Wall clock time and date at job start Sun Mar 7 2021 02:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.47174 * 2 1 4 4 C 1.50706 * 109.46885 * 119.99926 * 2 1 3 5 5 C 1.38185 * 119.84391 * 254.97808 * 4 2 1 6 6 C 1.38313 * 120.14660 * 179.76662 * 5 4 2 7 7 F 1.35093 * 120.08704 * 180.27601 * 6 5 4 8 8 C 1.39803 * 119.82790 * 0.53658 * 6 5 4 9 9 C 1.47694 * 120.15575 * 179.74827 * 8 6 5 10 10 O 1.21575 * 119.99974 * 359.71582 * 9 8 6 11 11 N 1.34773 * 120.00477 * 179.71809 * 9 8 6 12 12 C 1.46501 * 120.00122 * 179.97438 * 11 9 8 13 13 H 1.08993 * 112.90929 * 336.25213 * 12 11 9 14 14 C 1.53962 * 113.66387 * 107.55425 * 12 11 9 15 15 C 1.53782 * 87.11063 * 139.88885 * 14 12 11 16 16 H 1.08997 * 113.61225 * 89.18406 * 15 14 12 17 17 C 1.52998 * 113.68747 * 220.07804 * 15 14 12 18 18 N 1.46499 * 109.46882 * 272.53320 * 17 15 14 19 19 C 1.34947 * 126.03226 * 124.72188 * 18 17 15 20 20 C 1.35320 * 107.74512 * 179.83722 * 19 18 17 21 21 C 1.39866 * 107.92044 * 0.42292 * 20 19 18 22 22 N 1.30835 * 108.20162 * 359.73691 * 21 20 19 23 23 C 1.53781 * 87.08260 * 334.63747 * 15 14 12 24 24 C 1.39654 * 119.69050 * 359.46528 * 8 6 5 25 25 C 1.38070 * 119.85311 * 0.25862 * 24 8 6 26 26 F 1.35098 * 119.91599 * 180.02562 * 25 24 8 27 27 H 0.96703 * 114.00015 * 300.00070 * 1 2 3 28 28 H 1.08995 * 109.47495 * 239.99973 * 2 1 3 29 29 H 1.48498 * 109.99779 * 178.67734 * 3 2 1 30 30 H 1.48492 * 109.99961 * 300.00251 * 3 2 1 31 31 H 1.07997 * 119.92695 * 0.02562 * 5 4 2 32 32 H 0.97002 * 120.00080 * 0.02562 * 11 9 8 33 33 H 1.08997 * 113.53543 * 25.33559 * 14 12 11 34 34 H 1.08994 * 113.66446 * 254.45762 * 14 12 11 35 35 H 1.08995 * 109.47742 * 32.53801 * 17 15 14 36 36 H 1.09003 * 109.47049 * 152.53819 * 17 15 14 37 37 H 1.08003 * 126.13312 * 359.97438 * 19 18 17 38 38 H 1.07999 * 126.04183 * 180.15607 * 20 19 18 39 39 H 1.07995 * 125.90536 * 179.71635 * 21 20 19 40 40 H 1.09002 * 113.61445 * 139.98212 * 23 15 14 41 41 H 1.09002 * 113.61408 * 270.79943 * 23 15 14 42 42 H 1.08001 * 120.07294 * 180.28034 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4534 0.0197 2.2812 6 6 2.9117 -0.6255 3.4155 7 9 3.4168 0.0898 4.4441 8 6 2.8560 -2.0203 3.4924 9 6 3.3486 -2.7171 4.6979 10 8 3.8085 -2.0780 5.6242 11 7 3.2882 -4.0615 4.7713 12 6 3.7773 -4.7526 5.9668 13 1 4.5117 -4.1701 6.5230 14 6 2.6556 -5.3332 6.8473 15 6 3.5563 -6.5635 7.0479 16 1 4.2302 -6.4769 7.9002 17 6 2.7971 -7.8916 7.0231 18 7 2.3124 -8.2022 8.3702 19 6 1.0326 -8.4570 8.7142 20 6 1.0038 -8.6993 10.0452 21 6 2.3091 -8.5791 10.5329 22 7 3.0944 -8.2812 9.5298 23 6 4.2128 -6.2040 5.7045 24 6 2.3270 -2.7514 2.4266 25 6 1.8679 -2.0936 1.3028 26 9 1.3554 -2.7995 0.2712 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 3.5346 1.7702 0.0322 30 1 1.5615 2.4679 -1.2084 31 1 2.4998 1.0969 2.2182 32 1 2.9215 -4.5716 4.0321 33 1 1.7387 -5.5481 6.2985 34 1 2.4799 -4.7670 7.7619 35 1 1.9504 -7.8136 6.3412 36 1 3.4639 -8.6849 6.6850 37 1 0.1838 -8.4681 8.0465 38 1 0.1270 -8.9385 10.6287 39 1 2.6159 -8.7094 11.5602 40 1 5.2942 -6.3407 5.6966 41 1 3.7224 -6.6582 4.8435 42 1 2.2768 -3.8288 2.4814 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:52 Heat of formation + Delta-G solvation = -11.498042 kcal Electronic energy + Delta-G solvation = -29701.589267 eV Core-core repulsion = 25094.460049 eV Total energy + Delta-G solvation = -4607.129218 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.123 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.15622 -50.03818 -42.09747 -41.53188 -40.44070 -39.37293 -37.73795 -35.36345 -33.94953 -32.97631 -31.46814 -30.97161 -28.82163 -27.78252 -26.95160 -24.84693 -24.51278 -23.35571 -22.07209 -21.96894 -21.58164 -20.74596 -19.63244 -18.86156 -18.72161 -18.26076 -17.96292 -17.41510 -17.26195 -16.94493 -16.57606 -16.42332 -16.26059 -16.17165 -15.97688 -15.72800 -15.59417 -15.42438 -15.11692 -14.68164 -14.59588 -14.26007 -14.23848 -13.83766 -13.78164 -13.70136 -13.46369 -13.26535 -13.12996 -12.97168 -12.46216 -12.41321 -12.20293 -12.01999 -11.64641 -11.50411 -11.13892 -10.74278 -10.69123 -10.31306 -10.23138 -9.88214 -9.47153 -5.22804 -0.89407 -0.42032 1.00196 1.00687 1.34474 1.47880 1.56053 1.79411 1.80674 2.00060 2.18934 2.69837 2.74458 2.98619 3.10548 3.19380 3.29026 3.34553 3.36043 3.42492 3.58356 3.63679 3.78464 3.93450 3.97515 4.00514 4.19399 4.20055 4.23386 4.32502 4.39415 4.40858 4.52773 4.55398 4.57554 4.62902 4.71621 4.78991 4.84841 4.90373 5.05584 5.15025 5.27486 5.34572 5.77354 6.09542 6.19765 6.31594 6.82017 6.94350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.072 4.072 3 Si 0.689 3.311 4 C -0.100 4.100 5 C -0.130 4.130 6 C 0.160 3.840 7 F -0.103 7.103 8 C -0.142 4.142 9 C 0.561 3.439 10 O -0.511 6.511 11 N -0.714 5.714 12 C 0.125 3.875 13 H 0.121 0.879 14 C -0.146 4.146 15 C -0.120 4.120 16 H 0.111 0.889 17 C 0.146 3.854 18 N -0.371 5.371 19 C 0.052 3.948 20 C -0.274 4.274 21 C 0.045 3.955 22 N -0.295 5.295 23 C -0.137 4.137 24 C -0.094 4.094 25 C 0.110 3.890 26 F -0.121 7.121 27 H 0.381 0.619 28 H 0.122 0.878 29 H -0.250 1.250 30 H -0.246 1.246 31 H 0.159 0.841 32 H 0.401 0.599 33 H 0.086 0.914 34 H 0.076 0.924 35 H 0.096 0.904 36 H 0.088 0.912 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.183 0.817 40 H 0.084 0.916 41 H 0.091 0.909 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.970 -1.288 -1.996 3.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.182 4.182 3 Si 0.589 3.411 4 C -0.102 4.102 5 C -0.149 4.149 6 C 0.140 3.860 7 F -0.081 7.081 8 C -0.146 4.146 9 C 0.347 3.653 10 O -0.387 6.387 11 N -0.365 5.365 12 C 0.021 3.979 13 H 0.139 0.861 14 C -0.185 4.185 15 C -0.139 4.139 16 H 0.129 0.871 17 C 0.024 3.976 18 N -0.154 5.154 19 C -0.094 4.094 20 C -0.304 4.304 21 C -0.141 4.141 22 N -0.117 5.117 23 C -0.176 4.176 24 C -0.113 4.113 25 C 0.090 3.910 26 F -0.099 7.099 27 H 0.229 0.771 28 H 0.140 0.860 29 H -0.175 1.175 30 H -0.170 1.170 31 H 0.176 0.824 32 H 0.236 0.764 33 H 0.105 0.895 34 H 0.095 0.905 35 H 0.114 0.886 36 H 0.106 0.894 37 H 0.189 0.811 38 H 0.165 0.835 39 H 0.200 0.800 40 H 0.103 0.897 41 H 0.109 0.891 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.807 -0.261 -2.816 2.941 hybrid contribution -1.084 -1.224 -0.289 1.661 sum -1.892 -1.485 -3.105 3.928 Atomic orbital electron populations 1.86595 1.16066 1.81618 1.49197 1.25150 0.85990 1.10768 0.96334 0.94823 0.81560 0.76689 0.88067 1.20522 0.99336 0.92712 0.97618 1.20877 1.01087 1.01019 0.91877 1.17496 0.95195 0.87984 0.85364 1.91662 1.83495 1.77053 1.55890 1.19885 1.05660 0.92576 0.96504 1.17867 0.78860 0.82515 0.86084 1.90901 1.44045 1.65730 1.37998 1.45846 1.64089 1.06109 1.20480 1.22567 0.97284 0.91871 0.86184 0.86078 1.23600 0.97707 0.96489 1.00686 1.22700 0.98770 0.93135 0.99340 0.87080 1.21723 0.99709 0.97445 0.78676 1.48699 1.05212 1.53930 1.07536 1.22581 0.88344 1.01196 0.97319 1.21561 0.98782 1.15747 0.94303 1.23934 0.92084 0.99249 0.98882 1.77341 1.19352 1.23717 0.91251 1.23382 1.02279 0.94730 0.97213 1.21166 0.97751 1.01058 0.91363 1.17219 0.98936 0.88879 0.85926 1.91585 1.84201 1.78021 1.56105 0.77098 0.86035 1.17451 1.16978 0.82390 0.76358 0.89519 0.90536 0.88552 0.89401 0.81102 0.83532 0.80026 0.89714 0.89089 0.83148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.56 12.88 -35.23 -0.45 0.11 16 2 C -0.07 0.12 2.44 36.01 0.09 0.20 16 3 Si 0.69 -1.73 29.90 -169.99 -5.08 -6.82 16 4 C -0.10 0.15 5.27 -104.49 -0.55 -0.40 16 5 C -0.13 0.24 8.62 -39.57 -0.34 -0.10 16 6 C 0.16 0.08 7.28 -38.97 -0.28 -0.21 16 7 F -0.10 -0.30 15.55 2.25 0.04 -0.27 16 8 C -0.14 0.02 5.88 -104.92 -0.62 -0.60 16 9 C 0.56 0.77 7.77 -12.40 -0.10 0.68 16 10 O -0.51 -2.84 14.94 5.30 0.08 -2.76 16 11 N -0.71 1.34 5.31 -53.91 -0.29 1.06 16 12 C 0.13 -0.20 4.25 -67.02 -0.28 -0.48 16 13 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 14 C -0.15 0.26 7.44 -25.82 -0.19 0.07 16 15 C -0.12 0.26 3.86 -89.81 -0.35 -0.09 16 16 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 17 C 0.15 -0.34 6.35 -4.04 -0.03 -0.37 16 18 N -0.37 -0.32 3.68 -61.37 -0.23 -0.55 16 19 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 20 C -0.27 -0.23 10.80 -40.01 -0.43 -0.66 16 21 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 22 N -0.30 -0.98 12.27 30.62 0.38 -0.60 16 23 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 24 C -0.09 0.20 9.51 -39.11 -0.37 -0.17 16 25 C 0.11 -0.09 7.23 -39.49 -0.29 -0.38 16 26 F -0.12 -0.08 16.73 2.25 0.04 -0.04 16 27 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 28 H 0.12 -0.12 7.89 -51.93 -0.41 -0.53 16 29 H -0.25 0.02 7.11 56.52 0.40 0.42 16 30 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 31 H 0.16 -0.67 5.10 -52.49 -0.27 -0.94 16 32 H 0.40 -1.94 6.76 -40.82 -0.28 -2.22 16 33 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 34 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.10 -0.46 7.78 -51.93 -0.40 -0.86 16 36 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.17 -0.57 8.06 -52.48 -0.42 -0.99 16 38 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.18 -0.12 8.06 -52.49 -0.42 -0.55 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 41 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 42 H 0.15 -0.76 6.41 -52.49 -0.34 -1.10 16 LS Contribution 365.67 15.07 5.51 5.51 Total: 0.00 -10.66 365.67 -9.01 -19.67 By element: Atomic # 1 Polarization: -8.13 SS G_CDS: -4.66 Total: -12.79 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -4.34 Total: -2.53 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.14 Total: -0.09 kcal Atomic # 8 Polarization: -2.27 SS G_CDS: -0.37 Total: -2.65 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.07 Total: -0.31 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.08 Total: -6.82 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -10.66 -9.01 -19.67 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.174 kcal (2) G-P(sol) polarization free energy of solvation -10.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds