Wall clock time and date at job start Sun Mar 7 2021 02:34:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38638 * 119.93654 * 194.99772 * 4 2 1 6 6 F 1.35101 * 119.88342 * 359.97438 * 5 4 2 7 7 C 1.38673 * 120.23708 * 179.97438 * 5 4 2 8 8 C 1.37817 * 120.12322 * 359.97438 * 7 5 4 9 9 C 1.39676 * 119.87604 * 359.97438 * 8 7 5 10 10 C 1.47726 * 120.11875 * 179.97438 * 9 8 7 11 11 O 1.21569 * 119.99895 * 179.97438 * 10 9 8 12 12 N 1.34776 * 119.99723 * 359.97438 * 10 9 8 13 13 C 1.46502 * 119.99849 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84453 * 25.33882 * 13 12 10 15 15 C 1.53775 * 113.61435 * 156.52982 * 13 12 10 16 16 C 1.53779 * 87.08037 * 139.98615 * 15 13 12 17 17 H 1.08994 * 113.61838 * 89.20195 * 16 15 13 18 18 C 1.53005 * 113.61443 * 220.02042 * 16 15 13 19 19 N 1.46496 * 109.47119 * 184.99636 * 18 16 15 20 20 C 1.34950 * 126.03405 * 124.71481 * 19 18 16 21 21 C 1.35326 * 107.74676 * 179.84153 * 20 19 18 22 22 C 1.39872 * 107.91484 * 0.42341 * 21 20 19 23 23 N 1.30834 * 108.20380 * 359.73932 * 22 21 20 24 24 C 1.53780 * 113.61784 * 254.14126 * 13 12 10 25 25 C 1.37852 * 119.94188 * 14.71814 * 4 2 1 26 26 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 27 27 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 28 28 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 29 29 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 30 30 H 1.08006 * 119.94187 * 179.97438 * 7 5 4 31 31 H 1.08000 * 120.06502 * 179.97438 * 8 7 5 32 32 H 0.97003 * 119.99883 * 0.02562 * 12 10 9 33 33 H 1.08998 * 113.61907 * 254.53671 * 15 13 12 34 34 H 1.09002 * 113.61100 * 25.35387 * 15 13 12 35 35 H 1.08999 * 109.47338 * 305.00077 * 18 16 15 36 36 H 1.09004 * 109.46915 * 65.00337 * 18 16 15 37 37 H 1.08006 * 126.12806 * 0.02562 * 20 19 18 38 38 H 1.07994 * 126.04217 * 180.16142 * 21 20 19 39 39 H 1.07995 * 125.89520 * 179.75412 * 22 21 20 40 40 H 1.08996 * 113.61378 * 334.56958 * 24 13 12 41 41 H 1.09007 * 113.61282 * 105.46857 * 24 13 12 42 42 H 1.07991 * 120.06378 * 0.02799 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 3.2561 -0.5741 1.6157 6 9 4.0934 0.1955 0.8864 7 6 3.7248 -1.2247 2.7471 8 6 2.8749 -2.0106 3.4950 9 6 1.5390 -2.1507 3.1119 10 6 0.6235 -2.9922 3.9093 11 8 -0.5389 -3.1122 3.5741 12 7 1.0769 -3.6268 5.0084 13 6 0.1689 -4.4609 5.7996 14 1 -0.6668 -4.8477 5.2163 15 6 0.8877 -5.5348 6.6331 16 6 -0.1112 -5.2177 7.7585 17 1 -1.0236 -5.8122 7.7129 18 6 0.5199 -5.2042 9.1523 19 7 -0.5260 -5.0128 10.1601 20 6 -0.7714 -5.8208 11.2128 21 6 -1.8115 -5.2963 11.9016 22 6 -2.2217 -4.1332 11.2418 23 7 -1.4519 -3.9624 10.1979 24 6 -0.2543 -3.8190 7.1314 25 6 1.0714 -1.4904 1.9738 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5137 -0.8901 28 1 1.5616 2.4678 1.2086 29 1 3.5346 1.7703 -0.0322 30 1 4.7578 -1.1154 3.0427 31 1 3.2410 -2.5172 4.3757 32 1 2.0043 -3.5307 5.2760 33 1 0.7853 -6.5420 6.2294 34 1 1.9188 -5.2798 6.8779 35 1 1.0273 -6.1522 9.3307 36 1 1.2403 -4.3886 9.2170 37 1 -0.2321 -6.7226 11.4627 38 1 -2.2502 -5.7060 12.7993 39 1 -3.0336 -3.4876 11.5425 40 1 0.4634 -3.0934 7.5139 41 1 -1.2775 -3.4431 7.1293 42 1 0.0387 -1.5927 1.6750 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:01 Heat of formation + Delta-G solvation = 37.824350 kcal Electronic energy + Delta-G solvation = -27131.863712 eV Core-core repulsion = 22996.327249 eV Total energy + Delta-G solvation = -4135.536463 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -50.46931 -42.06740 -41.49667 -40.31845 -39.08218 -37.67615 -35.25887 -33.77124 -32.80215 -31.92688 -30.92258 -28.61805 -27.09343 -26.84995 -25.53604 -23.66339 -23.25272 -21.92452 -21.63748 -21.44561 -20.73156 -19.23439 -18.84199 -18.39018 -18.20478 -17.62128 -17.30780 -16.81723 -16.61446 -16.20813 -16.03095 -15.80865 -15.64493 -15.34991 -15.15800 -14.95431 -14.92066 -14.70790 -14.33899 -14.04087 -13.68037 -13.66361 -13.56614 -13.48470 -13.26961 -12.99435 -12.75714 -12.30947 -12.23702 -11.95983 -11.59644 -11.59276 -11.41308 -11.01402 -10.92954 -10.29828 -10.18430 -10.03331 -9.69706 -9.47247 -4.96550 -0.55036 -0.02760 1.02077 1.21660 1.57988 1.63919 1.68563 1.99608 2.01297 2.02497 2.57049 2.81747 3.03139 3.18634 3.29686 3.36503 3.47108 3.58148 3.66645 3.70509 3.89207 3.91460 3.94313 4.05566 4.09088 4.16706 4.26218 4.26808 4.46055 4.52188 4.58303 4.66107 4.71381 4.73434 4.78345 4.84570 4.91666 5.01592 5.06279 5.06977 5.13900 5.16219 5.43676 5.55445 5.78745 6.10877 6.37580 6.51549 6.84180 7.13008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.069 4.069 3 Si 0.676 3.324 4 C -0.118 4.118 5 C 0.108 3.892 6 F -0.117 7.117 7 C -0.151 4.151 8 C -0.061 4.061 9 C -0.145 4.145 10 C 0.563 3.437 11 O -0.526 6.526 12 N -0.716 5.716 13 C 0.122 3.878 14 H 0.118 0.882 15 C -0.137 4.137 16 C -0.118 4.118 17 H 0.100 0.900 18 C 0.145 3.855 19 N -0.373 5.373 20 C 0.050 3.950 21 C -0.274 4.274 22 C 0.042 3.958 23 N -0.289 5.289 24 C -0.134 4.134 25 C -0.005 4.005 26 H 0.389 0.611 27 H 0.085 0.915 28 H -0.258 1.258 29 H -0.229 1.229 30 H 0.148 0.852 31 H 0.138 0.862 32 H 0.400 0.600 33 H 0.082 0.918 34 H 0.091 0.909 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.182 0.818 40 H 0.086 0.914 41 H 0.078 0.922 42 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.101 -2.192 0.000 4.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.179 4.179 3 Si 0.575 3.425 4 C -0.119 4.119 5 C 0.088 3.912 6 F -0.096 7.096 7 C -0.170 4.170 8 C -0.080 4.080 9 C -0.148 4.148 10 C 0.350 3.650 11 O -0.402 6.402 12 N -0.368 5.368 13 C 0.018 3.982 14 H 0.136 0.864 15 C -0.176 4.176 16 C -0.138 4.138 17 H 0.119 0.881 18 C 0.024 3.976 19 N -0.156 5.156 20 C -0.096 4.096 21 C -0.304 4.304 22 C -0.144 4.144 23 N -0.111 5.111 24 C -0.173 4.173 25 C -0.024 4.024 26 H 0.238 0.762 27 H 0.102 0.898 28 H -0.182 1.182 29 H -0.154 1.154 30 H 0.165 0.835 31 H 0.156 0.844 32 H 0.235 0.765 33 H 0.101 0.899 34 H 0.109 0.891 35 H 0.117 0.883 36 H 0.104 0.896 37 H 0.190 0.810 38 H 0.165 0.835 39 H 0.199 0.801 40 H 0.105 0.895 41 H 0.097 0.903 42 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 4.241 -1.266 -0.401 4.444 hybrid contribution 0.541 -1.023 1.104 1.599 sum 4.783 -2.289 0.703 5.349 Atomic orbital electron populations 1.86401 1.16615 1.81950 1.50110 1.24545 0.86324 1.10463 0.96529 0.95911 0.80961 0.76131 0.89480 1.19426 0.92035 1.01070 0.99349 1.17763 0.87485 0.93964 0.91978 1.91498 1.70817 1.71400 1.75866 1.21041 1.01807 0.99415 0.94747 1.21165 0.91935 0.96204 0.98650 1.20064 0.94219 1.02226 0.98299 1.18127 0.87333 0.79310 0.80243 1.90825 1.17567 1.62300 1.69557 1.45869 1.14029 1.49603 1.27272 1.22560 0.93796 0.91219 0.90650 0.86405 1.23375 0.98992 0.99883 0.95366 1.22657 0.99803 0.99258 0.92071 0.88130 1.21731 0.87216 1.03102 0.85573 1.48730 1.26537 1.19090 1.21200 1.22609 0.99357 0.97603 0.90035 1.21564 1.02808 1.00355 1.05636 1.23957 0.99436 0.97797 0.93231 1.77401 1.03338 1.08721 1.21602 1.23478 1.03394 0.95947 0.94444 1.21004 1.00936 0.90022 0.90420 0.76244 0.89760 1.18222 1.15364 0.83452 0.84382 0.76454 0.89913 0.89093 0.88343 0.89623 0.81042 0.83546 0.80086 0.89549 0.90280 0.82328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.18 11.47 -35.23 -0.40 -0.58 16 2 C -0.07 -0.03 2.96 36.00 0.11 0.08 16 3 Si 0.68 -0.09 30.73 -169.99 -5.22 -5.31 16 4 C -0.12 -0.28 5.15 -104.62 -0.54 -0.82 16 5 C 0.11 0.21 6.67 -39.27 -0.26 -0.06 16 6 F -0.12 -0.31 12.86 2.25 0.03 -0.28 16 7 C -0.15 0.02 10.01 -39.58 -0.40 -0.37 16 8 C -0.06 0.05 9.54 -39.20 -0.37 -0.32 16 9 C -0.14 -0.27 5.87 -104.96 -0.62 -0.88 16 10 C 0.56 1.62 7.77 -12.38 -0.10 1.52 16 11 O -0.53 -3.62 15.96 5.30 0.08 -3.54 16 12 N -0.72 0.40 5.31 -54.00 -0.29 0.12 16 13 C 0.12 -0.06 4.21 -67.12 -0.28 -0.34 16 14 H 0.12 0.18 7.50 -51.93 -0.39 -0.21 16 15 C -0.14 0.45 7.39 -25.92 -0.19 0.26 16 16 C -0.12 0.20 3.83 -89.72 -0.34 -0.14 16 17 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 18 C 0.15 -0.29 6.35 -4.04 -0.03 -0.32 16 19 N -0.37 -0.42 3.68 -61.36 -0.23 -0.65 16 20 C 0.05 0.01 11.45 -17.22 -0.20 -0.19 16 21 C -0.27 -0.29 10.80 -40.01 -0.43 -0.72 16 22 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 23 N -0.29 -1.02 12.42 30.62 0.38 -0.64 16 24 C -0.13 0.01 7.45 -25.83 -0.19 -0.18 16 25 C -0.01 -0.02 8.91 -39.20 -0.35 -0.37 16 26 H 0.39 -1.83 8.74 45.56 0.40 -1.44 16 27 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 28 H -0.26 -0.97 7.11 56.52 0.40 -0.57 16 29 H -0.23 -0.48 5.40 56.52 0.30 -0.18 16 30 H 0.15 -0.36 8.06 -52.48 -0.42 -0.78 16 31 H 0.14 -0.61 6.40 -52.49 -0.34 -0.95 16 32 H 0.40 -1.43 6.74 -40.82 -0.28 -1.71 16 33 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.09 -0.45 8.07 -51.93 -0.42 -0.87 16 35 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 36 H 0.09 -0.21 7.85 -51.93 -0.41 -0.61 16 37 H 0.17 -0.54 8.06 -52.48 -0.42 -0.97 16 38 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.18 -0.05 8.06 -52.49 -0.42 -0.48 16 40 H 0.09 -0.02 7.90 -51.93 -0.41 -0.43 16 41 H 0.08 0.19 8.14 -51.93 -0.42 -0.24 16 42 H 0.16 0.70 6.71 -52.49 -0.35 0.34 16 LS Contribution 357.92 15.07 5.39 5.39 Total: 0.00 -10.70 357.92 -9.93 -20.63 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -5.28 Total: -12.17 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -4.40 Total: -2.97 kcal Atomic # 7 Polarization: -1.04 SS G_CDS: -0.13 Total: -1.18 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.32 Total: -4.12 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.03 Total: -0.28 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.22 Total: -5.31 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -10.70 -9.93 -20.63 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.452 kcal (2) G-P(sol) polarization free energy of solvation -10.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.824 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds