Wall clock time and date at job start Sun Mar 7 2021 02:34:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.47040 * 2 1 4 4 C 1.50706 * 109.46702 * 240.00171 * 2 1 3 5 5 C 1.38566 * 120.32088 * 119.99992 * 4 2 1 6 6 N 1.31516 * 120.89780 * 180.02562 * 5 4 2 7 7 C 1.32708 * 121.64851 * 359.97438 * 6 5 4 8 8 C 1.48173 * 119.72787 * 179.97438 * 7 6 5 9 9 O 1.21516 * 120.00446 * 180.02562 * 8 7 6 10 10 N 1.34776 * 119.99844 * 359.97438 * 8 7 6 11 11 C 1.46493 * 120.00400 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85153 * 23.80336 * 11 10 8 13 13 C 1.53780 * 113.61842 * 155.00235 * 11 10 8 14 14 C 1.53782 * 87.08407 * 139.98097 * 13 11 10 15 15 H 1.09001 * 113.61611 * 89.11707 * 14 13 11 16 16 C 1.53003 * 113.61652 * 219.93608 * 14 13 11 17 17 N 1.46497 * 109.47280 * 185.00009 * 16 14 13 18 18 C 1.34940 * 126.03839 * 124.99998 * 17 16 14 19 19 C 1.35315 * 107.74961 * 179.97438 * 18 17 16 20 20 C 1.39869 * 107.91839 * 0.02562 * 19 18 17 21 21 N 1.30842 * 108.20186 * 359.74285 * 20 19 18 22 22 C 1.53786 * 87.08088 * 334.56771 * 14 13 11 23 23 C 1.39307 * 120.55270 * 0.02562 * 7 6 5 24 24 C 1.38592 * 119.05936 * 359.72778 * 23 7 6 25 25 H 0.96696 * 113.99911 * 59.99999 * 1 2 3 26 26 H 1.09000 * 109.46890 * 120.00330 * 2 1 3 27 27 H 1.48501 * 110.00188 * 298.68427 * 3 2 1 28 28 H 1.48498 * 109.99815 * 60.00030 * 3 2 1 29 29 H 1.08000 * 119.54498 * 0.02562 * 5 4 2 30 30 H 0.97008 * 119.99716 * 0.02562 * 10 8 7 31 31 H 1.09004 * 113.61553 * 254.52925 * 13 11 10 32 32 H 1.09002 * 113.61559 * 25.34571 * 13 11 10 33 33 H 1.09004 * 109.46859 * 305.00245 * 16 14 13 34 34 H 1.09005 * 109.47047 * 64.99382 * 16 14 13 35 35 H 1.08000 * 126.12876 * 359.95546 * 18 17 16 36 36 H 1.07998 * 126.04644 * 179.97438 * 19 18 17 37 37 H 1.07996 * 125.90227 * 179.97438 * 20 19 18 38 38 H 1.09000 * 113.61346 * 270.88412 * 22 14 13 39 39 H 1.08997 * 113.61578 * 139.97930 * 22 14 13 40 40 H 1.08008 * 120.47187 * 180.02562 * 23 7 6 41 41 H 1.08004 * 120.75555 * 180.29605 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7283 -0.0434 -2.1471 6 7 3.1724 -0.6522 -3.2249 7 6 2.8790 -1.9213 -3.4787 8 6 3.4018 -2.5650 -4.7066 9 8 3.1359 -3.7266 -4.9442 10 7 4.1715 -1.8617 -5.5607 11 6 4.6880 -2.4978 -6.7750 12 1 4.0870 -3.3487 -7.0956 13 6 5.0008 -1.5037 -7.9059 14 6 6.2547 -2.3464 -8.1934 15 1 6.0832 -3.1567 -8.9020 16 6 7.4900 -1.5106 -8.5344 17 7 8.5935 -2.3994 -8.9066 18 6 9.3010 -2.3488 -10.0545 19 6 10.2265 -3.3350 -10.0125 20 6 10.0792 -4.0119 -8.7973 21 7 9.1040 -3.4486 -8.1314 22 6 6.1967 -2.7917 -6.7226 23 6 2.0826 -2.6532 -2.6008 24 6 1.6047 -2.0389 -1.4540 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4678 1.2085 29 1 2.9883 0.9904 -1.9738 30 1 4.3835 -0.9342 -5.3712 31 1 4.2701 -1.5183 -8.7146 32 1 5.2216 -0.4963 -7.5531 33 1 7.2608 -0.8470 -9.3683 34 1 7.7781 -0.9172 -7.6666 35 1 9.1546 -1.6471 -10.8624 36 1 10.9505 -3.5604 -10.7815 37 1 10.6709 -4.8518 -8.4645 38 1 6.7458 -2.1367 -6.0461 39 1 6.4313 -3.8459 -6.5759 40 1 1.8450 -3.6861 -2.8084 41 1 0.9891 -2.5820 -0.7522 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:48 Heat of formation + Delta-G solvation = 84.104029 kcal Electronic energy + Delta-G solvation = -24726.680054 eV Core-core repulsion = 20997.178493 eV Total energy + Delta-G solvation = -3729.501561 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.06382 -41.86138 -40.78967 -39.33586 -38.07626 -35.21089 -34.02602 -33.28255 -32.94303 -30.90990 -28.80627 -27.71876 -26.79325 -25.11863 -24.69179 -23.35628 -21.91869 -21.86880 -21.39357 -20.87049 -19.13060 -18.76613 -18.28057 -17.81046 -16.99894 -16.75762 -16.57977 -16.49618 -16.11057 -16.08237 -15.62243 -15.33911 -14.98699 -14.92665 -14.48309 -14.43176 -14.34192 -13.94247 -13.61866 -13.55344 -13.54668 -13.42219 -13.01063 -12.74073 -12.28789 -12.16665 -11.91466 -11.56577 -11.38528 -11.27564 -11.14407 -10.80785 -10.65174 -10.35843 -10.26777 -10.00301 -9.44608 -5.12874 -0.59654 0.02998 1.04895 1.06245 1.42895 1.59875 1.63101 1.81567 2.02138 2.03648 2.67024 2.91745 3.13646 3.23396 3.36947 3.39064 3.54288 3.64037 3.71032 3.72608 3.89755 3.95031 3.97284 4.08459 4.12487 4.21896 4.29384 4.32200 4.50765 4.57538 4.63462 4.66976 4.76161 4.83405 4.89274 4.92936 4.95040 5.09437 5.17209 5.18854 5.32757 5.51074 5.81243 6.13719 6.17854 6.32174 6.61420 6.86790 7.13846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.074 4.074 3 Si 0.685 3.315 4 C -0.149 4.149 5 C 0.103 3.897 6 N -0.453 5.453 7 C 0.081 3.919 8 C 0.573 3.427 9 O -0.528 6.528 10 N -0.700 5.700 11 C 0.119 3.881 12 H 0.118 0.882 13 C -0.137 4.137 14 C -0.118 4.118 15 H 0.100 0.900 16 C 0.145 3.855 17 N -0.372 5.372 18 C 0.050 3.950 19 C -0.275 4.275 20 C 0.042 3.958 21 N -0.289 5.289 22 C -0.133 4.133 23 C -0.108 4.108 24 C -0.053 4.053 25 H 0.378 0.622 26 H 0.126 0.874 27 H -0.255 1.255 28 H -0.251 1.251 29 H 0.164 0.836 30 H 0.412 0.588 31 H 0.081 0.919 32 H 0.092 0.908 33 H 0.098 0.902 34 H 0.087 0.913 35 H 0.172 0.828 36 H 0.146 0.854 37 H 0.182 0.818 38 H 0.087 0.913 39 H 0.078 0.922 40 H 0.153 0.847 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.516 4.673 -1.148 5.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.184 4.184 3 Si 0.585 3.415 4 C -0.151 4.151 5 C -0.056 4.056 6 N -0.164 5.164 7 C -0.057 4.057 8 C 0.358 3.642 9 O -0.404 6.404 10 N -0.350 5.350 11 C 0.014 3.986 12 H 0.136 0.864 13 C -0.176 4.176 14 C -0.138 4.138 15 H 0.118 0.882 16 C 0.023 3.977 17 N -0.155 5.155 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.145 4.145 21 N -0.110 5.110 22 C -0.172 4.172 23 C -0.129 4.129 24 C -0.079 4.079 25 H 0.226 0.774 26 H 0.143 0.857 27 H -0.179 1.179 28 H -0.176 1.176 29 H 0.181 0.819 30 H 0.249 0.751 31 H 0.100 0.900 32 H 0.111 0.889 33 H 0.117 0.883 34 H 0.105 0.895 35 H 0.189 0.811 36 H 0.164 0.836 37 H 0.199 0.801 38 H 0.106 0.894 39 H 0.097 0.903 40 H 0.170 0.830 41 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.922 4.881 -0.295 4.976 hybrid contribution -0.930 -0.163 -0.663 1.154 sum -0.008 4.718 -0.957 4.814 Atomic orbital electron populations 1.86637 1.17204 1.79963 1.49402 1.25024 0.84281 1.11334 0.97782 0.95030 0.91440 0.73969 0.81025 1.21595 0.99262 0.95938 0.98339 1.22614 0.94025 0.99773 0.89202 1.67508 1.20400 1.09100 1.19430 1.21185 0.97836 0.90679 0.96032 1.17892 0.78297 0.85670 0.82333 1.90820 1.58650 1.16066 1.74817 1.45797 1.50833 1.16120 1.22280 1.22604 0.94897 0.97139 0.83921 0.86422 1.23383 0.97006 0.98731 0.98468 1.22625 0.93402 0.99113 0.98636 0.88177 1.21741 0.83351 0.90222 1.02343 1.48735 1.27255 1.25985 1.13515 1.22601 0.94730 1.00922 0.91342 1.21556 1.06033 1.01470 1.01357 1.23952 0.96516 1.00224 0.93774 1.77402 1.13785 1.01243 1.18619 1.23444 0.95230 1.03283 0.95205 1.22240 0.95267 1.02138 0.93235 1.21563 0.96397 0.93624 0.96286 0.77429 0.85659 1.17948 1.17569 0.81896 0.75149 0.89993 0.88922 0.88339 0.89527 0.81057 0.83578 0.80111 0.89405 0.90331 0.82962 0.83431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.25 12.78 -35.23 -0.45 -0.20 16 2 C -0.07 0.15 2.83 36.01 0.10 0.25 16 3 Si 0.69 -1.86 29.82 -169.99 -5.07 -6.93 16 4 C -0.15 0.18 5.40 -104.36 -0.56 -0.38 16 5 C 0.10 -0.10 9.84 -17.57 -0.17 -0.27 16 6 N -0.45 -0.32 9.54 -9.80 -0.09 -0.42 16 7 C 0.08 0.15 6.75 -83.01 -0.56 -0.41 16 8 C 0.57 1.70 7.81 -12.18 -0.10 1.60 16 9 O -0.53 -3.19 15.92 5.35 0.09 -3.10 16 10 N -0.70 -0.28 5.34 -53.86 -0.29 -0.57 16 11 C 0.12 -0.02 4.24 -67.12 -0.28 -0.31 16 12 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 13 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 14 C -0.12 0.18 3.83 -89.80 -0.34 -0.16 16 15 H 0.10 -0.03 8.14 -51.93 -0.42 -0.46 16 16 C 0.14 -0.27 6.35 -4.04 -0.03 -0.29 16 17 N -0.37 -0.44 3.68 -61.36 -0.23 -0.66 16 18 C 0.05 0.01 11.45 -17.23 -0.20 -0.19 16 19 C -0.27 -0.28 10.80 -40.01 -0.43 -0.72 16 20 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 21 N -0.29 -1.01 12.42 30.62 0.38 -0.63 16 22 C -0.13 0.00 7.43 -25.91 -0.19 -0.20 16 23 C -0.11 -0.10 9.63 -39.05 -0.38 -0.47 16 24 C -0.05 0.03 9.77 -39.31 -0.38 -0.35 16 25 H 0.38 -1.21 8.70 45.56 0.40 -0.82 16 26 H 0.13 -0.36 7.96 -51.93 -0.41 -0.78 16 27 H -0.25 0.23 7.11 56.52 0.40 0.63 16 28 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 29 H 0.16 -0.55 4.89 -52.49 -0.26 -0.80 16 30 H 0.41 -0.49 8.06 -40.82 -0.33 -0.82 16 31 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 32 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 33 H 0.10 -0.42 8.07 -51.93 -0.42 -0.84 16 34 H 0.09 -0.19 7.85 -51.93 -0.41 -0.60 16 35 H 0.17 -0.53 8.06 -52.49 -0.42 -0.96 16 36 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.18 -0.07 8.06 -52.49 -0.42 -0.49 16 38 H 0.09 0.00 7.90 -51.93 -0.41 -0.41 16 39 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 40 H 0.15 0.10 7.64 -52.48 -0.40 -0.30 16 41 H 0.15 -0.28 8.06 -52.48 -0.42 -0.70 16 LS Contribution 352.55 15.07 5.31 5.31 Total: 0.00 -9.14 352.55 -9.48 -18.62 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -5.20 Total: -9.61 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -3.93 Total: -1.83 kcal Atomic # 7 Polarization: -2.04 SS G_CDS: -0.23 Total: -2.27 kcal Atomic # 8 Polarization: -2.93 SS G_CDS: -0.37 Total: -3.30 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.07 Total: -6.93 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -9.14 -9.48 -18.62 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.726 kcal (2) G-P(sol) polarization free energy of solvation -9.144 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 93.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.622 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.104 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds