Wall clock time and date at job start Sun Mar 7 2021 02:34:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86292 * 109.46992 * 2 1 4 4 C 1.50706 * 109.47033 * 239.99648 * 2 1 3 5 5 C 1.34187 * 126.53787 * 105.04705 * 4 2 1 6 6 N 1.36859 * 109.96581 * 179.97438 * 5 4 2 7 7 C 1.37400 * 109.98526 * 359.97438 * 6 5 4 8 8 C 1.39329 * 133.25604 * 180.02562 * 7 6 5 9 9 C 1.36353 * 120.23362 * 179.73887 * 8 7 6 10 10 C 1.40161 * 120.67193 * 0.52493 * 9 8 7 11 11 C 1.47657 * 119.97386 * 179.75731 * 10 9 8 12 12 O 1.21582 * 120.00146 * 179.71833 * 11 10 9 13 13 N 1.34778 * 119.99920 * 359.71875 * 11 10 9 14 14 C 1.46500 * 119.99919 * 180.02562 * 13 11 10 15 15 H 1.09002 * 112.85132 * 25.33083 * 14 13 11 16 16 C 1.53781 * 113.61711 * 156.52821 * 14 13 11 17 17 C 1.53777 * 87.08336 * 140.06028 * 16 14 13 18 18 H 1.09003 * 113.60961 * 89.20081 * 17 16 14 19 19 C 1.53002 * 113.61665 * 220.01809 * 17 16 14 20 20 N 1.46496 * 109.47074 * 185.00090 * 19 17 16 21 21 C 1.34956 * 126.03540 * 124.71606 * 20 19 17 22 22 C 1.35313 * 107.74365 * 179.83784 * 21 20 19 23 23 C 1.39875 * 107.92339 * 0.42670 * 22 21 20 24 24 N 1.30839 * 108.19695 * 359.73395 * 23 22 21 25 25 C 1.53775 * 87.07992 * 334.56762 * 17 16 14 26 26 C 1.39186 * 120.05478 * 359.46990 * 10 9 8 27 27 C 1.39234 * 119.39052 * 0.26306 * 26 10 9 28 28 H 0.96694 * 113.99840 * 60.00540 * 1 2 3 29 29 H 1.09003 * 109.46629 * 120.00005 * 2 1 3 30 30 H 1.48501 * 109.99914 * 298.67587 * 3 2 1 31 31 H 1.48494 * 110.00484 * 60.00037 * 3 2 1 32 32 H 1.08000 * 125.01742 * 359.97438 * 5 4 2 33 33 H 0.97006 * 125.00850 * 180.02562 * 6 5 4 34 34 H 1.07994 * 119.88079 * 359.97438 * 8 7 6 35 35 H 1.08008 * 119.66412 * 180.25192 * 9 8 7 36 36 H 0.96998 * 120.00229 * 359.97438 * 13 11 10 37 37 H 1.08997 * 113.61673 * 254.61577 * 16 14 13 38 38 H 1.09009 * 113.61202 * 25.42807 * 16 14 13 39 39 H 1.09003 * 109.47196 * 305.00417 * 19 17 16 40 40 H 1.09000 * 109.46667 * 65.00012 * 19 17 16 41 41 H 1.08002 * 126.12292 * 0.02562 * 21 20 19 42 42 H 1.07998 * 126.03963 * 180.15835 * 22 21 20 43 43 H 1.07995 * 125.89630 * 179.75763 * 23 22 21 44 44 H 1.08993 * 113.61636 * 270.87622 * 25 17 16 45 45 H 1.09008 * 113.61006 * 139.97865 * 25 17 16 46 46 H 1.07996 * 120.30434 * 180.28051 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.4616 -0.1388 -2.3226 6 7 2.8038 -1.1007 -3.2341 7 6 2.4962 -2.3457 -2.7409 8 6 2.6355 -3.6353 -3.2497 9 6 2.2361 -4.7108 -2.5129 10 6 1.6714 -4.5369 -1.2419 11 6 1.2393 -5.7123 -0.4595 12 8 0.7541 -5.5623 0.6452 13 7 1.3829 -6.9514 -0.9699 14 6 0.9537 -8.1175 -0.1939 15 1 0.1732 -7.8808 0.5293 16 6 0.6398 -9.3506 -1.0574 17 6 1.3224 -10.1913 0.0343 18 1 0.6424 -10.5228 0.8192 19 6 2.1903 -11.3242 -0.5173 20 7 2.6977 -12.1353 0.5921 21 6 2.5470 -13.4688 0.7345 22 6 3.1607 -13.8327 1.8842 23 6 3.6966 -12.6808 2.4694 24 7 3.4196 -11.6628 1.6957 25 6 2.1184 -8.9274 0.3996 26 6 1.5230 -3.2576 -0.7142 27 6 1.9350 -2.1578 -1.4622 28 1 -0.3933 0.4416 -0.7650 29 1 1.7923 -0.5139 0.8900 30 1 1.5880 2.4584 -1.2243 31 1 1.5615 2.4679 1.2084 32 1 2.5981 0.9234 -2.4617 33 1 3.2051 -0.9288 -4.1004 34 1 3.0648 -3.7837 -4.2294 35 1 2.3521 -5.7067 -2.9145 36 1 1.7697 -7.0710 -1.8514 37 1 -0.4265 -9.5515 -1.1606 38 1 1.1666 -9.3610 -2.0117 39 1 1.5930 -11.9494 -1.1810 40 1 3.0285 -10.9025 -1.0721 41 1 2.0318 -14.1278 0.0513 42 1 3.2218 -14.8349 2.2822 43 1 4.2446 -12.6392 3.3991 44 1 3.0506 -8.8228 -0.1555 45 1 2.2458 -8.7866 1.4731 46 1 1.0926 -3.1192 0.2666 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:44 Heat of formation + Delta-G solvation = 106.143193 kcal Electronic energy + Delta-G solvation = -29426.220542 eV Core-core repulsion = 25285.684771 eV Total energy + Delta-G solvation = -4140.535771 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.49669 -42.00746 -41.05603 -39.51850 -37.95141 -37.38704 -35.08286 -33.52398 -33.26356 -30.98910 -30.77982 -30.45644 -28.45285 -26.75863 -26.49338 -25.32519 -23.55635 -23.45291 -21.88416 -21.65315 -21.33166 -20.97042 -20.53384 -19.33874 -18.43010 -18.20412 -17.53668 -17.42176 -16.97234 -16.51525 -16.24245 -15.88947 -15.84895 -15.63556 -15.39869 -15.17636 -15.04493 -14.83985 -14.76811 -14.70482 -14.16380 -13.96666 -13.74551 -13.61654 -13.54787 -13.53682 -13.35483 -12.99298 -12.56531 -12.44908 -12.21380 -12.11045 -11.86548 -11.77439 -11.53070 -11.34176 -10.79652 -10.76668 -10.45870 -10.25264 -9.96014 -9.43220 -9.32940 -8.84064 -4.95811 -0.04655 0.18455 1.06284 1.30272 1.46463 1.55706 1.62858 1.94301 1.99145 2.02153 2.05096 2.23059 2.96801 3.26202 3.40000 3.50210 3.56247 3.60954 3.72479 3.75162 3.80025 3.86663 3.97689 3.99320 4.07420 4.12637 4.23746 4.31031 4.35642 4.42508 4.49816 4.58152 4.60512 4.66618 4.74164 4.78144 4.82571 4.92263 4.97354 5.02153 5.14984 5.19401 5.22281 5.26205 5.38251 5.49001 5.59954 5.62164 5.82715 5.97669 6.15133 6.34286 6.52998 6.58959 6.88362 7.36061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.043 4.043 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.058 3.942 6 N -0.585 5.585 7 C 0.118 3.882 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.565 3.435 12 O -0.536 6.536 13 N -0.719 5.719 14 C 0.123 3.877 15 H 0.116 0.884 16 C -0.138 4.138 17 C -0.119 4.119 18 H 0.100 0.900 19 C 0.145 3.855 20 N -0.372 5.372 21 C 0.049 3.951 22 C -0.275 4.275 23 C 0.041 3.959 24 N -0.288 5.288 25 C -0.134 4.134 26 C 0.008 3.992 27 C -0.102 4.102 28 H 0.373 0.627 29 H 0.116 0.884 30 H -0.260 1.260 31 H -0.255 1.255 32 H 0.176 0.824 33 H 0.421 0.579 34 H 0.127 0.873 35 H 0.128 0.872 36 H 0.399 0.601 37 H 0.081 0.919 38 H 0.090 0.910 39 H 0.098 0.902 40 H 0.086 0.914 41 H 0.172 0.828 42 H 0.146 0.854 43 H 0.182 0.818 44 H 0.086 0.914 45 H 0.077 0.923 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.128 -0.677 -7.738 8.374 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.195 4.195 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.354 3.646 12 O -0.414 6.414 13 N -0.370 5.370 14 C 0.019 3.981 15 H 0.134 0.866 16 C -0.177 4.177 17 C -0.138 4.138 18 H 0.118 0.882 19 C 0.024 3.976 20 N -0.155 5.155 21 C -0.096 4.096 22 C -0.304 4.304 23 C -0.145 4.145 24 N -0.110 5.110 25 C -0.172 4.172 26 C -0.011 4.011 27 C -0.107 4.107 28 H 0.220 0.780 29 H 0.134 0.866 30 H -0.185 1.185 31 H -0.180 1.180 32 H 0.193 0.807 33 H 0.259 0.741 34 H 0.145 0.855 35 H 0.145 0.855 36 H 0.235 0.765 37 H 0.099 0.901 38 H 0.109 0.891 39 H 0.116 0.884 40 H 0.104 0.896 41 H 0.189 0.811 42 H 0.164 0.836 43 H 0.199 0.801 44 H 0.104 0.896 45 H 0.096 0.904 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.763 1.367 -6.786 7.454 hybrid contribution -0.720 -1.223 -1.411 2.001 sum 2.043 0.144 -8.197 8.449 Atomic orbital electron populations 1.86644 1.17911 1.79880 1.48953 1.24375 0.83520 1.10071 0.97339 0.95183 0.91418 0.74115 0.80505 1.20700 1.09001 0.91937 0.97820 1.21750 1.01037 0.94441 0.89590 1.41733 1.54633 1.04152 1.18188 1.18438 0.99883 0.86502 0.94210 1.19657 1.05866 0.88851 1.01096 1.20573 0.96728 0.98296 0.93019 1.19556 1.08121 0.93312 0.96319 1.18218 0.77752 0.82957 0.85702 1.90801 1.44325 1.86049 1.20191 1.45849 1.64549 1.05560 1.21048 1.22498 0.98124 0.82931 0.94594 0.86572 1.23379 1.01859 0.94612 0.97816 1.22631 0.98266 0.93732 0.99217 0.88206 1.21740 0.97727 0.92713 0.85446 1.48738 1.42642 1.05535 1.18570 1.22604 1.01664 0.85695 0.99682 1.21556 1.09785 1.00444 0.98621 1.23954 1.00116 0.90529 0.99875 1.77405 1.13950 1.23102 0.96527 1.23441 0.97588 0.93475 1.02726 1.20711 0.92360 0.89204 0.98854 1.18917 1.04521 0.92921 0.94305 0.77975 0.86580 1.18501 1.17991 0.80704 0.74134 0.85470 0.85472 0.76526 0.90051 0.89140 0.88401 0.89607 0.81068 0.83584 0.80104 0.89572 0.90390 0.84327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.24 12.88 -35.23 -0.45 -1.69 16 2 C -0.04 -0.02 3.06 36.01 0.11 0.09 16 3 Si 0.69 -0.90 30.82 -169.99 -5.24 -6.13 16 4 C -0.19 -0.13 5.58 -102.69 -0.57 -0.70 16 5 C 0.06 -0.09 10.43 -16.73 -0.17 -0.27 16 6 N -0.58 1.10 6.05 -10.61 -0.06 1.04 16 7 C 0.12 0.06 7.27 -83.95 -0.61 -0.55 16 8 C -0.13 0.09 10.00 -39.85 -0.40 -0.31 16 9 C -0.07 0.02 9.46 -39.54 -0.37 -0.35 16 10 C -0.17 -0.41 5.87 -104.98 -0.62 -1.03 16 11 C 0.57 2.10 7.76 -12.41 -0.10 2.00 16 12 O -0.54 -4.17 15.95 5.29 0.08 -4.09 16 13 N -0.72 -0.17 5.31 -54.02 -0.29 -0.46 16 14 C 0.12 0.03 4.22 -67.12 -0.28 -0.26 16 15 H 0.12 0.27 7.50 -51.93 -0.39 -0.12 16 16 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 17 C -0.12 0.15 3.83 -89.81 -0.34 -0.20 16 18 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 19 C 0.15 -0.25 6.35 -4.04 -0.03 -0.27 16 20 N -0.37 -0.51 3.68 -61.36 -0.23 -0.74 16 21 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 22 C -0.27 -0.34 10.80 -40.01 -0.43 -0.77 16 23 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 24 N -0.29 -1.08 12.42 30.63 0.38 -0.70 16 25 C -0.13 -0.06 7.43 -25.92 -0.19 -0.25 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 27 C -0.10 -0.24 6.34 -105.15 -0.67 -0.91 16 28 H 0.37 -0.31 8.70 45.56 0.40 0.08 16 29 H 0.12 0.08 7.96 -51.93 -0.41 -0.34 16 30 H -0.26 0.07 7.00 56.52 0.40 0.47 16 31 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 32 H 0.18 -0.76 6.27 -52.49 -0.33 -1.09 16 33 H 0.42 -2.07 8.96 -40.82 -0.37 -2.44 16 34 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 35 H 0.13 -0.44 6.36 -52.48 -0.33 -0.77 16 36 H 0.40 -1.08 6.71 -40.82 -0.27 -1.36 16 37 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 38 H 0.09 -0.40 8.07 -51.92 -0.42 -0.82 16 39 H 0.10 -0.40 8.07 -51.93 -0.42 -0.82 16 40 H 0.09 -0.18 7.84 -51.93 -0.41 -0.59 16 41 H 0.17 -0.51 8.06 -52.49 -0.42 -0.93 16 42 H 0.15 -0.08 8.06 -52.49 -0.42 -0.51 16 43 H 0.18 -0.03 8.06 -52.49 -0.42 -0.45 16 44 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 45 H 0.08 0.22 8.14 -51.92 -0.42 -0.20 16 46 H 0.14 0.66 7.64 -52.49 -0.40 0.26 16 LS Contribution 388.78 15.07 5.86 5.86 Total: 0.00 -11.72 388.78 -11.53 -23.25 By element: Atomic # 1 Polarization: -6.17 SS G_CDS: -5.93 Total: -12.10 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -5.65 Total: -4.23 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.20 Total: -0.86 kcal Atomic # 8 Polarization: -5.41 SS G_CDS: -0.37 Total: -5.78 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.24 Total: -6.13 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.72 -11.53 -23.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.390 kcal (2) G-P(sol) polarization free energy of solvation -11.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds