Wall clock time and date at job start Sun Mar 7 2021 02:34:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.47040 * 2 1 4 4 C 1.50706 * 109.46702 * 240.00171 * 2 1 3 5 5 C 1.38566 * 120.32088 * 119.99992 * 4 2 1 6 6 N 1.31516 * 120.89780 * 180.02562 * 5 4 2 7 7 C 1.32708 * 121.64851 * 359.97438 * 6 5 4 8 8 C 1.48173 * 119.72787 * 179.97438 * 7 6 5 9 9 O 1.21516 * 120.00446 * 180.02562 * 8 7 6 10 10 N 1.34776 * 119.99844 * 359.97438 * 8 7 6 11 11 C 1.46493 * 120.00400 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85153 * 23.80336 * 11 10 8 13 13 C 1.53780 * 113.61842 * 155.00235 * 11 10 8 14 14 C 1.53782 * 87.08407 * 139.98097 * 13 11 10 15 15 H 1.09001 * 113.61611 * 89.11707 * 14 13 11 16 16 C 1.53003 * 113.61652 * 219.93608 * 14 13 11 17 17 N 1.46497 * 109.47280 * 185.00009 * 16 14 13 18 18 C 1.34940 * 126.03839 * 124.99998 * 17 16 14 19 19 C 1.35315 * 107.74961 * 179.97438 * 18 17 16 20 20 C 1.39869 * 107.91839 * 0.02562 * 19 18 17 21 21 N 1.30842 * 108.20186 * 359.74285 * 20 19 18 22 22 C 1.53786 * 87.08088 * 334.56771 * 14 13 11 23 23 C 1.39307 * 120.55270 * 0.02562 * 7 6 5 24 24 C 1.38592 * 119.05936 * 359.72778 * 23 7 6 25 25 H 0.96696 * 113.99911 * 59.99999 * 1 2 3 26 26 H 1.09000 * 109.46890 * 120.00330 * 2 1 3 27 27 H 1.48501 * 110.00188 * 298.68427 * 3 2 1 28 28 H 1.48498 * 109.99815 * 60.00030 * 3 2 1 29 29 H 1.08000 * 119.54498 * 0.02562 * 5 4 2 30 30 H 0.97008 * 119.99716 * 0.02562 * 10 8 7 31 31 H 1.09004 * 113.61553 * 254.52925 * 13 11 10 32 32 H 1.09002 * 113.61559 * 25.34571 * 13 11 10 33 33 H 1.09004 * 109.46859 * 305.00245 * 16 14 13 34 34 H 1.09005 * 109.47047 * 64.99382 * 16 14 13 35 35 H 1.08000 * 126.12876 * 359.95546 * 18 17 16 36 36 H 1.07998 * 126.04644 * 179.97438 * 19 18 17 37 37 H 1.07996 * 125.90227 * 179.97438 * 20 19 18 38 38 H 1.09000 * 113.61346 * 270.88412 * 22 14 13 39 39 H 1.08997 * 113.61578 * 139.97930 * 22 14 13 40 40 H 1.08008 * 120.47187 * 180.02562 * 23 7 6 41 41 H 1.08004 * 120.75555 * 180.29605 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7283 -0.0434 -2.1471 6 7 3.1724 -0.6522 -3.2249 7 6 2.8790 -1.9213 -3.4787 8 6 3.4018 -2.5650 -4.7066 9 8 3.1359 -3.7266 -4.9442 10 7 4.1715 -1.8617 -5.5607 11 6 4.6880 -2.4978 -6.7750 12 1 4.0870 -3.3487 -7.0956 13 6 5.0008 -1.5037 -7.9059 14 6 6.2547 -2.3464 -8.1934 15 1 6.0832 -3.1567 -8.9020 16 6 7.4900 -1.5106 -8.5344 17 7 8.5935 -2.3994 -8.9066 18 6 9.3010 -2.3488 -10.0545 19 6 10.2265 -3.3350 -10.0125 20 6 10.0792 -4.0119 -8.7973 21 7 9.1040 -3.4486 -8.1314 22 6 6.1967 -2.7917 -6.7226 23 6 2.0826 -2.6532 -2.6008 24 6 1.6047 -2.0389 -1.4540 25 1 -0.3933 0.4417 -0.7650 26 1 1.7923 -0.5139 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4678 1.2085 29 1 2.9883 0.9904 -1.9738 30 1 4.3835 -0.9342 -5.3712 31 1 4.2701 -1.5183 -8.7146 32 1 5.2216 -0.4963 -7.5531 33 1 7.2608 -0.8470 -9.3683 34 1 7.7781 -0.9172 -7.6666 35 1 9.1546 -1.6471 -10.8624 36 1 10.9505 -3.5604 -10.7815 37 1 10.6709 -4.8518 -8.4645 38 1 6.7458 -2.1367 -6.0461 39 1 6.4313 -3.8459 -6.5759 40 1 1.8450 -3.6861 -2.8084 41 1 0.9891 -2.5820 -0.7522 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:47 Heat of formation + Delta-G solvation = 82.983943 kcal Electronic energy + Delta-G solvation = -24726.728624 eV Core-core repulsion = 20997.178493 eV Total energy + Delta-G solvation = -3729.550131 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.08370 -41.89103 -40.81418 -39.42310 -38.01416 -35.29546 -34.00646 -33.31359 -32.93401 -30.93453 -28.79469 -27.67526 -26.72569 -25.09014 -24.67537 -23.33719 -21.98564 -21.87851 -21.45287 -20.82012 -19.16879 -18.72147 -18.26280 -17.80009 -17.01838 -16.70360 -16.54758 -16.47643 -16.14503 -16.10887 -15.65610 -15.34742 -15.01435 -14.88369 -14.50548 -14.39285 -14.30955 -13.94100 -13.54052 -13.51159 -13.48936 -13.42077 -12.96582 -12.65283 -12.28798 -12.12917 -11.86177 -11.60901 -11.46358 -11.32508 -11.11781 -10.71344 -10.68370 -10.39644 -10.31833 -10.06871 -9.46697 -4.92691 -0.62853 0.05732 1.03473 1.23606 1.50076 1.59676 1.69467 1.95100 1.97042 1.98060 2.62905 2.91972 3.31504 3.33864 3.44528 3.48125 3.60937 3.70563 3.75284 3.77362 3.91075 3.99558 4.09807 4.10942 4.22617 4.31198 4.39499 4.46656 4.58408 4.68727 4.70041 4.78059 4.80876 4.87166 4.93845 4.96145 4.98872 5.03729 5.16281 5.18756 5.35831 5.49319 5.77857 6.21810 6.25378 6.41525 6.59462 6.81861 7.01786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.080 4.080 3 Si 0.768 3.232 4 C -0.140 4.140 5 C 0.102 3.898 6 N -0.458 5.458 7 C 0.064 3.936 8 C 0.567 3.433 9 O -0.571 6.571 10 N -0.686 5.686 11 C 0.111 3.889 12 H 0.096 0.904 13 C -0.115 4.115 14 C -0.109 4.109 15 H 0.085 0.915 16 C 0.139 3.861 17 N -0.377 5.377 18 C 0.053 3.947 19 C -0.294 4.294 20 C 0.025 3.975 21 N -0.331 5.331 22 C -0.133 4.133 23 C -0.118 4.118 24 C -0.053 4.053 25 H 0.388 0.612 26 H 0.137 0.863 27 H -0.274 1.274 28 H -0.300 1.300 29 H 0.189 0.811 30 H 0.421 0.579 31 H 0.092 0.908 32 H 0.116 0.884 33 H 0.132 0.868 34 H 0.092 0.908 35 H 0.207 0.793 36 H 0.160 0.840 37 H 0.193 0.807 38 H 0.090 0.910 39 H 0.047 0.953 40 H 0.146 0.854 41 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.655 6.870 -1.629 7.252 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.189 4.189 3 Si 0.672 3.328 4 C -0.142 4.142 5 C -0.058 4.058 6 N -0.169 5.169 7 C -0.074 4.074 8 C 0.353 3.647 9 O -0.450 6.450 10 N -0.336 5.336 11 C 0.006 3.994 12 H 0.114 0.886 13 C -0.153 4.153 14 C -0.128 4.128 15 H 0.104 0.896 16 C 0.019 3.981 17 N -0.160 5.160 18 C -0.093 4.093 19 C -0.323 4.323 20 C -0.160 4.160 21 N -0.154 5.154 22 C -0.172 4.172 23 C -0.139 4.139 24 C -0.079 4.079 25 H 0.238 0.762 26 H 0.154 0.846 27 H -0.200 1.200 28 H -0.228 1.228 29 H 0.205 0.795 30 H 0.260 0.740 31 H 0.110 0.890 32 H 0.134 0.866 33 H 0.150 0.850 34 H 0.110 0.890 35 H 0.224 0.776 36 H 0.177 0.823 37 H 0.210 0.790 38 H 0.108 0.892 39 H 0.066 0.934 40 H 0.164 0.836 41 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 1.080 7.084 -0.798 7.210 hybrid contribution -1.006 -0.806 -0.448 1.365 sum 0.074 6.278 -1.246 6.400 Atomic orbital electron populations 1.86614 1.17972 1.80374 1.50267 1.25246 0.83740 1.12143 0.97743 0.94094 0.90046 0.71450 0.77228 1.21704 0.98536 0.95559 0.98400 1.23040 0.93496 1.00690 0.88538 1.67498 1.20683 1.08509 1.20190 1.21063 0.98896 0.91408 0.95987 1.18192 0.78272 0.85325 0.82931 1.90788 1.60448 1.17826 1.75902 1.45764 1.49694 1.16325 1.21859 1.22641 0.94197 0.97795 0.84759 0.88634 1.23305 0.96051 0.98807 0.97134 1.22483 0.94534 0.99066 0.96766 0.89618 1.22019 0.82099 0.89957 1.04046 1.48995 1.27708 1.25667 1.13580 1.23199 0.93721 1.00865 0.91546 1.21860 1.07036 1.01971 1.01417 1.24319 0.96522 1.00763 0.94444 1.77334 1.14927 1.02856 1.20243 1.23400 0.95370 1.01492 0.96893 1.22282 0.95648 1.02076 0.93878 1.21725 0.96225 0.94069 0.95847 0.76215 0.84578 1.19963 1.22782 0.79476 0.74005 0.88966 0.86550 0.84997 0.88970 0.77597 0.82272 0.79046 0.89166 0.93379 0.83600 0.82205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.97 12.78 -148.98 -1.90 -0.93 16 2 C -0.08 0.42 2.83 71.24 0.20 0.62 16 3 Si 0.77 -4.99 29.82 68.60 2.05 -2.94 16 4 C -0.14 0.46 5.40 -19.69 -0.11 0.36 16 5 C 0.10 -0.31 9.84 84.82 0.83 0.53 16 6 N -0.46 -0.54 9.54 -184.91 -1.76 -2.31 16 7 C 0.06 0.29 6.75 41.91 0.28 0.58 16 8 C 0.57 4.42 7.81 86.88 0.68 5.10 16 9 O -0.57 -8.60 15.92 -3.77 -0.06 -8.66 16 10 N -0.69 -1.19 5.34 -442.60 -2.37 -3.55 16 11 C 0.11 0.10 4.24 45.52 0.19 0.29 16 12 H 0.10 0.54 7.46 -2.39 -0.02 0.52 16 13 C -0.11 0.75 7.39 31.12 0.23 0.98 16 14 C -0.11 0.32 3.83 -10.26 -0.04 0.29 16 15 H 0.09 0.02 8.14 -2.39 -0.02 0.01 16 16 C 0.14 -0.68 6.35 86.38 0.55 -0.13 16 17 N -0.38 -0.79 3.68 -348.06 -1.28 -2.07 16 18 C 0.05 -0.03 11.45 83.54 0.96 0.92 16 19 C -0.29 -0.62 10.80 21.99 0.24 -0.38 16 20 C 0.02 0.13 12.03 85.24 1.02 1.16 16 21 N -0.33 -2.73 12.42 -57.02 -0.71 -3.44 16 22 C -0.13 -0.22 7.43 31.12 0.23 0.01 16 23 C -0.12 -0.36 9.63 22.61 0.22 -0.14 16 24 C -0.05 0.06 9.77 22.45 0.22 0.28 16 25 H 0.39 -2.79 8.70 -74.06 -0.64 -3.44 16 26 H 0.14 -0.98 7.96 -2.39 -0.02 -1.00 16 27 H -0.27 0.89 7.11 99.48 0.71 1.60 16 28 H -0.30 -0.58 7.11 99.48 0.71 0.13 16 29 H 0.19 -1.63 4.89 -2.91 -0.01 -1.64 16 30 H 0.42 -1.07 8.06 -92.70 -0.75 -1.82 16 31 H 0.09 -0.70 8.14 -2.38 -0.02 -0.72 16 32 H 0.12 -1.26 8.08 -2.39 -0.02 -1.28 16 33 H 0.13 -1.52 8.07 -2.39 -0.02 -1.54 16 34 H 0.09 -0.53 7.85 -2.38 -0.02 -0.55 16 35 H 0.21 -1.82 8.06 -2.91 -0.02 -1.85 16 36 H 0.16 -0.27 8.06 -2.91 -0.02 -0.30 16 37 H 0.19 0.17 8.06 -2.91 -0.02 0.15 16 38 H 0.09 0.09 7.90 -2.39 -0.02 0.07 16 39 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 40 H 0.15 0.54 7.64 -2.91 -0.02 0.51 16 41 H 0.16 -0.65 8.06 -2.91 -0.02 -0.67 16 Total: 0.00 -24.30 352.55 -0.60 -24.91 By element: Atomic # 1 Polarization: -11.18 SS G_CDS: -0.28 Total: -11.46 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: 5.71 Total: 10.46 kcal Atomic # 7 Polarization: -5.25 SS G_CDS: -6.12 Total: -11.37 kcal Atomic # 8 Polarization: -7.63 SS G_CDS: -1.96 Total: -9.60 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: 2.05 Total: -2.94 kcal Total: -24.30 -0.60 -24.91 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.892 kcal (2) G-P(sol) polarization free energy of solvation -24.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.908 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds