Wall clock time and date at job start Sun Mar 7 2021 02:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86294 * 109.46785 * 2 1 4 4 C 1.50697 * 109.46912 * 119.99860 * 2 1 3 5 5 C 1.37942 * 119.92213 * 65.28325 * 4 2 1 6 6 C 1.39597 * 119.87285 * 180.27132 * 5 4 2 7 7 C 1.47851 * 120.14042 * 179.72156 * 6 5 4 8 8 O 1.21548 * 119.99955 * 359.72237 * 7 6 5 9 9 N 1.34778 * 120.00251 * 179.73022 * 7 6 5 10 10 C 1.46490 * 120.00071 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85394 * 23.79887 * 10 9 7 12 12 C 1.53784 * 113.61427 * 154.99934 * 10 9 7 13 13 C 1.53776 * 87.08333 * 139.97986 * 12 10 9 14 14 H 1.09003 * 113.61805 * 89.19956 * 13 12 10 15 15 C 1.53002 * 113.61417 * 220.01648 * 13 12 10 16 16 N 1.46506 * 109.47035 * 184.99705 * 15 13 12 17 17 C 1.34944 * 126.03372 * 125.00124 * 16 15 13 18 18 C 1.35317 * 107.74658 * 179.97438 * 17 16 15 19 19 C 1.39871 * 107.91935 * 0.02562 * 18 17 16 20 20 N 1.30845 * 108.20108 * 359.74200 * 19 18 17 21 21 C 1.53779 * 87.08338 * 334.56558 * 13 12 10 22 22 C 1.39547 * 119.72361 * 359.44882 * 6 5 4 23 23 C 1.38073 * 119.83526 * 0.27646 * 22 6 5 24 24 Br 1.89106 * 119.93413 * 179.97438 * 23 22 6 25 25 C 1.38365 * 119.92168 * 245.00033 * 4 2 1 26 26 H 0.96699 * 114.00036 * 299.99752 * 1 2 3 27 27 H 1.08998 * 109.47003 * 240.00151 * 2 1 3 28 28 H 1.48503 * 110.00312 * 299.99938 * 3 2 1 29 29 H 1.48505 * 109.99967 * 61.31778 * 3 2 1 30 30 H 1.08001 * 120.06349 * 359.97438 * 5 4 2 31 31 H 0.97008 * 119.99839 * 359.97438 * 9 7 6 32 32 H 1.09001 * 113.61609 * 25.42762 * 12 10 9 33 33 H 1.09005 * 113.61238 * 254.52643 * 12 10 9 34 34 H 1.09004 * 109.46930 * 64.99935 * 15 13 12 35 35 H 1.09000 * 109.47312 * 304.99879 * 15 13 12 36 36 H 1.08005 * 126.12990 * 359.96230 * 17 16 15 37 37 H 1.08002 * 126.04160 * 179.97438 * 18 17 16 38 38 H 1.07995 * 125.90070 * 179.97438 * 19 18 17 39 39 H 1.08993 * 113.61704 * 139.97781 * 21 13 12 40 40 H 1.08991 * 113.61544 * 270.88955 * 21 13 12 41 41 H 1.07997 * 120.08305 * 180.29677 * 22 6 5 42 42 H 1.08002 * 119.85589 * 0.02778 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6894 -2.0586 1.3936 6 6 2.1502 -2.7144 2.5365 7 6 1.8888 -4.1579 2.7204 8 8 1.2672 -4.7751 1.8777 9 7 2.3397 -4.7895 3.8223 10 6 2.0803 -6.2197 4.0047 11 1 1.9026 -6.7410 3.0641 12 6 3.1039 -6.9205 4.9135 13 6 1.9214 -7.7015 5.5106 14 1 1.7001 -8.6295 4.9832 15 6 2.0124 -7.8871 7.0266 16 7 0.9108 -8.7392 7.4813 17 6 1.0305 -9.8766 8.1975 18 6 -0.2145 -10.3607 8.4139 19 6 -1.1262 -9.4896 7.8087 20 7 -0.4530 -8.5144 7.2537 21 6 1.0302 -6.5222 5.0867 22 6 2.8635 -2.0030 3.5022 23 6 3.1040 -0.6551 3.3242 24 35 4.0698 0.3118 4.6314 25 6 2.6392 -0.0100 2.1911 26 1 -0.3933 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2085 29 1 1.5877 2.4585 1.2243 30 1 1.1403 -2.6047 0.6408 31 1 2.8361 -4.2970 4.4947 32 1 3.5879 -6.2503 5.6240 33 1 3.8120 -7.5473 4.3715 34 1 1.9461 -6.9154 7.5162 35 1 2.9631 -8.3569 7.2788 36 1 1.9544 -10.3211 8.5371 37 1 -0.4606 -11.2611 8.9572 38 1 -2.2004 -9.6005 7.8037 39 1 0.0643 -6.8274 4.6845 40 1 0.9472 -5.7432 5.8445 41 1 3.2269 -2.5056 4.3863 42 1 2.8295 1.0446 2.0565 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:39 Heat of formation + Delta-G solvation = 76.740353 kcal Electronic energy + Delta-G solvation = -26685.008872 eV Core-core repulsion = 22680.795907 eV Total energy + Delta-G solvation = -4004.212965 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.052 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.08162 -41.65033 -40.58592 -39.29122 -37.82499 -35.31005 -33.85645 -33.68054 -32.74518 -30.93352 -30.53304 -28.65059 -27.10777 -26.86108 -25.82476 -23.68630 -22.88738 -21.92782 -21.69287 -21.47527 -20.75525 -19.17278 -18.37006 -17.94159 -17.74249 -17.38166 -16.70805 -16.60201 -16.43783 -16.05943 -15.73942 -15.65979 -15.30910 -15.03155 -14.94468 -14.86802 -14.31081 -14.27204 -13.96935 -13.68964 -13.58171 -13.50540 -13.33728 -13.07345 -13.04661 -12.33445 -12.31441 -12.03063 -11.95546 -11.83695 -11.60876 -11.51686 -11.42308 -11.09551 -10.73008 -10.39514 -10.29928 -10.11857 -9.96753 -9.47620 -5.08652 -0.54866 -0.22448 0.35233 1.01738 1.11322 1.46316 1.53959 1.58070 1.84555 1.97239 2.00907 2.45355 3.15036 3.17959 3.24780 3.29135 3.37015 3.52169 3.64726 3.71593 3.79759 3.90512 3.91402 3.94063 4.05395 4.14519 4.15593 4.22185 4.26372 4.46155 4.50343 4.57359 4.63826 4.68484 4.73038 4.82781 4.88359 4.91162 5.01606 5.04467 5.10456 5.15739 5.32407 5.43459 5.78337 6.10504 6.27123 6.31714 6.83717 7.05649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.682 3.318 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.562 3.438 8 O -0.525 6.525 9 N -0.715 5.715 10 C 0.122 3.878 11 H 0.119 0.881 12 C -0.138 4.138 13 C -0.118 4.118 14 H 0.101 0.899 15 C 0.145 3.855 16 N -0.373 5.373 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.042 3.958 20 N -0.289 5.289 21 C -0.134 4.134 22 C -0.053 4.053 23 C -0.094 4.094 24 Br -0.033 7.033 25 C -0.065 4.065 26 H 0.377 0.623 27 H 0.126 0.874 28 H -0.250 1.250 29 H -0.256 1.256 30 H 0.148 0.852 31 H 0.400 0.600 32 H 0.091 0.909 33 H 0.083 0.917 34 H 0.086 0.914 35 H 0.099 0.901 36 H 0.172 0.828 37 H 0.147 0.853 38 H 0.182 0.818 39 H 0.078 0.922 40 H 0.086 0.914 41 H 0.138 0.862 42 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.891 -0.068 3.361 6.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.582 3.418 4 C -0.118 4.118 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.349 3.651 8 O -0.402 6.402 9 N -0.366 5.366 10 C 0.017 3.983 11 H 0.137 0.863 12 C -0.177 4.177 13 C -0.138 4.138 14 H 0.119 0.881 15 C 0.024 3.976 16 N -0.155 5.155 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.144 4.144 20 N -0.111 5.111 21 C -0.173 4.173 22 C -0.074 4.074 23 C -0.174 4.174 24 Br 0.053 6.947 25 C -0.085 4.085 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.175 1.175 29 H -0.180 1.180 30 H 0.166 0.834 31 H 0.236 0.764 32 H 0.110 0.890 33 H 0.101 0.899 34 H 0.104 0.896 35 H 0.117 0.883 36 H 0.190 0.810 37 H 0.164 0.836 38 H 0.199 0.801 39 H 0.097 0.903 40 H 0.105 0.895 41 H 0.156 0.844 42 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.738 1.544 1.975 6.262 hybrid contribution -0.916 -1.028 1.286 1.884 sum 4.822 0.516 3.261 5.844 Atomic orbital electron populations 1.86653 1.17151 1.79899 1.49325 1.25060 0.84355 1.11112 0.97864 0.95046 0.91549 0.74262 0.80920 1.20311 0.99830 0.94476 0.97219 1.21316 0.93516 0.93125 0.95639 1.19978 1.02673 0.93844 0.96696 1.18138 0.78929 0.86353 0.81667 1.90827 1.39631 1.67079 1.42652 1.45883 1.57593 1.10429 1.22714 1.22581 0.96327 0.80210 0.99149 0.86296 1.23391 0.96606 0.98985 0.98674 1.22625 0.97714 0.99281 0.94159 0.88115 1.21735 0.86398 0.94903 0.94605 1.48727 1.05544 1.19284 1.41984 1.22606 1.00419 0.89305 0.97259 1.21562 0.91676 1.05154 1.11970 1.23956 1.00566 0.92742 0.97157 1.77400 0.86420 1.23501 1.23764 1.23448 0.98795 0.96982 0.98042 1.21275 0.95472 0.92341 0.98291 1.21640 1.04114 0.95042 0.96601 1.96845 1.72425 1.73614 1.51850 1.21273 0.95156 1.00276 0.91791 0.77475 0.85674 1.17493 1.18029 0.83397 0.76395 0.89045 0.89879 0.89613 0.88325 0.81037 0.83552 0.80100 0.90292 0.89508 0.84431 0.84018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.38 12.83 -35.23 -0.45 -0.84 16 2 C -0.07 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.68 -1.16 29.87 -169.99 -5.08 -6.24 16 4 C -0.12 0.07 5.34 -104.69 -0.56 -0.49 16 5 C -0.02 -0.01 9.23 -39.18 -0.36 -0.37 16 6 C -0.13 -0.05 5.87 -104.97 -0.62 -0.67 16 7 C 0.56 1.03 7.77 -12.33 -0.10 0.93 16 8 O -0.53 -3.03 15.95 5.32 0.08 -2.94 16 9 N -0.71 0.82 5.31 -53.96 -0.29 0.54 16 10 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 11 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 12 C -0.14 0.50 7.39 -25.92 -0.19 0.30 16 13 C -0.12 0.24 3.83 -89.81 -0.34 -0.10 16 14 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 15 C 0.14 -0.33 6.35 -4.04 -0.03 -0.35 16 16 N -0.37 -0.34 3.68 -61.36 -0.23 -0.56 16 17 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 18 C -0.27 -0.24 10.80 -40.01 -0.43 -0.67 16 19 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 20 N -0.29 -0.95 12.42 30.63 0.38 -0.57 16 21 C -0.13 0.07 7.43 -25.92 -0.19 -0.12 16 22 C -0.05 0.07 9.28 -39.15 -0.36 -0.29 16 23 C -0.09 0.08 6.22 -39.57 -0.25 -0.16 16 24 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 25 C -0.07 0.07 8.40 -39.47 -0.33 -0.26 16 26 H 0.38 -0.81 8.70 45.56 0.40 -0.42 16 27 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 28 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 29 H -0.26 0.00 7.00 56.52 0.40 0.40 16 30 H 0.15 0.26 7.65 -52.49 -0.40 -0.14 16 31 H 0.40 -1.54 6.76 -40.82 -0.28 -1.81 16 32 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 33 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 34 H 0.09 -0.23 7.84 -51.93 -0.41 -0.63 16 35 H 0.10 -0.46 8.07 -51.93 -0.42 -0.88 16 36 H 0.17 -0.57 8.06 -52.48 -0.42 -0.99 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.18 -0.08 8.06 -52.49 -0.42 -0.51 16 39 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 40 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 41 H 0.14 -0.52 6.40 -52.49 -0.34 -0.85 16 42 H 0.14 -0.33 4.82 -52.49 -0.25 -0.58 16 LS Contribution 376.55 15.07 5.67 5.67 Total: 0.00 -9.17 376.55 -11.61 -20.78 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -5.07 Total: -10.76 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -4.35 Total: -2.81 kcal Atomic # 7 Polarization: -0.47 SS G_CDS: -0.13 Total: -0.60 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.37 Total: -3.78 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.08 Total: -6.24 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.17 -11.61 -20.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.519 kcal (2) G-P(sol) polarization free energy of solvation -9.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.779 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds