Wall clock time and date at job start Sun Mar 7 2021 02:34:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86295 * 109.47350 * 2 1 4 4 C 1.50707 * 109.47194 * 119.99779 * 2 1 3 5 5 C 1.34713 * 125.66250 * 64.99916 * 4 2 1 6 6 C 1.40965 * 107.02577 * 179.72699 * 5 4 2 7 7 C 1.35939 * 106.74217 * 0.41141 * 6 5 4 8 8 C 1.47817 * 125.92862 * 179.85551 * 7 6 5 9 9 C 1.39167 * 120.00061 * 179.71479 * 8 7 6 10 10 C 1.39467 * 119.75964 * 179.97438 * 9 8 7 11 11 C 1.47566 * 120.12080 * 179.97438 * 10 9 8 12 12 O 1.21592 * 119.99773 * 179.97438 * 11 10 9 13 13 N 1.34779 * 120.00168 * 0.02562 * 11 10 9 14 14 C 1.46503 * 119.99706 * 179.97438 * 13 11 10 15 15 H 1.08990 * 112.90815 * 23.75009 * 14 13 11 16 16 C 1.53786 * 113.61097 * 155.00087 * 14 13 11 17 17 C 1.53773 * 87.08092 * 139.97770 * 16 14 13 18 18 H 1.09007 * 113.61482 * 89.19789 * 17 16 14 19 19 C 1.53002 * 113.61574 * 220.01674 * 17 16 14 20 20 N 1.46500 * 109.47148 * 184.99961 * 19 17 16 21 21 C 1.34946 * 126.03644 * 124.95038 * 20 19 17 22 22 C 1.35316 * 107.74870 * 180.02562 * 21 20 19 23 23 C 1.39875 * 107.91722 * 0.02562 * 22 21 20 24 24 N 1.30829 * 108.20298 * 0.02562 * 23 22 21 25 25 C 1.53781 * 113.61192 * 252.49341 * 14 13 11 26 26 C 1.40206 * 119.75819 * 0.25587 * 10 9 8 27 27 O 1.35644 * 120.00683 * 179.74639 * 26 10 9 28 28 C 1.38828 * 119.99209 * 359.46074 * 26 10 9 29 29 C 1.37771 * 120.24252 * 0.56412 * 28 26 10 30 30 O 1.34338 * 125.66721 * 244.97871 * 4 2 1 31 31 H 0.96691 * 113.99909 * 60.00337 * 1 2 3 32 32 H 1.08997 * 109.47298 * 239.99306 * 2 1 3 33 33 H 1.48502 * 110.00093 * 298.68128 * 3 2 1 34 34 H 1.48509 * 110.00041 * 59.99777 * 3 2 1 35 35 H 1.08003 * 126.48567 * 359.97438 * 5 4 2 36 36 H 1.08008 * 126.62954 * 180.25631 * 6 5 4 37 37 H 1.08002 * 120.12268 * 359.97438 * 9 8 7 38 38 H 0.96993 * 119.99639 * 359.97438 * 13 11 10 39 39 H 1.08997 * 113.61471 * 25.42696 * 16 14 13 40 40 H 1.09001 * 113.61184 * 254.52856 * 16 14 13 41 41 H 1.08996 * 109.46833 * 64.99953 * 19 17 16 42 42 H 1.08993 * 109.46978 * 305.00429 * 19 17 16 43 43 H 1.07999 * 126.12479 * 0.04451 * 21 20 19 44 44 H 1.07999 * 126.03957 * 180.26092 * 22 21 20 45 45 H 1.08004 * 125.89555 * 179.97438 * 23 22 21 46 46 H 1.08999 * 113.61060 * 105.47061 * 25 14 13 47 47 H 1.09000 * 113.61767 * 334.57303 * 25 14 13 48 48 H 0.96696 * 113.99940 * 89.99557 * 27 26 10 49 49 H 1.08004 * 119.87516 * 180.27676 * 28 26 10 50 50 H 1.08005 * 119.87428 * 179.71665 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7571 -2.0168 1.5094 6 6 2.3873 -2.2625 2.7462 7 6 2.9088 -1.0780 3.1621 8 6 3.6596 -0.8532 4.4154 9 6 4.1456 0.4154 4.7174 10 6 4.8529 0.6220 5.9015 11 6 5.3722 1.9638 6.2294 12 8 5.9882 2.1414 7.2626 13 7 5.1629 2.9925 5.3843 14 6 5.6780 4.3247 5.7102 15 1 6.5240 4.2961 6.3967 16 6 5.9152 5.2121 4.4768 17 6 5.3507 6.3783 5.3050 18 1 6.1075 6.9122 5.8799 19 6 4.4419 7.3143 4.5057 20 7 4.0532 8.4512 5.3440 21 6 4.2241 9.7553 5.0420 22 6 3.7353 10.4845 6.0717 23 6 3.2496 9.5956 7.0363 24 7 3.4404 8.3765 6.6015 25 6 4.5842 5.3244 6.1215 26 6 5.0739 -0.4511 6.7763 27 8 5.7656 -0.2570 7.9269 28 6 4.5795 -1.7112 6.4678 29 6 3.8812 -1.9152 5.2978 30 8 2.6277 -0.1462 2.2313 31 1 -0.3933 0.4416 -0.7650 32 1 1.7924 -0.5139 -0.8899 33 1 1.5880 2.4585 -1.2242 34 1 1.5615 2.4679 1.2085 35 1 1.2367 -2.7399 0.8989 36 1 2.4428 -3.2084 3.2645 37 1 3.9756 1.2370 4.0373 38 1 4.6712 2.8508 4.5603 39 1 5.2958 4.9445 3.6208 40 1 6.9678 5.3290 4.2189 41 1 3.5496 6.7731 4.1910 42 1 4.9758 7.6764 3.6272 43 1 4.6706 10.1467 4.1400 44 1 3.7193 11.5625 6.1357 45 1 2.7961 9.8685 7.9778 46 1 4.5623 5.5318 7.1913 47 1 3.6010 5.0875 5.7151 48 1 5.2128 -0.0125 8.6816 49 1 4.7470 -2.5355 7.1452 50 1 3.5032 -2.8990 5.0615 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:40 Heat of formation + Delta-G solvation = 56.276275 kcal Electronic energy + Delta-G solvation = -35813.109344 eV Core-core repulsion = 30970.246568 eV Total energy + Delta-G solvation = -4842.862776 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.70411 -42.05257 -41.57112 -40.45441 -38.96745 -38.19588 -37.81206 -35.13461 -34.24448 -33.66959 -32.81526 -32.20292 -30.90877 -30.15730 -28.54340 -26.80216 -26.39634 -25.64997 -24.13911 -23.39467 -22.75583 -21.91204 -21.77805 -21.39208 -21.28380 -20.72347 -19.54531 -18.95475 -18.87285 -18.27217 -17.82389 -17.36824 -17.08140 -16.64100 -16.57358 -16.54210 -16.25690 -15.92973 -15.84922 -15.52580 -15.43329 -15.11551 -14.88719 -14.64532 -14.49067 -14.30615 -14.11372 -13.99825 -13.98095 -13.63963 -13.61968 -13.51595 -13.43980 -13.20596 -13.09738 -12.97995 -12.83868 -12.26147 -12.13464 -11.93115 -11.79035 -11.57074 -11.38304 -11.06214 -10.78469 -10.72947 -10.44447 -10.30548 -10.28002 -9.98618 -9.45839 -8.90529 -5.11467 -0.55958 -0.22110 0.74516 1.02730 1.03626 1.31671 1.47369 1.59876 1.64904 1.83274 1.95242 2.02459 2.09117 2.63549 3.07122 3.13737 3.22408 3.35064 3.38103 3.49401 3.58092 3.59683 3.71472 3.77314 3.94212 3.95864 3.97045 3.98660 4.08868 4.10607 4.19956 4.21165 4.28105 4.37112 4.55637 4.58682 4.61217 4.63556 4.70381 4.75189 4.76825 4.82514 4.88380 4.93721 5.00484 5.08470 5.09939 5.14749 5.16815 5.19678 5.40359 5.44419 5.52477 5.79980 6.00034 6.12423 6.20430 6.45778 6.67810 6.85537 7.22807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.038 4.038 3 Si 0.694 3.306 4 C -0.004 4.004 5 C -0.167 4.167 6 C -0.187 4.187 7 C 0.036 3.964 8 C -0.033 4.033 9 C -0.054 4.054 10 C -0.164 4.164 11 C 0.561 3.439 12 O -0.516 6.516 13 N -0.718 5.718 14 C 0.124 3.876 15 H 0.119 0.881 16 C -0.138 4.138 17 C -0.118 4.118 18 H 0.100 0.900 19 C 0.145 3.855 20 N -0.372 5.372 21 C 0.050 3.950 22 C -0.274 4.274 23 C 0.042 3.958 24 N -0.289 5.289 25 C -0.134 4.134 26 C 0.180 3.820 27 O -0.475 6.475 28 C -0.149 4.149 29 C -0.053 4.053 30 O -0.165 6.165 31 H 0.388 0.612 32 H 0.097 0.903 33 H -0.252 1.252 34 H -0.250 1.250 35 H 0.154 0.846 36 H 0.155 0.845 37 H 0.135 0.865 38 H 0.399 0.601 39 H 0.091 0.909 40 H 0.082 0.918 41 H 0.085 0.915 42 H 0.098 0.902 43 H 0.172 0.828 44 H 0.147 0.853 45 H 0.182 0.818 46 H 0.078 0.922 47 H 0.085 0.915 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.132 -0.140 -6.388 6.391 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.147 4.147 3 Si 0.593 3.407 4 C -0.054 4.054 5 C -0.187 4.187 6 C -0.206 4.206 7 C -0.014 4.014 8 C -0.033 4.033 9 C -0.073 4.073 10 C -0.168 4.168 11 C 0.349 3.651 12 O -0.392 6.392 13 N -0.370 5.370 14 C 0.019 3.981 15 H 0.136 0.864 16 C -0.177 4.177 17 C -0.138 4.138 18 H 0.119 0.881 19 C 0.023 3.977 20 N -0.155 5.155 21 C -0.096 4.096 22 C -0.304 4.304 23 C -0.145 4.145 24 N -0.111 5.111 25 C -0.173 4.173 26 C 0.133 3.867 27 O -0.287 6.287 28 C -0.167 4.167 29 C -0.071 4.071 30 O -0.063 6.063 31 H 0.237 0.763 32 H 0.115 0.885 33 H -0.176 1.176 34 H -0.174 1.174 35 H 0.172 0.828 36 H 0.173 0.827 37 H 0.153 0.847 38 H 0.235 0.765 39 H 0.109 0.891 40 H 0.101 0.899 41 H 0.103 0.897 42 H 0.117 0.883 43 H 0.189 0.811 44 H 0.164 0.836 45 H 0.199 0.801 46 H 0.096 0.904 47 H 0.104 0.896 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.667 -0.664 -5.245 5.329 hybrid contribution -1.786 0.612 -0.950 2.114 sum -1.120 -0.052 -6.195 6.296 Atomic orbital electron populations 1.86574 1.16906 1.80368 1.50296 1.23802 0.84907 1.12159 0.93799 0.94640 0.91367 0.73617 0.81059 1.21250 1.00473 0.92501 0.91128 1.21528 1.03359 0.95762 0.98001 1.21849 1.02756 0.98441 0.97565 1.20240 1.03255 0.87424 0.90437 1.17562 1.00163 0.94190 0.91407 1.21285 0.94363 0.96610 0.94999 1.20296 1.04446 0.94279 0.97777 1.18015 0.79580 0.83751 0.83792 1.90838 1.39633 1.84148 1.24551 1.45898 1.57915 1.08865 1.24356 1.22527 0.98106 0.79645 0.97817 0.86361 1.23394 1.02537 0.94554 0.97238 1.22625 0.98579 0.94347 0.98238 0.88139 1.21742 0.99001 0.85451 0.91484 1.48735 1.46647 1.05118 1.15007 1.22602 1.01784 0.84289 1.00916 1.21559 1.11808 1.00857 0.96174 1.23952 0.99998 0.90130 1.00382 1.77397 1.16968 1.22195 0.94492 1.23450 0.98106 0.94054 1.01688 1.18605 0.89237 0.90860 0.88003 1.84745 1.35157 1.90990 1.17823 1.21405 0.99276 0.97364 0.98647 1.21125 0.95570 0.98402 0.91992 1.83885 1.58118 1.37942 1.26356 0.76290 0.88501 1.17618 1.17415 0.82846 0.82699 0.84732 0.76519 0.89067 0.89891 0.89656 0.88329 0.81050 0.83566 0.80109 0.90366 0.89619 0.74134 0.83632 0.84188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.01 12.86 -35.23 -0.45 -0.46 16 2 C -0.04 0.04 2.97 36.01 0.11 0.15 16 3 Si 0.69 -1.26 32.11 -169.99 -5.46 -6.72 16 4 C 0.00 0.00 6.24 -35.55 -0.22 -0.23 16 5 C -0.17 -0.17 10.78 -39.80 -0.43 -0.60 16 6 C -0.19 -0.09 10.26 -39.37 -0.40 -0.50 16 7 C 0.04 0.04 7.03 -36.49 -0.26 -0.22 16 8 C -0.03 -0.01 5.87 -105.03 -0.62 -0.63 16 9 C -0.05 -0.01 9.20 -38.78 -0.36 -0.36 16 10 C -0.16 -0.26 5.88 -104.90 -0.62 -0.88 16 11 C 0.56 1.63 7.76 -12.46 -0.10 1.53 16 12 O -0.52 -3.28 14.74 -16.67 -0.25 -3.53 16 13 N -0.72 0.02 5.30 -54.05 -0.29 -0.26 16 14 C 0.12 -0.03 4.24 -67.11 -0.28 -0.31 16 15 H 0.12 0.20 7.46 -51.93 -0.39 -0.18 16 16 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 17 C -0.12 0.17 3.82 -89.81 -0.34 -0.17 16 18 H 0.10 -0.02 8.14 -51.92 -0.42 -0.44 16 19 C 0.14 -0.25 6.35 -4.04 -0.03 -0.28 16 20 N -0.37 -0.49 3.68 -61.37 -0.23 -0.71 16 21 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 22 C -0.27 -0.32 10.80 -40.01 -0.43 -0.75 16 23 C 0.04 0.09 12.03 -17.37 -0.21 -0.11 16 24 N -0.29 -1.05 12.42 30.63 0.38 -0.67 16 25 C -0.13 -0.01 7.43 -25.92 -0.19 -0.21 16 26 C 0.18 0.28 6.72 -38.62 -0.26 0.03 16 27 O -0.48 -1.13 11.55 -40.58 -0.47 -1.60 16 28 C -0.15 0.07 9.96 -39.53 -0.39 -0.33 16 29 C -0.05 0.05 9.54 -39.15 -0.37 -0.33 16 30 O -0.17 -0.24 8.80 4.60 0.04 -0.20 16 31 H 0.39 -1.71 8.74 45.56 0.40 -1.31 16 32 H 0.10 -0.34 7.96 -51.93 -0.41 -0.75 16 33 H -0.25 0.14 7.11 56.52 0.40 0.54 16 34 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 35 H 0.15 -0.05 8.06 -52.48 -0.42 -0.48 16 36 H 0.16 -0.29 7.25 -52.48 -0.38 -0.67 16 37 H 0.13 -0.24 6.24 -52.49 -0.33 -0.56 16 38 H 0.40 -0.96 6.75 -40.82 -0.28 -1.24 16 39 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 40 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 41 H 0.09 -0.17 7.84 -51.93 -0.41 -0.58 16 42 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 43 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 44 H 0.15 -0.09 8.06 -52.49 -0.42 -0.52 16 45 H 0.18 -0.04 8.06 -52.48 -0.42 -0.46 16 46 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 47 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 48 H 0.40 -0.50 9.06 45.56 0.41 -0.08 16 49 H 0.15 -0.33 8.06 -52.48 -0.42 -0.76 16 50 H 0.14 -0.44 6.96 -52.48 -0.37 -0.81 16 LS Contribution 428.41 15.07 6.46 6.46 Total: 0.00 -12.49 428.41 -11.63 -24.12 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -5.57 Total: -12.25 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -5.79 Total: -4.16 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.13 Total: -1.65 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -1.13 Total: -5.79 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.46 Total: -6.72 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -12.49 -11.63 -24.12 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.394 kcal (2) G-P(sol) polarization free energy of solvation -12.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.117 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds