Wall clock time and date at job start Sun Mar 7 2021 02:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47155 * 2 1 4 4 C 1.50700 * 109.46907 * 240.00043 * 2 1 3 5 5 C 1.38403 * 119.82683 * 299.99444 * 4 2 1 6 6 C 1.37888 * 120.17000 * 179.97438 * 5 4 2 7 7 C 1.39841 * 119.82516 * 0.02562 * 6 5 4 8 8 C 1.47205 * 120.16614 * 179.97438 * 7 6 5 9 9 C 1.34808 * 119.99857 * 179.97438 * 8 7 6 10 10 C 1.46433 * 120.00203 * 180.02562 * 9 8 7 11 11 O 1.21693 * 119.99711 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00166 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00221 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.90387 * 23.74512 * 13 12 10 15 15 C 1.53781 * 113.61630 * 154.99518 * 13 12 10 16 16 C 1.53781 * 87.08070 * 139.98148 * 15 13 12 17 17 H 1.09002 * 113.61445 * 89.11830 * 16 15 13 18 18 C 1.53003 * 113.61337 * 219.93686 * 16 15 13 19 19 N 1.46504 * 109.46983 * 183.46996 * 18 16 15 20 20 C 1.34948 * 126.03354 * 124.99884 * 19 18 16 21 21 C 1.35320 * 107.73963 * 179.97438 * 20 19 18 22 22 C 1.39870 * 107.92393 * 359.97438 * 21 20 19 23 23 N 1.30838 * 108.20086 * 359.74688 * 22 21 20 24 24 C 1.53786 * 87.17350 * 334.52830 * 16 15 13 25 25 C 1.39832 * 119.66090 * 0.24981 * 7 6 5 26 26 C 1.37894 * 119.82436 * 359.51509 * 25 7 6 27 27 H 0.96700 * 114.00337 * 299.99743 * 1 2 3 28 28 H 1.08997 * 109.47054 * 119.99819 * 2 1 3 29 29 H 1.48505 * 109.99733 * 300.00347 * 3 2 1 30 30 H 1.48502 * 110.00174 * 61.31604 * 3 2 1 31 31 H 1.08000 * 119.91747 * 359.97438 * 5 4 2 32 32 H 1.07999 * 120.08884 * 180.02562 * 6 5 4 33 33 H 1.08004 * 120.00545 * 0.02562 * 8 7 6 34 34 H 1.07998 * 120.00287 * 0.02562 * 9 8 7 35 35 H 0.97001 * 119.99917 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61181 * 25.43203 * 15 13 12 37 37 H 1.09000 * 113.69133 * 254.54030 * 15 13 12 38 38 H 1.09000 * 109.47107 * 303.47037 * 18 16 15 39 39 H 1.08997 * 109.47112 * 63.47187 * 18 16 15 40 40 H 1.07994 * 126.13198 * 359.95695 * 20 19 18 41 41 H 1.08004 * 126.03483 * 179.97438 * 21 20 19 42 42 H 1.08001 * 125.89828 * 179.97438 * 22 21 20 43 43 H 1.08992 * 113.61675 * 140.02412 * 24 16 15 44 44 H 1.09000 * 113.60973 * 270.92699 * 24 16 15 45 45 H 1.07997 * 120.08653 * 179.74965 * 25 7 6 46 46 H 1.08002 * 119.91011 * 180.23547 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5948 -2.0355 -1.4459 6 6 2.0501 -2.6922 -2.5696 7 6 2.8541 -2.0160 -3.4925 8 6 3.3447 -2.7100 -4.6944 9 6 4.1192 -2.0547 -5.5822 10 6 4.6069 -2.7448 -6.7781 11 8 4.3133 -3.9100 -6.9703 12 7 5.3816 -2.0898 -7.6653 13 6 5.8699 -2.7803 -8.8615 14 1 5.2479 -3.6296 -9.1447 15 6 6.1907 -1.8347 -10.0309 16 6 7.4226 -2.7146 -10.3015 17 1 7.2252 -3.5459 -10.9784 18 6 8.6716 -1.9190 -10.6861 19 7 9.7620 -2.8447 -11.0027 20 6 10.4730 -2.8714 -12.1494 21 6 11.3829 -3.8678 -12.0473 22 6 11.2229 -4.4702 -10.7952 23 7 10.2553 -3.8540 -10.1658 24 6 7.3748 -3.1060 -8.8151 25 6 3.1945 -0.6790 -3.2648 26 6 2.7274 -0.0346 -2.1387 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 0.9741 -2.5565 -0.7320 32 1 1.7864 -3.7262 -2.7366 33 1 3.0836 -3.7439 -4.8656 34 1 4.3801 -1.0207 -5.4114 35 1 5.6159 -1.1611 -7.5118 36 1 6.4389 -0.8208 -9.7171 37 1 5.4511 -1.8610 -10.8311 38 1 8.4548 -1.3012 -11.5575 39 1 8.9669 -1.2812 -9.8529 40 1 10.3395 -2.2153 -12.9968 41 1 12.1051 -4.1482 -12.7998 42 1 11.8008 -5.2984 -10.4124 43 1 7.5898 -4.1590 -8.6337 44 1 7.9461 -2.4389 -8.1695 45 1 3.8184 -0.1513 -3.9710 46 1 2.9862 0.9992 -1.9634 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:47 Heat of formation + Delta-G solvation = 86.546974 kcal Electronic energy + Delta-G solvation = -26897.074840 eV Core-core repulsion = 22949.341365 eV Total energy + Delta-G solvation = -3947.733475 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.157 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.03409 -41.18860 -40.54486 -39.48441 -37.87857 -35.19287 -35.12748 -33.50840 -32.22565 -31.34407 -30.91702 -28.62755 -27.16851 -26.70073 -24.84608 -23.99812 -23.20154 -21.98444 -21.88343 -21.45170 -21.00687 -20.13766 -18.66376 -18.54841 -18.24419 -17.41544 -17.25742 -16.65079 -16.45535 -16.17538 -15.98512 -15.70508 -15.44049 -15.32884 -15.02337 -14.82577 -14.71784 -14.35591 -14.06789 -13.96082 -13.85927 -13.59967 -13.53281 -13.46232 -13.40412 -13.02868 -12.94985 -12.33640 -12.20084 -12.05134 -11.83785 -11.75637 -11.60232 -11.36351 -11.34688 -11.03606 -10.51017 -10.32211 -10.07931 -9.98681 -9.46853 -9.23636 -4.93296 -0.56008 0.38935 0.86781 1.03149 1.29299 1.60233 1.69859 1.94528 1.97628 2.19852 2.21199 2.77084 3.34768 3.35996 3.46232 3.55391 3.69345 3.75645 3.78084 3.83644 3.93465 4.00228 4.10421 4.12878 4.20817 4.25128 4.32324 4.33317 4.38821 4.40892 4.54484 4.70986 4.73104 4.78733 4.81995 4.83345 4.93707 4.96328 5.00688 5.05546 5.08561 5.15609 5.17864 5.22685 5.38004 5.47416 5.56912 5.59047 5.77539 5.88744 6.21963 6.55085 6.55780 6.81540 7.21951 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.092 4.092 3 Si 0.768 3.232 4 C -0.075 4.075 5 C -0.109 4.109 6 C -0.104 4.104 7 C -0.083 4.083 8 C -0.022 4.022 9 C -0.207 4.207 10 C 0.540 3.460 11 O -0.597 6.597 12 N -0.699 5.699 13 C 0.113 3.887 14 H 0.087 0.913 15 C -0.113 4.113 16 C -0.112 4.112 17 H 0.081 0.919 18 C 0.139 3.861 19 N -0.376 5.376 20 C 0.052 3.948 21 C -0.294 4.294 22 C 0.025 3.975 23 N -0.331 5.331 24 C -0.133 4.133 25 C -0.093 4.093 26 C -0.123 4.123 27 H 0.395 0.605 28 H 0.095 0.905 29 H -0.296 1.296 30 H -0.289 1.289 31 H 0.129 0.871 32 H 0.137 0.863 33 H 0.120 0.880 34 H 0.167 0.833 35 H 0.420 0.580 36 H 0.120 0.880 37 H 0.088 0.912 38 H 0.131 0.869 39 H 0.094 0.906 40 H 0.207 0.793 41 H 0.159 0.841 42 H 0.192 0.808 43 H 0.042 0.958 44 H 0.092 0.908 45 H 0.161 0.839 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.221 8.002 -0.763 8.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.200 4.200 3 Si 0.673 3.327 4 C -0.076 4.076 5 C -0.127 4.127 6 C -0.122 4.122 7 C -0.083 4.083 8 C -0.042 4.042 9 C -0.228 4.228 10 C 0.331 3.669 11 O -0.480 6.480 12 N -0.349 5.349 13 C 0.008 3.992 14 H 0.105 0.895 15 C -0.151 4.151 16 C -0.132 4.132 17 H 0.100 0.900 18 C 0.019 3.981 19 N -0.159 5.159 20 C -0.094 4.094 21 C -0.323 4.323 22 C -0.161 4.161 23 N -0.154 5.154 24 C -0.171 4.171 25 C -0.111 4.111 26 C -0.141 4.141 27 H 0.246 0.754 28 H 0.113 0.887 29 H -0.223 1.223 30 H -0.216 1.216 31 H 0.147 0.853 32 H 0.155 0.845 33 H 0.138 0.862 34 H 0.184 0.816 35 H 0.258 0.742 36 H 0.138 0.862 37 H 0.107 0.893 38 H 0.149 0.851 39 H 0.112 0.888 40 H 0.224 0.776 41 H 0.177 0.823 42 H 0.209 0.791 43 H 0.061 0.939 44 H 0.111 0.889 45 H 0.178 0.822 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.104 7.889 -0.354 8.172 hybrid contribution -0.684 -0.563 -0.036 0.887 sum 1.420 7.325 -0.390 7.472 Atomic orbital electron populations 1.86543 1.18548 1.80769 1.51070 1.25120 0.84098 1.12199 0.98596 0.94147 0.90234 0.71809 0.76484 1.19717 0.97601 0.94396 0.95850 1.21077 0.99282 0.94430 0.97873 1.21614 0.96371 1.00618 0.93587 1.19117 0.99642 0.94669 0.94859 1.22351 0.91787 0.99130 0.90885 1.23029 1.02854 1.02369 0.94499 1.18843 0.77878 0.85984 0.84234 1.90813 1.60162 1.19053 1.77933 1.45725 1.50818 1.16176 1.22211 1.22524 0.94186 0.96961 0.85538 0.89520 1.23289 0.96011 0.99066 0.96783 1.22500 0.94736 0.99266 0.96668 0.90040 1.22025 0.82365 0.89163 1.04538 1.49001 1.28230 1.26753 1.11923 1.23206 0.93733 1.00494 0.91970 1.21861 1.07319 1.02667 1.00438 1.24314 0.96521 1.00562 0.94674 1.77330 1.15380 1.03699 1.18955 1.23437 0.95792 1.01271 0.96646 1.21642 0.98815 0.93214 0.97402 1.21142 0.98456 1.00370 0.94103 0.75430 0.88692 1.22323 1.21588 0.85265 0.84547 0.86188 0.81576 0.74165 0.86161 0.89304 0.85078 0.88787 0.77589 0.82299 0.79076 0.93926 0.88928 0.82172 0.83358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.10 12.74 -148.98 -1.90 -3.00 16 2 C -0.09 0.11 2.81 71.24 0.20 0.31 16 3 Si 0.77 -2.52 29.77 68.60 2.04 -0.48 16 4 C -0.08 -0.12 5.43 -19.79 -0.11 -0.23 16 5 C -0.11 -0.31 9.59 22.23 0.21 -0.10 16 6 C -0.10 -0.26 9.80 22.57 0.22 -0.04 16 7 C -0.08 -0.13 5.87 -20.15 -0.12 -0.25 16 8 C -0.02 -0.06 9.46 23.84 0.23 0.17 16 9 C -0.21 0.06 9.41 23.62 0.22 0.28 16 10 C 0.54 2.91 7.74 86.38 0.67 3.58 16 11 O -0.60 -9.40 15.83 -4.32 -0.07 -9.47 16 12 N -0.70 1.13 5.35 -443.83 -2.38 -1.25 16 13 C 0.11 0.01 4.25 45.61 0.19 0.20 16 14 H 0.09 0.56 7.47 -2.39 -0.02 0.54 16 15 C -0.11 0.85 7.39 31.12 0.23 1.08 16 16 C -0.11 0.37 3.82 -10.26 -0.04 0.33 16 17 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 18 C 0.14 -0.76 6.33 86.38 0.55 -0.21 16 19 N -0.38 -0.70 3.68 -348.05 -1.28 -1.98 16 20 C 0.05 -0.04 11.45 83.54 0.96 0.92 16 21 C -0.29 -0.61 10.80 21.99 0.24 -0.37 16 22 C 0.02 0.13 12.03 85.24 1.03 1.16 16 23 N -0.33 -2.70 12.42 -57.02 -0.71 -3.41 16 24 C -0.13 -0.16 7.45 31.21 0.23 0.07 16 25 C -0.09 0.18 9.41 22.57 0.21 0.39 16 26 C -0.12 0.15 8.65 22.23 0.19 0.34 16 27 H 0.40 -2.38 8.74 -74.06 -0.65 -3.03 16 28 H 0.10 -0.46 7.96 -2.39 -0.02 -0.47 16 29 H -0.30 -1.06 7.11 99.48 0.71 -0.35 16 30 H -0.29 -0.36 7.11 99.48 0.71 0.35 16 31 H 0.13 0.23 8.06 -2.91 -0.02 0.20 16 32 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 33 H 0.12 0.68 7.52 -2.91 -0.02 0.66 16 34 H 0.17 -1.40 6.07 -2.91 -0.02 -1.41 16 35 H 0.42 -3.94 8.71 -92.71 -0.81 -4.74 16 36 H 0.12 -1.55 8.08 -2.39 -0.02 -1.57 16 37 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 38 H 0.13 -1.58 8.07 -2.39 -0.02 -1.59 16 39 H 0.09 -0.64 7.88 -2.39 -0.02 -0.66 16 40 H 0.21 -1.85 8.06 -2.91 -0.02 -1.87 16 41 H 0.16 -0.27 8.06 -2.91 -0.02 -0.29 16 42 H 0.19 0.18 8.06 -2.91 -0.02 0.16 16 43 H 0.04 0.35 8.14 -2.39 -0.02 0.33 16 44 H 0.09 -0.02 7.92 -2.39 -0.02 -0.04 16 45 H 0.16 -1.36 6.17 -2.91 -0.02 -1.38 16 46 H 0.15 -0.85 4.85 -2.91 -0.01 -0.86 16 Total: 0.00 -29.29 389.84 0.62 -28.67 By element: Atomic # 1 Polarization: -16.33 SS G_CDS: -0.40 Total: -16.73 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: 5.31 Total: 7.64 kcal Atomic # 7 Polarization: -2.27 SS G_CDS: -4.36 Total: -6.63 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: -1.97 Total: -12.46 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.04 Total: -0.48 kcal Total: -29.29 0.62 -28.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.217 kcal (2) G-P(sol) polarization free energy of solvation -29.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.670 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.547 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds