Wall clock time and date at job start Sun Mar 7 2021 02:34:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.39278 * 121.03276 * 2 1 4 4 C 1.46501 * 134.20085 * 359.95359 * 3 2 1 5 5 C 1.50704 * 126.59477 * 0.03049 * 4 3 2 6 6 O 1.42902 * 109.46787 * 284.99277 * 5 4 3 7 7 Si 1.86303 * 109.46922 * 164.99856 * 5 4 3 8 8 C 1.34175 * 106.80374 * 180.02562 * 4 3 2 9 9 N 1.36946 * 109.95297 * 0.02562 * 8 4 3 10 10 C 1.37153 * 110.11467 * 359.97438 * 9 8 4 11 11 N 1.32817 * 132.96847 * 179.97438 * 10 9 8 12 12 C 1.31312 * 121.89092 * 179.75223 * 11 10 9 13 13 C 1.39756 * 121.03022 * 179.97438 * 2 1 3 14 14 C 1.47668 * 120.45368 * 359.97438 * 13 2 1 15 15 O 1.21571 * 120.00071 * 354.20221 * 14 13 2 16 16 N 1.34775 * 119.99954 * 174.20031 * 14 13 2 17 17 C 1.46497 * 120.00202 * 180.02562 * 16 14 13 18 18 H 1.09010 * 112.90500 * 23.75242 * 17 16 14 19 19 C 1.53773 * 113.61562 * 154.99889 * 17 16 14 20 20 C 1.53777 * 87.17587 * 139.94269 * 19 17 16 21 21 H 1.08993 * 113.61700 * 89.15676 * 20 19 17 22 22 C 1.53001 * 113.61840 * 220.06653 * 20 19 17 23 23 N 1.46497 * 109.47234 * 185.00032 * 22 20 19 24 24 C 1.34942 * 126.04068 * 124.99936 * 23 22 20 25 25 C 1.35325 * 107.74587 * 179.97438 * 24 23 22 26 26 C 1.39863 * 107.91788 * 359.97438 * 25 24 23 27 27 N 1.30834 * 108.20493 * 359.74170 * 26 25 24 28 28 C 1.53772 * 113.61691 * 252.50349 * 17 16 14 29 29 H 1.09007 * 109.46824 * 263.78638 * 1 2 3 30 30 H 1.08999 * 109.47351 * 23.78668 * 1 2 3 31 31 H 1.09005 * 109.47404 * 143.79115 * 1 2 3 32 32 H 1.08995 * 109.47602 * 44.99656 * 5 4 3 33 33 H 0.96700 * 114.00160 * 180.02562 * 6 5 4 34 34 H 1.48500 * 109.99937 * 298.67837 * 7 5 4 35 35 H 1.48505 * 110.00059 * 59.99496 * 7 5 4 36 36 H 1.08004 * 125.02574 * 179.97438 * 8 4 3 37 37 H 0.96994 * 124.94448 * 180.02562 * 9 8 4 38 38 H 1.08002 * 119.31301 * 180.29276 * 12 11 10 39 39 H 0.97002 * 119.99411 * 0.02562 * 16 14 13 40 40 H 1.09003 * 113.61706 * 254.53556 * 19 17 16 41 41 H 1.09002 * 113.61399 * 25.34957 * 19 17 16 42 42 H 1.09001 * 109.46503 * 304.99622 * 22 20 19 43 43 H 1.09000 * 109.47012 * 64.99335 * 22 20 19 44 44 H 1.07995 * 126.12639 * 359.97438 * 24 23 22 45 45 H 1.08004 * 126.03592 * 179.97438 * 25 24 23 46 46 H 1.08007 * 125.89278 * 180.02562 * 26 25 24 47 47 H 1.09008 * 113.61247 * 334.56159 * 28 17 16 48 48 H 1.09000 * 113.62283 * 105.38439 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1934 0.0000 4 6 1.8516 2.6101 -0.0009 5 6 0.4526 3.1704 -0.0014 6 8 -0.1188 3.0232 -1.3029 7 14 0.5070 4.9765 0.4523 8 6 2.9948 3.3125 -0.0009 9 7 4.0669 2.4604 -0.0008 10 6 3.6348 1.1587 0.0000 11 7 4.2720 -0.0066 0.0000 12 6 3.6266 -1.1501 0.0057 13 6 2.2274 -1.1976 0.0005 14 6 1.5225 -2.4951 0.0017 15 8 0.3119 -2.5291 0.1085 16 7 2.2210 -3.6417 -0.1158 17 6 1.5217 -4.9289 -0.1152 18 1 0.4798 -4.8458 -0.4247 19 6 2.2910 -6.0483 -0.8361 20 6 1.8281 -6.9876 0.2900 21 1 0.8703 -7.4684 0.0916 22 6 2.9054 -7.9728 0.7481 23 7 2.3358 -8.8967 1.7319 24 6 2.3495 -10.2440 1.6568 25 6 1.7248 -10.7248 2.7568 26 6 1.3159 -9.6339 3.5307 27 7 1.6867 -8.5378 2.9203 28 6 1.7172 -5.7357 1.1792 29 1 -0.3633 -0.1112 1.0217 30 1 -0.3634 0.9403 -0.4145 31 1 -0.3634 -0.8292 -0.6071 32 1 -0.1550 2.6314 0.7253 33 1 -1.0209 3.3636 -1.3772 34 1 1.0700 5.1408 1.8165 35 1 1.3326 5.7226 -0.5311 36 1 3.0599 4.3906 -0.0019 37 1 4.9965 2.7372 -0.0004 38 1 4.1869 -2.0735 0.0102 39 1 3.1870 -3.6145 -0.2007 40 1 1.8794 -6.3018 -1.8131 41 1 3.3695 -5.8922 -0.8589 42 1 3.2711 -8.5362 -0.1104 43 1 3.7311 -7.4237 1.2007 44 1 2.7817 -10.8330 0.8614 45 1 1.5696 -11.7667 2.9948 46 1 0.7893 -9.6875 4.4722 47 1 2.6391 -5.4948 1.7088 48 1 0.8429 -5.7357 1.8301 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:21 Heat of formation + Delta-G solvation = 122.715170 kcal Electronic energy + Delta-G solvation = -32155.728506 eV Core-core repulsion = 27794.947820 eV Total energy + Delta-G solvation = -4360.780686 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.84329 -42.02155 -41.16214 -39.75497 -38.52299 -37.73776 -35.39838 -34.77450 -33.59562 -32.04946 -31.10625 -30.80430 -28.89121 -28.36060 -26.77669 -26.49034 -25.03557 -24.22462 -23.43108 -21.90447 -21.84165 -21.41408 -20.81627 -20.30021 -19.23808 -18.63852 -18.38238 -18.23979 -17.61886 -17.24276 -16.67207 -16.54129 -16.37610 -15.78620 -15.64601 -15.47441 -15.29798 -15.15183 -14.95383 -14.89835 -14.67923 -14.15300 -14.09905 -13.84613 -13.73959 -13.60760 -13.56846 -13.52211 -13.40561 -13.24766 -12.97346 -12.77451 -12.60776 -12.21141 -11.98558 -11.88771 -11.55069 -11.35995 -11.05873 -10.94384 -10.36810 -10.26213 -10.17617 -10.01242 -9.57987 -9.44287 -9.14812 -5.07562 -0.22445 -0.05356 1.05164 1.21982 1.32777 1.58442 1.61442 1.61518 1.88790 1.93674 2.03940 2.13929 2.85307 3.23240 3.25829 3.35631 3.39749 3.52627 3.57856 3.69687 3.73026 3.78284 3.84402 3.96030 3.97800 4.04775 4.11582 4.11822 4.21710 4.28329 4.31029 4.48491 4.58577 4.64677 4.66762 4.70647 4.76453 4.77520 4.89802 4.94689 4.95519 5.05691 5.11701 5.16719 5.18647 5.21524 5.39351 5.50690 5.60352 5.77206 5.81512 6.08522 6.14013 6.49824 6.64730 6.85119 6.87088 7.26929 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.087 3.913 3 C -0.148 4.148 4 C -0.132 4.132 5 C -0.041 4.041 6 O -0.544 6.544 7 Si 0.687 3.313 8 C 0.064 3.936 9 N -0.569 5.569 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.574 3.426 15 O -0.528 6.528 16 N -0.718 5.718 17 C 0.125 3.875 18 H 0.118 0.882 19 C -0.138 4.138 20 C -0.119 4.119 21 H 0.100 0.900 22 C 0.145 3.855 23 N -0.372 5.372 24 C 0.050 3.950 25 C -0.275 4.275 26 C 0.042 3.958 27 N -0.289 5.289 28 C -0.134 4.134 29 H 0.082 0.918 30 H 0.080 0.920 31 H 0.099 0.901 32 H 0.076 0.924 33 H 0.381 0.619 34 H -0.254 1.254 35 H -0.251 1.251 36 H 0.177 0.823 37 H 0.426 0.574 38 H 0.163 0.837 39 H 0.399 0.601 40 H 0.081 0.919 41 H 0.091 0.909 42 H 0.098 0.902 43 H 0.086 0.914 44 H 0.172 0.828 45 H 0.146 0.854 46 H 0.182 0.818 47 H 0.086 0.914 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.676 0.708 -1.558 1.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.078 3.922 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.152 4.152 6 O -0.350 6.350 7 Si 0.588 3.412 8 C -0.062 4.062 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.012 3.988 13 C -0.241 4.241 14 C 0.362 3.638 15 O -0.406 6.406 16 N -0.369 5.369 17 C 0.020 3.980 18 H 0.136 0.864 19 C -0.177 4.177 20 C -0.138 4.138 21 H 0.118 0.882 22 C 0.023 3.977 23 N -0.155 5.155 24 C -0.096 4.096 25 C -0.304 4.304 26 C -0.145 4.145 27 N -0.110 5.110 28 C -0.173 4.173 29 H 0.100 0.900 30 H 0.099 0.901 31 H 0.118 0.882 32 H 0.094 0.906 33 H 0.229 0.771 34 H -0.179 1.179 35 H -0.176 1.176 36 H 0.194 0.806 37 H 0.264 0.736 38 H 0.179 0.821 39 H 0.234 0.766 40 H 0.100 0.900 41 H 0.109 0.891 42 H 0.116 0.884 43 H 0.104 0.896 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.199 0.801 47 H 0.104 0.896 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.007 2.651 -1.457 3.630 hybrid contribution 0.599 -1.417 -0.016 1.539 sum 2.606 1.234 -1.474 3.238 Atomic orbital electron populations 1.21251 0.88793 1.04832 1.03837 1.19909 0.97238 0.89058 0.85967 1.19450 0.92809 0.93373 1.09829 1.19538 0.93171 0.90666 1.10578 1.24041 0.91418 1.10914 0.88813 1.86541 1.33830 1.85673 1.28966 0.94940 0.90393 0.76081 0.79832 1.21620 0.85365 0.95606 1.03652 1.41456 1.09481 1.02731 1.63803 1.18467 0.89311 0.85834 0.98844 1.66436 1.40518 0.95949 1.18724 1.22505 0.90123 0.94394 0.91767 1.20447 0.94750 0.93818 1.15131 1.17878 0.86855 0.83274 0.75809 1.90751 1.13542 1.87026 1.49266 1.45859 1.10422 1.05493 1.75176 1.22506 0.98215 0.80401 0.96903 0.86374 1.23386 1.01160 0.94793 0.98380 1.22653 0.99376 0.94452 0.97345 0.88192 1.21738 0.95481 0.91073 0.89359 1.48733 1.44779 1.04620 1.17339 1.22604 1.01568 0.84719 1.00724 1.21558 1.10670 1.00489 0.97699 1.23948 1.00005 0.90107 1.00406 1.77400 1.15051 1.23529 0.95057 1.23481 1.03505 0.93562 0.96720 0.89989 0.90113 0.88234 0.90640 0.77121 1.17889 1.17589 0.80585 0.73554 0.82052 0.76571 0.90010 0.89091 0.88369 0.89600 0.81060 0.83581 0.80117 0.89573 0.90376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.40 8.46 36.01 0.30 -0.09 16 2 C 0.09 0.34 5.98 -103.67 -0.62 -0.28 16 3 C -0.15 -0.60 6.16 -105.13 -0.65 -1.25 16 4 C -0.13 -0.33 5.61 -102.72 -0.58 -0.91 16 5 C -0.04 0.00 1.87 36.01 0.07 0.07 16 6 O -0.54 -0.02 11.64 -35.23 -0.41 -0.43 16 7 Si 0.69 -1.34 30.80 -169.99 -5.24 -6.58 16 8 C 0.06 0.07 10.44 -16.70 -0.17 -0.10 16 9 N -0.57 -0.70 6.04 -12.12 -0.07 -0.78 16 10 C 0.31 1.17 8.42 -155.72 -1.31 -0.14 16 11 N -0.50 -1.79 10.37 -11.96 -0.12 -1.92 16 12 C 0.18 0.30 10.67 -17.11 -0.18 0.12 16 13 C -0.23 -0.68 5.89 -104.82 -0.62 -1.30 16 14 C 0.57 1.64 7.72 -12.41 -0.10 1.54 16 15 O -0.53 -3.02 13.09 5.30 0.07 -2.95 16 16 N -0.72 0.27 5.31 -54.02 -0.29 -0.02 16 17 C 0.12 -0.06 4.24 -67.13 -0.28 -0.35 16 18 H 0.12 0.15 7.47 -51.92 -0.39 -0.23 16 19 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 20 C -0.12 0.19 3.84 -89.71 -0.34 -0.15 16 21 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 22 C 0.14 -0.27 6.35 -4.04 -0.03 -0.30 16 23 N -0.37 -0.45 3.68 -61.37 -0.23 -0.68 16 24 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 25 C -0.27 -0.31 10.80 -40.01 -0.43 -0.74 16 26 C 0.04 0.09 12.02 -17.37 -0.21 -0.12 16 27 N -0.29 -1.03 12.42 30.62 0.38 -0.65 16 28 C -0.13 0.02 7.44 -25.83 -0.19 -0.17 16 29 H 0.08 0.23 8.14 -51.93 -0.42 -0.20 16 30 H 0.08 0.17 4.79 -51.93 -0.25 -0.08 16 31 H 0.10 0.43 5.95 -51.93 -0.31 0.12 16 32 H 0.08 -0.08 7.13 -51.93 -0.37 -0.45 16 33 H 0.38 -1.90 8.74 45.56 0.40 -1.50 16 34 H -0.25 -0.16 7.11 56.52 0.40 0.25 16 35 H -0.25 -0.10 7.04 56.52 0.40 0.29 16 36 H 0.18 -0.23 6.31 -52.48 -0.33 -0.57 16 37 H 0.43 -0.67 8.96 -40.82 -0.37 -1.03 16 38 H 0.16 -0.36 6.43 -52.49 -0.34 -0.69 16 39 H 0.40 -1.21 6.80 -40.82 -0.28 -1.49 16 40 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 41 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 42 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 43 H 0.09 -0.19 7.85 -51.93 -0.41 -0.60 16 44 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 45 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 46 H 0.18 -0.05 8.06 -52.48 -0.42 -0.48 16 47 H 0.09 -0.02 7.90 -51.92 -0.41 -0.43 16 48 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 LS Contribution 393.45 15.07 5.93 5.93 Total: 0.00 -12.04 393.45 -11.75 -23.79 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -6.05 Total: -11.61 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -5.73 Total: -4.12 kcal Atomic # 7 Polarization: -3.71 SS G_CDS: -0.33 Total: -4.04 kcal Atomic # 8 Polarization: -3.04 SS G_CDS: -0.34 Total: -3.38 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.24 Total: -6.58 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -12.04 -11.75 -23.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.510 kcal (2) G-P(sol) polarization free energy of solvation -12.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 134.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.751 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.715 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds