Wall clock time and date at job start Sun Mar 7 2021 02:34:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.47178 * 2 1 4 4 C 1.50692 * 109.47106 * 239.99361 * 2 1 3 5 5 C 1.38903 * 119.67300 * 120.00821 * 4 2 1 6 6 C 1.36479 * 120.61584 * 179.97438 * 5 4 2 7 7 C 1.40060 * 119.82930 * 359.97438 * 6 5 4 8 8 C 1.41592 * 133.38464 * 180.02562 * 7 6 5 9 9 C 1.35865 * 107.73254 * 179.97438 * 8 7 6 10 10 C 1.47055 * 125.42763 * 180.02562 * 9 8 7 11 11 O 1.21647 * 120.00356 * 0.02562 * 10 9 8 12 12 N 1.34777 * 120.00193 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00402 * 179.97438 * 12 10 9 14 14 H 1.09005 * 112.84638 * 336.19326 * 13 12 10 15 15 C 1.53785 * 113.69278 * 107.46126 * 13 12 10 16 16 C 1.53779 * 87.07858 * 139.99348 * 15 13 12 17 17 H 1.09007 * 113.68789 * 89.13214 * 16 15 13 18 18 C 1.53006 * 113.61122 * 220.01730 * 16 15 13 19 19 N 1.46500 * 109.47231 * 272.50128 * 18 16 15 20 20 C 1.34945 * 126.03821 * 124.99845 * 19 18 16 21 21 C 1.35319 * 107.74770 * 180.02562 * 20 19 18 22 22 C 1.39877 * 107.91756 * 0.02562 * 21 20 19 23 23 N 1.30833 * 108.20100 * 359.97438 * 22 21 20 24 24 C 1.53771 * 87.08367 * 334.56906 * 16 15 13 25 25 N 1.38148 * 109.14391 * 0.25905 * 9 8 7 26 26 C 1.37489 * 108.79261 * 359.56547 * 25 9 8 27 27 C 1.37710 * 119.68156 * 299.98040 * 4 2 1 28 28 H 0.96695 * 113.99919 * 300.00540 * 1 2 3 29 29 H 1.09004 * 109.46645 * 119.99633 * 2 1 3 30 30 H 1.48498 * 109.99489 * 299.99443 * 3 2 1 31 31 H 1.48498 * 110.00050 * 61.31191 * 3 2 1 32 32 H 1.08004 * 119.69166 * 359.97438 * 5 4 2 33 33 H 1.07999 * 120.08567 * 179.97438 * 6 5 4 34 34 H 1.08001 * 126.13306 * 359.97438 * 8 7 6 35 35 H 0.97005 * 119.99455 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61202 * 25.44472 * 15 13 12 37 37 H 1.09003 * 113.60858 * 254.54452 * 15 13 12 38 38 H 1.08996 * 109.46872 * 152.49871 * 18 16 15 39 39 H 1.08996 * 109.46775 * 32.50030 * 18 16 15 40 40 H 1.07994 * 126.12681 * 0.02720 * 20 19 18 41 41 H 1.07996 * 126.03879 * 180.02562 * 21 20 19 42 42 H 1.07995 * 125.89269 * 180.02562 * 22 21 20 43 43 H 1.09002 * 113.61825 * 139.98242 * 24 16 15 44 44 H 1.09000 * 113.61559 * 270.80012 * 24 16 15 45 45 H 0.97004 * 125.60385 * 179.74210 * 25 9 8 46 46 H 1.07996 * 120.09396 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2303 5 6 2.7297 -0.0291 -2.1402 6 6 3.1955 -0.6539 -3.2605 7 6 2.8678 -1.9949 -3.4976 8 6 3.1836 -2.9043 -4.5358 9 6 2.5870 -4.0894 -4.2435 10 6 2.6620 -5.3070 -5.0648 11 8 3.2993 -5.3036 -6.1010 12 7 2.0246 -6.4268 -4.6695 13 6 2.0987 -7.6396 -5.4879 14 1 2.3179 -7.4308 -6.5351 15 6 2.9835 -8.7414 -4.8812 16 6 1.9227 -9.7470 -5.3590 17 1 2.0928 -10.1154 -6.3707 18 6 1.6469 -10.8695 -4.3565 19 7 2.5880 -11.9691 -4.5834 20 6 3.4101 -12.5133 -3.6621 21 6 4.1144 -13.4974 -4.2677 22 6 3.7091 -13.5561 -5.6052 23 7 2.7940 -12.6406 -5.7955 24 6 0.9092 -8.5929 -5.2858 25 7 1.8944 -3.9669 -3.0545 26 6 2.0589 -2.6885 -2.5759 27 6 1.5950 -2.0291 -1.4414 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 0.8901 30 1 1.5616 2.4677 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 2.9840 1.0049 -1.9593 33 1 3.8153 -0.1158 -3.9624 34 1 3.7900 -2.6937 -5.4044 35 1 1.5167 -6.4297 -3.8431 36 1 3.0719 -8.6824 -3.7964 37 1 3.9463 -8.8522 -5.3800 38 1 0.6271 -11.2312 -4.4876 39 1 1.7700 -10.4893 -3.3425 40 1 3.4914 -12.2167 -2.6269 41 1 4.8580 -14.1262 -3.8008 42 1 4.0859 -14.2397 -6.3515 43 1 0.1973 -8.5839 -6.1112 44 1 0.4294 -8.4942 -4.3121 45 1 1.3790 -4.6683 -2.6263 46 1 0.9745 -2.5506 -0.7277 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:30 Heat of formation + Delta-G solvation = 107.800771 kcal Electronic energy + Delta-G solvation = -29135.215751 eV Core-core repulsion = 24994.751859 eV Total energy + Delta-G solvation = -4140.463893 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.69466 -42.08264 -41.09035 -39.60410 -38.79750 -37.10284 -35.31551 -33.67231 -33.26790 -31.22916 -30.94839 -30.42516 -28.72097 -27.02741 -26.93221 -24.95371 -23.73814 -22.91838 -22.08814 -21.92401 -21.58916 -21.34602 -20.59700 -19.47157 -18.57496 -18.37673 -17.99767 -17.41416 -17.04808 -16.57993 -16.43413 -16.33647 -16.11340 -15.71288 -15.26544 -15.15182 -15.04720 -14.84259 -14.71301 -14.55613 -14.25731 -14.21497 -13.88040 -13.80604 -13.71851 -13.51998 -13.44696 -13.06956 -12.70323 -12.46686 -12.33522 -12.13718 -12.03324 -11.68281 -11.66036 -11.51776 -11.23168 -10.93853 -10.52010 -10.33231 -10.25908 -9.48309 -9.30807 -8.80860 -4.96623 -0.33212 0.53644 0.99260 0.99603 1.25885 1.54726 1.58751 1.75228 1.90156 1.96167 1.99038 2.23561 2.73907 3.17685 3.27651 3.29544 3.34802 3.50246 3.58751 3.61996 3.77226 3.82460 3.91993 3.98358 4.02473 4.18445 4.19183 4.30044 4.30933 4.37475 4.37549 4.45126 4.51722 4.53695 4.60482 4.70799 4.77156 4.83618 4.89162 4.90873 4.96669 5.04166 5.13930 5.25959 5.38702 5.40487 5.55704 5.61890 5.76319 5.96845 6.08298 6.17252 6.32483 6.38281 6.80924 6.96329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.076 4.076 3 Si 0.686 3.314 4 C -0.041 4.041 5 C -0.143 4.143 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.011 3.989 10 C 0.586 3.414 11 O -0.515 6.515 12 N -0.719 5.719 13 C 0.126 3.874 14 H 0.122 0.878 15 C -0.146 4.146 16 C -0.120 4.120 17 H 0.112 0.888 18 C 0.146 3.854 19 N -0.371 5.371 20 C 0.051 3.949 21 C -0.274 4.274 22 C 0.045 3.955 23 N -0.295 5.295 24 C -0.138 4.138 25 N -0.579 5.579 26 C 0.116 3.884 27 C -0.104 4.104 28 H 0.380 0.620 29 H 0.077 0.923 30 H -0.254 1.254 31 H -0.262 1.262 32 H 0.130 0.870 33 H 0.134 0.866 34 H 0.159 0.841 35 H 0.396 0.604 36 H 0.085 0.915 37 H 0.076 0.924 38 H 0.088 0.912 39 H 0.096 0.904 40 H 0.172 0.828 41 H 0.147 0.853 42 H 0.183 0.817 43 H 0.084 0.916 44 H 0.090 0.910 45 H 0.416 0.584 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.159 -0.394 6.444 6.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.043 4.043 5 C -0.161 4.161 6 C -0.068 4.068 7 C -0.122 4.122 8 C -0.124 4.124 9 C -0.098 4.098 10 C 0.373 3.627 11 O -0.390 6.390 12 N -0.370 5.370 13 C 0.022 3.978 14 H 0.140 0.860 15 C -0.185 4.185 16 C -0.139 4.139 17 H 0.130 0.870 18 C 0.025 3.975 19 N -0.154 5.154 20 C -0.095 4.095 21 C -0.304 4.304 22 C -0.141 4.141 23 N -0.116 5.116 24 C -0.176 4.176 25 N -0.184 5.184 26 C 0.006 3.994 27 C -0.124 4.124 28 H 0.228 0.772 29 H 0.095 0.905 30 H -0.178 1.178 31 H -0.188 1.188 32 H 0.147 0.853 33 H 0.151 0.849 34 H 0.176 0.824 35 H 0.230 0.770 36 H 0.104 0.896 37 H 0.095 0.905 38 H 0.106 0.894 39 H 0.114 0.886 40 H 0.189 0.811 41 H 0.165 0.835 42 H 0.200 0.800 43 H 0.103 0.897 44 H 0.108 0.892 45 H 0.254 0.746 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -0.772 0.630 4.308 4.422 hybrid contribution -1.110 -1.036 1.948 2.470 sum -1.883 -0.406 6.256 6.546 Atomic orbital electron populations 1.86593 1.17785 1.80214 1.49815 1.24822 0.84481 1.11175 0.98110 0.94907 0.91739 0.74357 0.80257 1.18930 0.97315 0.92892 0.95129 1.20423 1.00875 0.99753 0.95081 1.20356 0.97872 0.92039 0.96579 1.18222 1.02804 0.94894 0.96255 1.20986 1.01513 0.90307 0.99633 1.20073 1.03471 0.96558 0.89726 1.17237 0.79229 0.81580 0.84642 1.90886 1.41104 1.83629 1.23392 1.45864 1.53319 1.11450 1.26357 1.22533 0.96613 0.81631 0.97061 0.86010 1.23568 0.98890 0.94670 1.01354 1.22705 0.97313 0.92798 1.01106 0.87027 1.21718 0.92109 0.84138 0.99570 1.48692 1.31628 1.27906 1.07154 1.22574 0.93878 0.96681 0.96336 1.21565 1.08438 1.05241 0.95125 1.23939 0.95547 0.97552 0.97085 1.77341 1.20474 1.10206 1.03623 1.23379 0.96761 0.94009 1.03491 1.41859 1.45205 1.11214 1.20117 1.18277 1.00008 0.84648 0.96438 1.19812 1.02264 0.94286 0.96054 0.77218 0.90481 1.17844 1.18760 0.85250 0.84854 0.82356 0.76989 0.89610 0.90493 0.89426 0.88622 0.81130 0.83519 0.80004 0.89700 0.89202 0.74601 0.85694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.32 12.73 -35.23 -0.45 -0.77 16 2 C -0.08 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.69 -0.86 29.75 -169.99 -5.06 -5.92 16 4 C -0.04 -0.04 5.43 -104.57 -0.57 -0.60 16 5 C -0.14 -0.06 8.59 -39.97 -0.34 -0.40 16 6 C -0.05 -0.03 10.06 -39.53 -0.40 -0.43 16 7 C -0.12 -0.23 6.16 -106.93 -0.66 -0.89 16 8 C -0.10 -0.21 10.53 -39.15 -0.41 -0.62 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 1.09 7.80 -12.69 -0.10 0.99 16 11 O -0.52 -2.93 16.44 5.24 0.09 -2.85 16 12 N -0.72 1.15 5.35 -54.21 -0.29 0.86 16 13 C 0.13 -0.17 4.24 -67.12 -0.28 -0.46 16 14 H 0.12 0.09 7.46 -51.93 -0.39 -0.30 16 15 C -0.15 0.24 7.43 -25.92 -0.19 0.04 16 16 C -0.12 0.24 3.87 -89.81 -0.35 -0.10 16 17 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 18 C 0.15 -0.33 6.35 -4.04 -0.03 -0.35 16 19 N -0.37 -0.34 3.68 -61.37 -0.23 -0.56 16 20 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 21 C -0.27 -0.24 10.80 -40.01 -0.43 -0.67 16 22 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 23 N -0.29 -0.99 12.27 30.62 0.38 -0.61 16 24 C -0.14 0.48 7.39 -25.93 -0.19 0.29 16 25 N -0.58 0.41 6.07 -7.36 -0.04 0.36 16 26 C 0.12 0.15 7.25 -83.97 -0.61 -0.46 16 27 C -0.10 -0.10 9.61 -39.42 -0.38 -0.47 16 28 H 0.38 -1.26 8.74 45.56 0.40 -0.87 16 29 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 30 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 31 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 32 H 0.13 -0.20 4.82 -52.48 -0.25 -0.45 16 33 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 34 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 35 H 0.40 -1.80 7.78 -40.82 -0.32 -2.12 16 36 H 0.09 -0.23 7.90 -51.93 -0.41 -0.64 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 38 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.10 -0.45 7.77 -51.93 -0.40 -0.85 16 40 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 41 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 42 H 0.18 -0.12 8.06 -52.49 -0.42 -0.54 16 43 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 44 H 0.09 -0.48 8.08 -51.93 -0.42 -0.90 16 45 H 0.42 -1.66 8.12 -40.82 -0.33 -1.99 16 46 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 388.63 15.07 5.86 5.86 Total: 0.00 -11.08 388.63 -11.52 -22.60 By element: Atomic # 1 Polarization: -8.15 SS G_CDS: -5.95 Total: -14.10 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -5.82 Total: -4.87 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.19 Total: 0.05 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.36 Total: -3.62 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.92 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.08 -11.52 -22.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.405 kcal (2) G-P(sol) polarization free energy of solvation -11.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.522 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.604 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds