Wall clock time and date at job start Sun Mar 7 2021 02:33:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47155 * 2 1 4 4 C 1.50700 * 109.46907 * 240.00043 * 2 1 3 5 5 C 1.38403 * 119.82683 * 299.99444 * 4 2 1 6 6 C 1.37888 * 120.17000 * 179.97438 * 5 4 2 7 7 C 1.39841 * 119.82516 * 0.02562 * 6 5 4 8 8 C 1.47205 * 120.16614 * 179.97438 * 7 6 5 9 9 C 1.34808 * 119.99857 * 179.97438 * 8 7 6 10 10 C 1.46433 * 120.00203 * 180.02562 * 9 8 7 11 11 O 1.21693 * 119.99711 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00166 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00221 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.90387 * 23.74512 * 13 12 10 15 15 C 1.53781 * 113.61630 * 154.99518 * 13 12 10 16 16 C 1.53781 * 87.08070 * 139.98148 * 15 13 12 17 17 H 1.09002 * 113.61445 * 89.11830 * 16 15 13 18 18 C 1.53003 * 113.61337 * 219.93686 * 16 15 13 19 19 N 1.46504 * 109.46983 * 183.46996 * 18 16 15 20 20 C 1.34948 * 126.03354 * 124.99884 * 19 18 16 21 21 C 1.35320 * 107.73963 * 179.97438 * 20 19 18 22 22 C 1.39870 * 107.92393 * 359.97438 * 21 20 19 23 23 N 1.30838 * 108.20086 * 359.74688 * 22 21 20 24 24 C 1.53786 * 87.17350 * 334.52830 * 16 15 13 25 25 C 1.39832 * 119.66090 * 0.24981 * 7 6 5 26 26 C 1.37894 * 119.82436 * 359.51509 * 25 7 6 27 27 H 0.96700 * 114.00337 * 299.99743 * 1 2 3 28 28 H 1.08997 * 109.47054 * 119.99819 * 2 1 3 29 29 H 1.48505 * 109.99733 * 300.00347 * 3 2 1 30 30 H 1.48502 * 110.00174 * 61.31604 * 3 2 1 31 31 H 1.08000 * 119.91747 * 359.97438 * 5 4 2 32 32 H 1.07999 * 120.08884 * 180.02562 * 6 5 4 33 33 H 1.08004 * 120.00545 * 0.02562 * 8 7 6 34 34 H 1.07998 * 120.00287 * 0.02562 * 9 8 7 35 35 H 0.97001 * 119.99917 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61181 * 25.43203 * 15 13 12 37 37 H 1.09000 * 113.69133 * 254.54030 * 15 13 12 38 38 H 1.09000 * 109.47107 * 303.47037 * 18 16 15 39 39 H 1.08997 * 109.47112 * 63.47187 * 18 16 15 40 40 H 1.07994 * 126.13198 * 359.95695 * 20 19 18 41 41 H 1.08004 * 126.03483 * 179.97438 * 21 20 19 42 42 H 1.08001 * 125.89828 * 179.97438 * 22 21 20 43 43 H 1.08992 * 113.61675 * 140.02412 * 24 16 15 44 44 H 1.09000 * 113.60973 * 270.92699 * 24 16 15 45 45 H 1.07997 * 120.08653 * 179.74965 * 25 7 6 46 46 H 1.08002 * 119.91011 * 180.23547 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5948 -2.0355 -1.4459 6 6 2.0501 -2.6922 -2.5696 7 6 2.8541 -2.0160 -3.4925 8 6 3.3447 -2.7100 -4.6944 9 6 4.1192 -2.0547 -5.5822 10 6 4.6069 -2.7448 -6.7781 11 8 4.3133 -3.9100 -6.9703 12 7 5.3816 -2.0898 -7.6653 13 6 5.8699 -2.7803 -8.8615 14 1 5.2479 -3.6296 -9.1447 15 6 6.1907 -1.8347 -10.0309 16 6 7.4226 -2.7146 -10.3015 17 1 7.2252 -3.5459 -10.9784 18 6 8.6716 -1.9190 -10.6861 19 7 9.7620 -2.8447 -11.0027 20 6 10.4730 -2.8714 -12.1494 21 6 11.3829 -3.8678 -12.0473 22 6 11.2229 -4.4702 -10.7952 23 7 10.2553 -3.8540 -10.1658 24 6 7.3748 -3.1060 -8.8151 25 6 3.1945 -0.6790 -3.2648 26 6 2.7274 -0.0346 -2.1387 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 0.9741 -2.5565 -0.7320 32 1 1.7864 -3.7262 -2.7366 33 1 3.0836 -3.7439 -4.8656 34 1 4.3801 -1.0207 -5.4114 35 1 5.6159 -1.1611 -7.5118 36 1 6.4389 -0.8208 -9.7171 37 1 5.4511 -1.8610 -10.8311 38 1 8.4548 -1.3012 -11.5575 39 1 8.9669 -1.2812 -9.8529 40 1 10.3395 -2.2153 -12.9968 41 1 12.1051 -4.1482 -12.7998 42 1 11.8008 -5.2984 -10.4124 43 1 7.5898 -4.1590 -8.6337 44 1 7.9461 -2.4389 -8.1695 45 1 3.8184 -0.1513 -3.9710 46 1 2.9862 0.9992 -1.9634 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:48 Heat of formation + Delta-G solvation = 86.531945 kcal Electronic energy + Delta-G solvation = -26897.075491 eV Core-core repulsion = 22949.341365 eV Total energy + Delta-G solvation = -3947.734127 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.02951 -41.11359 -40.57423 -39.41427 -37.89029 -35.19339 -35.02780 -33.48462 -32.24938 -31.34779 -30.89725 -28.65202 -27.18229 -26.78466 -24.84855 -24.03344 -23.19523 -21.94655 -21.89004 -21.40728 -21.04596 -20.13661 -18.64860 -18.55173 -18.27398 -17.43120 -17.21848 -16.67990 -16.48591 -16.20622 -15.86096 -15.67291 -15.42972 -15.31125 -14.99943 -14.88343 -14.69514 -14.38002 -14.06953 -13.97213 -13.85416 -13.63605 -13.58988 -13.54692 -13.43294 -13.01947 -12.97674 -12.34398 -12.22557 -12.07428 -11.90304 -11.75506 -11.56301 -11.37766 -11.30751 -10.84804 -10.56125 -10.27309 -10.01139 -9.99586 -9.45052 -9.24115 -5.03425 -0.53770 0.36764 0.91739 1.04371 1.21199 1.53153 1.60699 1.89086 2.03259 2.22147 2.30812 2.76108 3.23876 3.24783 3.37234 3.52372 3.61996 3.70898 3.72454 3.78248 3.86522 3.94915 3.96990 4.08509 4.14134 4.15758 4.23256 4.25819 4.29340 4.33499 4.49285 4.57516 4.63469 4.70849 4.75928 4.80298 4.89165 4.93613 4.94783 5.06576 5.10443 5.12851 5.17617 5.21100 5.36890 5.46111 5.56856 5.59788 5.80845 5.85677 6.13158 6.35761 6.53856 6.86338 7.28835 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.079 4.079 3 Si 0.682 3.318 4 C -0.061 4.061 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.074 4.074 8 C -0.014 4.014 9 C -0.216 4.216 10 C 0.549 3.451 11 O -0.543 6.543 12 N -0.717 5.717 13 C 0.122 3.878 14 H 0.116 0.884 15 C -0.138 4.138 16 C -0.119 4.119 17 H 0.099 0.901 18 C 0.145 3.855 19 N -0.372 5.372 20 C 0.050 3.950 21 C -0.274 4.274 22 C 0.042 3.958 23 N -0.289 5.289 24 C -0.133 4.133 25 C -0.095 4.095 26 C -0.117 4.117 27 H 0.381 0.619 28 H 0.079 0.921 29 H -0.255 1.255 30 H -0.260 1.260 31 H 0.129 0.871 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.402 0.598 36 H 0.091 0.909 37 H 0.081 0.919 38 H 0.098 0.902 39 H 0.086 0.914 40 H 0.172 0.828 41 H 0.146 0.854 42 H 0.182 0.818 43 H 0.077 0.923 44 H 0.086 0.914 45 H 0.133 0.867 46 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.485 5.200 -0.040 5.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.189 4.189 3 Si 0.583 3.417 4 C -0.061 4.061 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.033 4.033 9 C -0.237 4.237 10 C 0.338 3.662 11 O -0.422 6.422 12 N -0.367 5.367 13 C 0.017 3.983 14 H 0.134 0.866 15 C -0.176 4.176 16 C -0.139 4.139 17 H 0.117 0.883 18 C 0.024 3.976 19 N -0.155 5.155 20 C -0.096 4.096 21 C -0.304 4.304 22 C -0.144 4.144 23 N -0.111 5.111 24 C -0.172 4.172 25 C -0.112 4.112 26 C -0.134 4.134 27 H 0.229 0.771 28 H 0.097 0.903 29 H -0.179 1.179 30 H -0.186 1.186 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.155 0.845 34 H 0.148 0.852 35 H 0.236 0.764 36 H 0.109 0.891 37 H 0.099 0.901 38 H 0.116 0.884 39 H 0.104 0.896 40 H 0.189 0.811 41 H 0.164 0.836 42 H 0.199 0.801 43 H 0.096 0.904 44 H 0.104 0.896 45 H 0.150 0.850 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.346 5.067 0.357 5.255 hybrid contribution -0.429 0.325 -0.252 0.594 sum 0.918 5.392 0.105 5.471 Atomic orbital electron populations 1.86587 1.17658 1.80207 1.49841 1.24849 0.84606 1.11084 0.98341 0.95086 0.91673 0.74537 0.80402 1.19432 0.97310 0.94303 0.95069 1.20965 0.98715 0.93911 0.97568 1.21448 0.96064 1.00109 0.93362 1.19060 0.99319 0.93981 0.95067 1.22411 0.91106 0.99594 0.90223 1.22893 1.03668 1.01112 0.96011 1.18379 0.77942 0.86479 0.83375 1.90835 1.58002 1.16642 1.76677 1.45833 1.52222 1.15507 1.23091 1.22557 0.95078 0.96481 0.84199 0.86573 1.23373 0.97164 0.98703 0.98405 1.22633 0.93430 0.99280 0.98542 0.88250 1.21734 0.83697 0.89555 1.02644 1.48732 1.27790 1.27015 1.11945 1.22606 0.94756 1.00680 0.91590 1.21559 1.06306 1.02075 1.00449 1.23953 0.96501 1.00078 0.93917 1.77400 1.14251 1.02118 1.17281 1.23476 0.95513 1.03261 0.94902 1.21319 0.99114 0.93738 0.97076 1.20877 0.98763 0.99521 0.94268 0.77106 0.90327 1.17920 1.18562 0.85290 0.85012 0.84466 0.85179 0.76369 0.89100 0.90078 0.88389 0.89618 0.81055 0.83574 0.80101 0.90435 0.89555 0.84972 0.85208 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.48 12.74 -35.23 -0.45 -0.93 16 2 C -0.08 0.04 2.81 36.01 0.10 0.14 16 3 Si 0.68 -0.90 29.77 -169.99 -5.06 -5.96 16 4 C -0.06 -0.05 5.43 -104.50 -0.57 -0.62 16 5 C -0.09 -0.09 9.59 -39.65 -0.38 -0.47 16 6 C -0.09 -0.06 9.80 -39.11 -0.38 -0.44 16 7 C -0.07 -0.05 5.87 -105.06 -0.62 -0.66 16 8 C -0.01 -0.01 9.46 -37.16 -0.35 -0.36 16 9 C -0.22 -0.01 9.41 -37.50 -0.35 -0.36 16 10 C 0.55 1.25 7.74 -12.96 -0.10 1.15 16 11 O -0.54 -3.54 15.83 5.20 0.08 -3.46 16 12 N -0.72 0.46 5.35 -54.27 -0.29 0.17 16 13 C 0.12 -0.04 4.25 -66.98 -0.28 -0.32 16 14 H 0.12 0.22 7.47 -51.93 -0.39 -0.17 16 15 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 16 C -0.12 0.18 3.82 -89.80 -0.34 -0.16 16 17 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 18 C 0.15 -0.28 6.33 -4.04 -0.03 -0.30 16 19 N -0.37 -0.43 3.68 -61.36 -0.23 -0.65 16 20 C 0.05 0.01 11.45 -17.22 -0.20 -0.19 16 21 C -0.27 -0.28 10.80 -40.01 -0.43 -0.72 16 22 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 23 N -0.29 -1.01 12.42 30.62 0.38 -0.63 16 24 C -0.13 0.00 7.45 -25.77 -0.19 -0.19 16 25 C -0.09 0.03 9.41 -39.11 -0.37 -0.33 16 26 C -0.12 0.02 8.65 -39.65 -0.34 -0.33 16 27 H 0.38 -1.17 8.74 45.56 0.40 -0.77 16 28 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 29 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 30 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 31 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 32 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 33 H 0.14 0.21 7.52 -52.48 -0.39 -0.19 16 34 H 0.13 -0.38 6.07 -52.49 -0.32 -0.70 16 35 H 0.40 -1.47 8.71 -40.82 -0.36 -1.82 16 36 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 39 H 0.09 -0.20 7.88 -51.93 -0.41 -0.61 16 40 H 0.17 -0.53 8.06 -52.49 -0.42 -0.96 16 41 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 42 H 0.18 -0.07 8.06 -52.49 -0.42 -0.49 16 43 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 44 H 0.09 -0.02 7.92 -51.93 -0.41 -0.43 16 45 H 0.13 -0.37 6.17 -52.49 -0.32 -0.70 16 46 H 0.13 -0.27 4.85 -52.49 -0.25 -0.53 16 LS Contribution 389.84 15.07 5.87 5.87 Total: 0.00 -10.73 389.84 -11.21 -21.95 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -6.29 Total: -12.28 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -5.24 Total: -4.09 kcal Atomic # 7 Polarization: -0.97 SS G_CDS: -0.14 Total: -1.11 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -0.37 Total: -4.38 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.73 -11.21 -21.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.478 kcal (2) G-P(sol) polarization free energy of solvation -10.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.946 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds