Wall clock time and date at job start Sun Mar 7 2021 02:33:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35658 * 117.00064 * 2 1 4 4 C 1.40139 * 120.15160 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.18795 * 0.02562 * 4 3 2 6 6 O 1.21585 * 120.00363 * 359.71977 * 5 4 3 7 7 N 1.34781 * 119.99824 * 179.71797 * 5 4 3 8 8 C 1.46500 * 119.99985 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.85221 * 334.67013 * 8 7 5 10 10 C 1.53785 * 113.68813 * 105.94035 * 8 7 5 11 11 C 1.53779 * 87.08093 * 139.99098 * 10 8 7 12 12 H 1.09003 * 113.61186 * 89.11185 * 11 10 8 13 13 C 1.52998 * 113.68908 * 220.00507 * 11 10 8 14 14 N 1.46496 * 109.47161 * 272.53636 * 13 11 10 15 15 C 1.34945 * 126.03712 * 125.00245 * 14 13 11 16 16 C 1.35316 * 107.74556 * 179.97438 * 15 14 13 17 17 C 1.39870 * 107.92179 * 359.97438 * 16 15 14 18 18 N 1.30835 * 108.19743 * 359.74111 * 17 16 15 19 19 C 1.53781 * 113.61339 * 203.47543 * 8 7 5 20 20 C 1.39705 * 119.61771 * 179.72632 * 4 3 2 21 21 C 1.37789 * 119.90656 * 0.25554 * 20 4 3 22 22 C 1.50698 * 119.84928 * 180.02562 * 21 20 4 23 23 O 1.42905 * 109.47367 * 64.99895 * 22 21 20 24 24 Si 1.86298 * 109.47319 * 184.99741 * 22 21 20 25 25 C 1.38547 * 120.30210 * 359.97438 * 21 20 4 26 26 C 1.38054 * 120.39086 * 0.02562 * 25 21 20 27 27 H 1.09001 * 109.47042 * 59.99988 * 1 2 3 28 28 H 1.08999 * 109.47151 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47252 * 299.99745 * 1 2 3 30 30 H 0.96998 * 119.99866 * 0.02562 * 7 5 4 31 31 H 1.09003 * 113.60734 * 254.54218 * 10 8 7 32 32 H 1.08996 * 113.61146 * 25.43716 * 10 8 7 33 33 H 1.09002 * 109.47010 * 32.54063 * 13 11 10 34 34 H 1.09006 * 109.47124 * 152.53503 * 13 11 10 35 35 H 1.07997 * 126.12889 * 359.97438 * 15 14 13 36 36 H 1.08004 * 126.03644 * 179.97438 * 16 15 14 37 37 H 1.07999 * 125.89680 * 179.97438 * 17 16 15 38 38 H 1.09005 * 113.61302 * 334.48230 * 19 8 7 39 39 H 1.08996 * 113.61527 * 105.30394 * 19 8 7 40 40 H 1.07997 * 120.04251 * 180.23636 * 20 4 3 41 41 H 1.08999 * 109.46978 * 304.99836 * 22 21 20 42 42 H 0.96701 * 113.99763 * 59.99344 * 23 22 21 43 43 H 1.48504 * 109.99808 * 58.68106 * 24 22 21 44 44 H 1.48496 * 110.00145 * 180.02562 * 24 22 21 45 45 H 1.07998 * 119.80635 * 180.02562 * 25 21 20 46 46 H 1.08002 * 119.95962 * 180.02562 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2857 0.0005 5 6 4.2550 0.0532 0.0005 6 8 3.7095 -1.0334 0.0052 7 7 5.6005 0.1317 -0.0047 8 6 6.4057 -1.0922 -0.0041 9 1 5.8815 -1.9435 0.4301 10 6 7.0634 -1.3997 -1.3598 11 6 8.3093 -1.8314 -0.5686 12 1 8.3055 -2.8849 -0.2887 13 6 9.6273 -1.3916 -1.2093 14 7 10.0626 -2.4038 -2.1747 15 6 10.3507 -2.1885 -3.4753 16 6 10.7128 -3.3735 -4.0192 17 6 10.6441 -4.3462 -3.0165 18 7 10.2602 -3.7650 -1.9090 19 6 7.8260 -0.8948 0.5514 20 6 4.0668 2.5364 -0.0053 21 6 3.3038 3.6837 -0.0061 22 6 3.9768 5.0320 -0.0130 23 8 4.6945 5.2001 -1.2373 24 14 2.6891 6.3696 0.1405 25 6 1.9206 3.6034 -0.0018 26 6 1.2925 2.3740 0.0039 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 6.0357 0.9986 -0.0081 31 1 6.5856 -2.2160 -1.9016 32 1 7.2230 -0.5163 -1.9780 33 1 9.4828 -0.4400 -1.7209 34 1 10.3867 -1.2767 -0.4359 35 1 10.3012 -1.2403 -3.9900 36 1 11.0034 -3.5389 -5.0462 37 1 10.8726 -5.3951 -3.1351 38 1 8.1943 0.1267 0.4556 39 1 7.9637 -1.3022 1.5529 40 1 5.1447 2.6037 -0.0087 41 1 4.6695 5.0966 0.8261 42 1 4.1396 5.1540 -2.0279 43 1 1.9145 6.1875 1.3943 44 1 3.3400 7.7043 0.1343 45 1 1.3304 4.5078 -0.0030 46 1 0.2138 2.3195 0.0068 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:33:56 Heat of formation + Delta-G solvation = 40.350367 kcal Electronic energy + Delta-G solvation = -29353.015416 eV Core-core repulsion = 25212.822654 eV Total energy + Delta-G solvation = -4140.192762 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.04217 -41.76753 -40.70548 -39.25579 -39.10423 -37.20261 -35.08347 -33.67161 -32.43735 -31.88274 -30.90903 -28.76472 -28.38991 -26.83465 -26.25437 -25.59330 -23.93690 -22.56104 -21.99575 -21.55571 -21.40409 -20.51539 -19.46439 -18.44633 -18.23861 -18.11232 -17.34348 -16.92507 -16.86198 -16.37207 -16.22857 -16.15880 -15.92982 -15.84565 -15.53427 -15.20289 -14.76855 -14.61051 -14.51291 -14.41986 -14.17055 -13.76422 -13.68502 -13.61453 -13.50194 -13.35096 -13.19347 -12.86136 -12.46843 -12.29682 -12.21706 -12.11337 -11.92893 -11.85835 -11.52288 -11.44139 -10.84398 -10.46794 -10.27186 -10.24001 -9.97175 -9.41694 -9.31870 -5.14586 -0.29001 0.15151 1.06392 1.18211 1.53002 1.62432 1.83600 1.88300 2.04945 2.14402 2.19428 2.68950 3.31328 3.32326 3.40662 3.45122 3.48052 3.56745 3.61748 3.72964 3.88241 3.92973 3.99182 4.01979 4.10472 4.16511 4.17600 4.27927 4.29961 4.40083 4.42455 4.52418 4.54190 4.59334 4.63377 4.68471 4.80328 4.85877 4.90957 4.95745 4.97463 5.02461 5.18708 5.19557 5.23564 5.45294 5.55640 5.82474 6.15377 6.25548 6.45455 6.54090 6.87426 7.32935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.514 6.514 7 N -0.721 5.721 8 C 0.128 3.872 9 H 0.118 0.882 10 C -0.146 4.146 11 C -0.120 4.120 12 H 0.110 0.890 13 C 0.146 3.854 14 N -0.370 5.370 15 C 0.052 3.948 16 C -0.275 4.275 17 C 0.044 3.956 18 N -0.295 5.295 19 C -0.138 4.138 20 C -0.020 4.020 21 C -0.169 4.169 22 C -0.062 4.062 23 O -0.541 6.541 24 Si 0.683 3.317 25 C -0.046 4.046 26 C -0.214 4.214 27 H 0.059 0.941 28 H 0.105 0.895 29 H 0.058 0.942 30 H 0.398 0.602 31 H 0.074 0.926 32 H 0.086 0.914 33 H 0.096 0.904 34 H 0.087 0.913 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.090 0.910 39 H 0.082 0.918 40 H 0.134 0.866 41 H 0.114 0.886 42 H 0.380 0.620 43 H -0.257 1.257 44 H -0.253 1.253 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.992 5.296 -2.172 6.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.349 3.651 6 O -0.390 6.390 7 N -0.373 5.373 8 C 0.023 3.977 9 H 0.135 0.865 10 C -0.185 4.185 11 C -0.139 4.139 12 H 0.128 0.872 13 C 0.024 3.976 14 N -0.153 5.153 15 C -0.094 4.094 16 C -0.305 4.305 17 C -0.142 4.142 18 N -0.117 5.117 19 C -0.176 4.176 20 C -0.038 4.038 21 C -0.170 4.170 22 C -0.173 4.173 23 O -0.346 6.346 24 Si 0.585 3.415 25 C -0.064 4.064 26 C -0.232 4.232 27 H 0.078 0.922 28 H 0.124 0.876 29 H 0.077 0.923 30 H 0.234 0.766 31 H 0.093 0.907 32 H 0.104 0.896 33 H 0.115 0.885 34 H 0.105 0.895 35 H 0.189 0.811 36 H 0.164 0.836 37 H 0.199 0.801 38 H 0.108 0.892 39 H 0.101 0.899 40 H 0.152 0.848 41 H 0.132 0.868 42 H 0.227 0.773 43 H -0.182 1.182 44 H -0.178 1.178 45 H 0.151 0.849 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.449 4.974 0.067 5.545 hybrid contribution 0.552 0.352 -0.675 0.941 sum -1.897 5.327 -0.608 5.687 Atomic orbital electron populations 1.23242 0.78145 1.04801 1.01459 1.86388 1.21235 1.25172 1.86135 1.19104 0.90959 0.85083 0.90440 1.19350 0.90927 0.93910 1.13721 1.17991 0.81972 0.88659 0.76431 1.90849 1.71495 1.28617 1.48017 1.45877 1.05862 1.09336 1.76260 1.22423 0.89802 0.88627 0.96799 0.86460 1.23561 0.95805 1.01917 0.97187 1.22699 0.92778 1.01539 0.96923 0.87213 1.21736 0.96368 0.88179 0.91289 1.48705 1.51734 1.06980 1.07857 1.22581 1.00756 1.00654 0.85426 1.21553 1.15117 0.92186 1.01616 1.23927 0.99262 1.00533 0.90505 1.77337 1.22648 0.88024 1.23667 1.23374 0.94795 1.00297 0.99166 1.20952 0.99812 0.89866 0.93202 1.20117 0.93558 0.96030 1.07294 1.24955 1.03173 0.99010 0.90127 1.86502 1.37975 1.95137 1.15004 0.94829 0.81227 0.77701 0.87717 1.20973 0.93608 0.97252 0.94524 1.21244 1.00786 0.91557 1.09655 0.92232 0.87644 0.92321 0.76601 0.90746 0.89595 0.88530 0.89472 0.81099 0.83560 0.80060 0.89174 0.89893 0.84794 0.86849 0.77280 1.18167 1.17803 0.84865 0.84085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.96 8.57 -40.55 -0.35 -1.31 16 3 C 0.19 0.41 6.70 -38.69 -0.26 0.15 16 4 C -0.18 -0.34 5.89 -104.85 -0.62 -0.96 16 5 C 0.56 1.97 7.76 -12.47 -0.10 1.88 16 6 O -0.51 -3.88 14.78 -16.59 -0.25 -4.12 16 7 N -0.72 -0.09 5.31 -54.05 -0.29 -0.38 16 8 C 0.13 0.01 4.22 -67.12 -0.28 -0.27 16 9 H 0.12 0.27 7.50 -51.93 -0.39 -0.12 16 10 C -0.15 0.04 7.44 -25.92 -0.19 -0.15 16 11 C -0.12 0.11 3.86 -89.81 -0.35 -0.23 16 12 H 0.11 0.13 7.97 -51.93 -0.41 -0.28 16 13 C 0.15 -0.19 6.35 -4.05 -0.03 -0.22 16 14 N -0.37 -0.62 3.68 -61.37 -0.23 -0.84 16 15 C 0.05 0.04 11.45 -17.22 -0.20 -0.16 16 16 C -0.28 -0.39 10.80 -40.01 -0.43 -0.83 16 17 C 0.04 0.11 12.03 -17.37 -0.21 -0.10 16 18 N -0.30 -1.18 12.28 30.62 0.38 -0.81 16 19 C -0.14 0.31 7.39 -25.92 -0.19 0.12 16 20 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 21 C -0.17 0.21 5.35 -104.67 -0.56 -0.35 16 22 C -0.06 0.11 2.79 36.00 0.10 0.22 16 23 O -0.54 0.84 12.83 -35.23 -0.45 0.38 16 24 Si 0.68 -1.58 29.78 -169.99 -5.06 -6.64 16 25 C -0.05 0.08 8.65 -39.53 -0.34 -0.27 16 26 C -0.21 0.13 9.03 -39.47 -0.36 -0.23 16 27 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 28 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 30 H 0.40 -1.01 6.74 -40.82 -0.28 -1.29 16 31 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 32 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 33 H 0.10 -0.36 7.78 -51.93 -0.40 -0.76 16 34 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.17 -0.45 8.06 -52.49 -0.42 -0.87 16 36 H 0.15 -0.06 8.06 -52.48 -0.42 -0.48 16 37 H 0.18 -0.03 8.06 -52.49 -0.42 -0.45 16 38 H 0.09 -0.36 8.07 -51.93 -0.42 -0.78 16 39 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 40 H 0.13 -0.33 6.40 -52.49 -0.34 -0.67 16 41 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 42 H 0.38 -1.94 8.70 45.56 0.40 -1.55 16 43 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 44 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 45 H 0.13 -0.53 4.88 -52.49 -0.26 -0.79 16 46 H 0.14 -0.40 6.30 -52.49 -0.33 -0.73 16 LS Contribution 382.39 15.07 5.76 5.76 Total: 0.00 -11.23 382.39 -10.06 -21.30 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -6.20 Total: -12.57 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -3.38 Total: -0.78 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -0.14 Total: -2.03 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -1.04 Total: -5.05 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.06 Total: -6.64 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -11.23 -10.06 -21.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.647 kcal (2) G-P(sol) polarization free energy of solvation -11.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.296 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds