * 9 8 7 11 11 O 1.21582 * 120.00211 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99698 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99903 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.85056 * 334.66462 * 13 12 10 15 15 C 1.53784 * 113.61697 * 105.86317 * 13 12 10 16 16 C 1.53952 * 87.01975 * 139.95447 * 15 13 12 17 17 H 1.08991 * 113.61965 * 89.20099 * 16 15 13 18 18 C 1.53006 * 113.66385 * 220.07031 * 16 15 13 19 19 N 1.46503 * 109.46914 * 272.55926 * 18 16 15 20 20 C 1.34940 * 126.03886 * 124.71862 * 19 18 16 21 21 C 1.35318 * 107.74643 * 179.83643 * 20 19 18 22 22 C 1.39863 * 107.91807 * 0.42182 * 21 20 19 23 23 N 1.30835 * 108.20320 * 359.73928 * 22 21 20 24 24 C 1.53782 * 113.61514 * 203.47286 * 13 12 10 25 25 C 1.40202 * 120.33417 * 359.97438 * 9 8 7 26 26 C 1.36231 * 120.37661 * 0.02562 * 25 9 8 27 27 C 1.39871 * 119.96074 * 359.97438 * 26 25 9 28 28 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 29 29 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 30 30 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 31 31 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 32 32 H 1.08009 * 125.00726 * 0.02562 * 5 4 2 33 33 H 0.96996 * 125.06856 * 180.13365 * 6 5 4 34 34 H 1.07995 * 120.17130 * 0.02562 * 8 7 6 35 35 H 0.97003 * 120.00340 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61535 * 254.53174 * 15 13 12 37 37 H 1.09002 * 113.61545 * 25.43024 * 15 13 12 38 38 H 1.08999 * 109.47377 * 32.55599 * 18 16 15 39 39 H 1.09000 * 109.46894 * 152.56144 * 18 16 15 40 40 H 1.08001 * 126.12841 * 359.97438 * 20 19 18 41 41 H 1.08001 * 126.04036 * 180.15383 * 21 20 19 42 42 H 1.08003 * 125.89607 * 179.71161 * 22 21 20 43 43 H 1.09000 * 113.61596 * 334.56058 * 24 13 12 44 44 H 1.08999 * 113.61783 * 105.38748 * 24 13 12 45 45 H 1.08000 * 119.81199 * 180.02562 * 25 9 8 46 46 H 1.08006 * 120.02167 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4562 -0.1360 -2.3270 6 7 2.8026 -1.0947 -3.2357 7 6 2.4940 -2.3432 -2.7400 8 6 2.6298 -3.6279 -3.2432 9 6 2.2119 -4.7155 -2.4793 10 6 2.3542 -6.0845 -3.0116 11 8 2.8356 -6.2612 -4.1140 12 7 1.9505 -7.1390 -2.2757 13 6 2.0923 -8.4981 -2.8038 14 1 2.1065 -8.5295 -3.8933 15 6 3.2315 -9.2976 -2.1496 16 6 2.2868 -10.5129 -2.1781 17 1 2.3544 -11.0971 -3.0958 18 6 2.3592 -11.3767 -0.9172 19 7 3.4206 -12.3749 -1.0694 20 6 4.4577 -12.5656 -0.2274 21 6 5.2068 -13.5797 -0.7188 22 6 4.6123 -14.0175 -1.9067 23 7 3.5415 -13.2960 -2.1179 24 6 1.1216 -9.5092 -2.1712 25 6 1.6568 -4.5159 -1.2074 26 6 1.5197 -3.2569 -0.7054 27 6 1.9346 -2.1549 -1.4602 28 1 -0.3932 0.4418 0.7651 29 1 1.7924 -0.5139 0.8900 30 1 1.5615 2.4679 -1.2085 31 1 1.5881 2.4585 1.2242 32 1 2.5870 0.9269 -2.4673 33 1 3.2022 -0.9225 -4.1026 34 1 3.0574 -3.7849 -4.2224 35 1 1.5668 -6.9981 -1.3960 36 1 4.1083 -9.4099 -2.7873 37 1 3.4793 -8.9607 -1.1430 38 1 2.5755 -10.7448 -0.0558 39 1 1.4047 -11.8812 -0.7673 40 1 4.6535 -12.0099 0.6778 41 1 6.1073 -13.9776 -0.2747 42 1 4.9748 -14.8134 -2.5404 43 1 0.7916 -9.2304 -1.1705 44 1 0.2969 -9.7912 -2.8257 45 1 1.3360 -5.3651 -0.6222 46 1 1.0910 -3.1097 0.2750 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:13 Heat of formation + Delta-G solvation = 107.826875 kcal Electronic energy + Delta-G solvation = -29266.155915 eV Core-core repulsion = 25125.693154 eV Total energy + Delta-G solvation = -4140.462761 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.45809 -42.02799 -41.12294 -39.57490 -37.89756 -37.48287 -35.13515 -33.52306 -33.34528 -30.98403 -30.76983 -30.56796 -28.46917 -26.85586 -26.51732 -25.27939 -23.62734 -23.47620 -22.01590 -21.59499 -21.40825 -20.66670 -20.42951 -19.21472 -18.48196 -18.38757 -18.09881 -17.48921 -17.08689 -16.36540 -16.31040 -15.98905 -15.83263 -15.70918 -15.29888 -15.11575 -15.03500 -14.76034 -14.73207 -14.56572 -14.38958 -14.16514 -13.86364 -13.70181 -13.61989 -13.37693 -13.18405 -12.96528 -12.65702 -12.56984 -12.31782 -12.16590 -11.91985 -11.86192 -11.54357 -11.45275 -10.87012 -10.72570 -10.41038 -10.25424 -10.05081 -9.42752 -9.33256 -8.79662 -5.01033 -0.24114 0.40623 1.05266 1.25015 1.36696 1.53255 1.61420 1.87792 1.91751 2.01632 2.03992 2.25079 2.93105 3.29704 3.39121 3.44504 3.46004 3.59340 3.69896 3.72315 3.80251 3.87468 3.96616 3.97984 4.07520 4.08525 4.24258 4.26787 4.38463 4.39130 4.48812 4.50693 4.57903 4.61791 4.66515 4.73168 4.81428 4.89210 4.93944 4.95835 4.99894 5.18068 5.20093 5.25624 5.44097 5.45861 5.56274 5.62073 5.81474 6.00072 6.14297 6.38598 6.48914 6.50173 6.86402 7.25266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.680 3.320 4 C -0.164 4.164 5 C 0.080 3.920 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.055 4.055 9 C -0.123 4.123 10 C 0.565 3.435 11 O -0.537 6.537 12 N -0.717 5.717 13 C 0.126 3.874 14 H 0.118 0.882 15 C -0.146 4.146 16 C -0.120 4.120 17 H 0.110 0.890 18 C 0.146 3.854 19 N -0.370 5.370 20 C 0.052 3.948 21 C -0.275 4.275 22 C 0.044 3.956 23 N -0.295 5.295 24 C -0.137 4.137 25 C -0.113 4.113 26 C -0.072 4.072 27 C -0.062 4.062 28 H 0.377 0.623 29 H 0.073 0.927 30 H -0.255 1.255 31 H -0.260 1.260 32 H 0.177 0.823 33 H 0.423 0.577 34 H 0.136 0.864 35 H 0.401 0.599 36 H 0.074 0.926 37 H 0.086 0.914 38 H 0.096 0.904 39 H 0.087 0.913 40 H 0.172 0.828 41 H 0.147 0.853 42 H 0.182 0.818 43 H 0.090 0.910 44 H 0.083 0.917 45 H 0.125 0.875 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.321 3.087 5.671 6.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.148 4.148 3 Si 0.581 3.419 4 C -0.172 4.172 5 C -0.049 4.049 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.127 4.127 10 C 0.353 3.647 11 O -0.415 6.415 12 N -0.368 5.368 13 C 0.021 3.979 14 H 0.136 0.864 15 C -0.185 4.185 16 C -0.140 4.140 17 H 0.128 0.872 18 C 0.024 3.976 19 N -0.153 5.153 20 C -0.094 4.094 21 C -0.305 4.305 22 C -0.142 4.142 23 N -0.117 5.117 24 C -0.176 4.176 25 C -0.133 4.133 26 C -0.091 4.091 27 C -0.067 4.067 28 H 0.224 0.776 29 H 0.091 0.909 30 H -0.179 1.179 31 H -0.184 1.184 32 H 0.194 0.806 33 H 0.261 0.739 34 H 0.154 0.846 35 H 0.237 0.763 36 H 0.093 0.907 37 H 0.104 0.896 38 H 0.115 0.885 39 H 0.106 0.894 40 H 0.189 0.811 41 H 0.164 0.836 42 H 0.199 0.801 43 H 0.109 0.891 44 H 0.102 0.898 45 H 0.143 0.857 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.493 3.851 3.450 5.194 hybrid contribution -0.367 -0.123 1.200 1.261 sum 0.126 3.728 4.650 5.961 Atomic orbital electron populations 1.86644 1.18262 1.79963 1.49516 1.24012 0.83893 1.09863 0.97029 0.95227 0.91512 0.74481 0.80657 1.19502 1.09515 0.91344 0.96824 1.21755 0.99771 0.94428 0.88903 1.41696 1.54703 1.03981 1.18161 1.18059 1.03283 0.86324 0.94759 1.20080 0.99353 0.88059 1.00119 1.19418 1.05161 0.92317 0.95853 1.18199 0.77319 0.84609 0.84588 1.90794 1.44250 1.86214 1.20218 1.45865 1.64328 1.05750 1.20855 1.22459 0.96005 0.79255 1.00137 0.86439 1.23594 0.98102 0.94898 1.01895 1.22738 0.97312 0.94672 0.99262 0.87196 1.21739 0.89365 0.87978 0.98488 1.48706 1.20743 1.27716 1.18111 1.22579 0.89864 0.99721 0.97266 1.21554 1.05430 1.03288 1.00198 1.23926 0.93425 0.99530 0.97329 1.77338 1.20929 1.04241 1.09162 1.23368 0.97177 0.94912 1.02130 1.20653 1.00699 0.97249 0.94725 1.20157 0.98805 0.90488 0.99630 1.19167 1.00922 0.93015 0.93623 0.77580 0.90924 1.17926 1.18435 0.80629 0.73923 0.84585 0.76277 0.90718 0.89555 0.88537 0.89434 0.81104 0.83562 0.80061 0.89113 0.89838 0.85722 0.85347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.52 12.86 -35.23 -0.45 -0.97 16 2 C -0.04 0.02 3.05 36.01 0.11 0.13 16 3 Si 0.68 -1.30 30.80 -169.99 -5.24 -6.54 16 4 C -0.16 -0.17 5.60 -102.74 -0.58 -0.74 16 5 C 0.08 -0.05 10.43 -16.78 -0.18 -0.23 16 6 N -0.58 0.34 6.07 -10.68 -0.06 0.28 16 7 C 0.08 0.15 7.26 -84.00 -0.61 -0.46 16 8 C -0.05 -0.13 9.61 -39.03 -0.37 -0.50 16 9 C -0.12 -0.25 5.87 -104.95 -0.62 -0.86 16 10 C 0.56 1.67 7.76 -12.45 -0.10 1.57 16 11 O -0.54 -3.60 15.93 5.29 0.08 -3.52 16 12 N -0.72 0.23 5.31 -54.04 -0.29 -0.06 16 13 C 0.13 -0.04 4.21 -67.12 -0.28 -0.33 16 14 H 0.12 0.21 7.50 -51.93 -0.39 -0.18 16 15 C -0.15 0.10 7.45 -25.83 -0.19 -0.09 16 16 C -0.12 0.16 3.87 -89.71 -0.35 -0.19 16 17 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 18 C 0.15 -0.25 6.35 -4.04 -0.03 -0.27 16 19 N -0.37 -0.51 3.68 -61.36 -0.23 -0.73 16 20 C 0.05 0.02 11.45 -17.23 -0.20 -0.18 16 21 C -0.28 -0.34 10.80 -40.01 -0.43 -0.77 16 22 C 0.04 0.10 12.02 -17.37 -0.21 -0.11 16 23 N -0.30 -1.11 12.27 30.62 0.38 -0.74 16 24 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 25 C -0.11 -0.01 9.46 -39.57 -0.37 -0.38 16 26 C -0.07 -0.07 10.03 -39.69 -0.40 -0.46 16 27 C -0.06 -0.13 6.35 -105.04 -0.67 -0.80 16 28 H 0.38 -1.16 8.74 45.56 0.40 -0.76 16 29 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 30 H -0.25 -0.16 7.04 56.52 0.40 0.23 16 31 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 32 H 0.18 -0.59 6.31 -52.48 -0.33 -0.92 16 33 H 0.42 -1.46 8.96 -40.82 -0.37 -1.82 16 34 H 0.14 0.29 7.62 -52.49 -0.40 -0.11 16 35 H 0.40 -1.23 6.70 -40.82 -0.27 -1.51 16 36 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 37 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 38 H 0.10 -0.40 7.78 -51.93 -0.40 -0.80 16 39 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.17 -0.50 8.06 -52.49 -0.42 -0.92 16 41 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 42 H 0.18 -0.06 8.06 -52.48 -0.42 -0.48 16 43 H 0.09 -0.41 8.07 -51.93 -0.42 -0.83 16 44 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.12 -0.37 6.36 -52.49 -0.33 -0.71 16 46 H 0.13 -0.08 8.06 -52.48 -0.42 -0.50 16 LS Contribution 388.54 15.07 5.86 5.86 Total: 0.00 -11.87 388.54 -11.52 -23.39 By element: Atomic # 1 Polarization: -6.56 SS G_CDS: -5.92 Total: -12.47 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: -5.66 Total: -4.50 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.20 Total: -1.25 kcal Atomic # 8 Polarization: -4.12 SS G_CDS: -0.37 Total: -4.49 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.24 Total: -6.54 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.87 -11.52 -23.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.221 kcal (2) G-P(sol) polarization free energy of solvation -11.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.523 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.394 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds