Wall clock time and date at job start Sun Mar 7 2021 02:34:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.34664 * 124.84722 * 2 1 4 4 C 1.36774 * 108.39214 * 179.97438 * 3 2 1 5 5 C 1.47269 * 126.93783 * 179.97438 * 4 3 2 6 6 O 1.21630 * 119.99580 * 180.02562 * 5 4 3 7 7 N 1.34771 * 120.00228 * 0.02562 * 5 4 3 8 8 C 1.46493 * 120.00120 * 180.02562 * 7 5 4 9 9 H 1.08993 * 112.85143 * 336.19553 * 8 7 5 10 10 C 1.53789 * 113.61584 * 107.49969 * 8 7 5 11 11 C 1.53788 * 87.08173 * 139.98159 * 10 8 7 12 12 H 1.08997 * 113.69036 * 89.12656 * 11 10 8 13 13 C 1.52997 * 113.61426 * 220.02443 * 11 10 8 14 14 N 1.46502 * 109.46721 * 272.49742 * 13 11 10 15 15 C 1.34946 * 126.03838 * 125.00364 * 14 13 11 16 16 C 1.35316 * 107.74513 * 179.97438 * 15 14 13 17 17 C 1.39869 * 107.92071 * 359.97438 * 16 15 14 18 18 N 1.30833 * 108.20357 * 359.73963 * 17 16 15 19 19 C 1.53780 * 113.61644 * 204.99857 * 8 7 5 20 20 C 1.46686 * 106.11811 * 359.75955 * 4 3 2 21 21 C 1.34485 * 106.32871 * 0.39282 * 20 4 3 22 22 C 1.50707 * 125.56586 * 179.86864 * 21 20 4 23 23 O 1.42903 * 109.46442 * 209.69412 * 22 21 20 24 24 Si 1.86293 * 109.47256 * 329.68979 * 22 21 20 25 25 H 1.08999 * 109.47069 * 270.00552 * 1 2 3 26 26 H 1.08999 * 109.47147 * 30.00628 * 1 2 3 27 27 H 1.09001 * 109.46654 * 150.00782 * 1 2 3 28 28 H 1.07994 * 125.80137 * 359.97206 * 3 2 1 29 29 H 0.97006 * 119.99824 * 359.97438 * 7 5 4 30 30 H 1.08997 * 113.61530 * 254.52988 * 10 8 7 31 31 H 1.09001 * 113.60914 * 25.43307 * 10 8 7 32 32 H 1.08995 * 109.47565 * 32.49358 * 13 11 10 33 33 H 1.08998 * 109.47284 * 152.49972 * 13 11 10 34 34 H 1.08000 * 126.12867 * 359.94978 * 15 14 13 35 35 H 1.08005 * 126.04129 * 179.97438 * 16 15 14 36 36 H 1.08010 * 125.89562 * 180.02562 * 17 16 15 37 37 H 1.09006 * 113.61274 * 334.56601 * 19 8 7 38 38 H 1.09000 * 113.61816 * 105.46923 * 19 8 7 39 39 H 1.08000 * 126.83389 * 180.28414 * 20 4 3 40 40 H 1.08999 * 109.47345 * 89.69482 * 22 21 20 41 41 H 0.96700 * 114.00311 * 60.00230 * 23 22 21 42 42 H 1.48501 * 109.99918 * 58.68485 * 24 22 21 43 43 H 1.48506 * 109.99973 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1052 0.0000 4 6 3.5462 0.7177 0.0006 5 6 4.7284 1.5959 0.0003 6 8 5.8447 1.1129 0.0004 7 7 4.5734 2.9347 -0.0002 8 6 5.7493 3.8082 -0.0011 9 1 6.6373 3.3231 0.4041 10 6 5.9906 4.5153 -1.3453 11 6 6.3666 5.7646 -0.5312 12 1 7.4239 5.8162 -0.2714 13 6 5.8378 7.0690 -1.1309 14 7 6.8032 7.5856 -2.1042 15 6 6.5451 7.8909 -3.3931 16 6 7.6957 8.3346 -3.9502 17 6 8.6909 8.2997 -2.9679 18 7 8.1557 7.8565 -1.8594 19 6 5.4827 5.2010 0.5940 20 6 3.5376 -0.7491 0.0069 21 6 2.2448 -1.1196 0.0007 22 6 1.7399 -2.5396 0.0009 23 8 0.4812 -2.5976 -0.6732 24 14 2.9653 -3.6346 -0.8765 25 1 -0.3633 0.0001 1.0277 26 1 -0.3633 0.8899 -0.5139 27 1 -0.3633 -0.8901 -0.5137 28 1 1.8766 2.1241 -0.0004 29 1 3.6830 3.3199 -0.0006 30 1 6.8215 4.0988 -1.9147 31 1 5.0868 4.6387 -1.9420 32 1 4.8861 6.8809 -1.6278 33 1 5.6945 7.8021 -0.3371 34 1 5.5913 7.7975 -3.8909 35 1 7.8232 8.6585 -4.9726 36 1 9.7220 8.5929 -3.1004 37 1 4.4400 5.5119 0.5274 38 1 5.9035 5.3381 1.5901 39 1 4.3981 -1.4016 0.0132 40 1 1.6178 -2.8816 1.0287 41 1 0.5148 -2.3069 -1.5948 42 1 4.2871 -3.5584 -0.2040 43 1 2.4787 -5.0376 -0.8836 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:34:52 Heat of formation + Delta-G solvation = 98.248683 kcal Electronic energy + Delta-G solvation = -25499.830859 eV Core-core repulsion = 21743.631178 eV Total energy + Delta-G solvation = -3756.199681 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.51253 -42.01712 -40.84168 -39.11923 -37.92863 -35.01985 -33.89163 -33.41549 -31.41924 -30.90595 -28.64328 -27.61821 -26.82360 -26.38773 -24.60310 -23.04588 -22.01307 -21.49611 -21.18552 -20.77083 -20.25325 -19.00425 -18.26778 -17.48365 -17.17225 -16.90920 -16.82155 -16.30471 -16.10872 -15.83922 -15.49843 -15.38720 -15.24011 -14.94967 -14.61198 -14.50381 -14.13821 -14.10016 -13.68905 -13.61478 -13.53566 -13.45361 -13.32027 -13.15160 -12.87654 -12.31328 -12.20562 -11.98116 -11.88550 -11.51904 -11.44777 -10.80670 -10.75073 -10.25062 -9.97872 -9.58471 -9.42634 -9.24801 -5.03364 0.73771 1.02056 1.05295 1.36553 1.61615 1.62578 1.83299 2.01550 2.03985 2.30322 2.65784 3.09108 3.33081 3.41236 3.45876 3.50821 3.72408 3.73611 3.77066 3.89373 3.97477 4.06662 4.14223 4.19079 4.28686 4.32799 4.39196 4.42345 4.51888 4.54785 4.63803 4.68596 4.79742 4.90845 4.92619 4.95608 4.96885 4.98152 5.18505 5.26385 5.56621 5.68071 5.81468 5.93120 6.11156 6.14338 6.26060 6.64786 6.86415 7.45808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.423 5.423 3 C 0.050 3.950 4 C -0.227 4.227 5 C 0.591 3.409 6 O -0.541 6.541 7 N -0.722 5.722 8 C 0.129 3.871 9 H 0.118 0.882 10 C -0.146 4.146 11 C -0.121 4.121 12 H 0.110 0.890 13 C 0.146 3.854 14 N -0.371 5.371 15 C 0.052 3.948 16 C -0.275 4.275 17 C 0.044 3.956 18 N -0.295 5.295 19 C -0.138 4.138 20 C -0.136 4.136 21 C -0.020 4.020 22 C -0.043 4.043 23 O -0.542 6.542 24 Si 0.716 3.284 25 H 0.073 0.927 26 H 0.081 0.919 27 H 0.114 0.886 28 H 0.170 0.830 29 H 0.397 0.603 30 H 0.074 0.926 31 H 0.085 0.915 32 H 0.096 0.904 33 H 0.087 0.913 34 H 0.172 0.828 35 H 0.147 0.853 36 H 0.183 0.817 37 H 0.089 0.911 38 H 0.082 0.918 39 H 0.152 0.848 40 H 0.118 0.882 41 H 0.381 0.619 42 H -0.251 1.251 43 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.510 2.378 -3.053 8.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 N -0.098 5.098 3 C -0.086 4.086 4 C -0.237 4.237 5 C 0.380 3.620 6 O -0.418 6.418 7 N -0.373 5.373 8 C 0.023 3.977 9 H 0.136 0.864 10 C -0.185 4.185 11 C -0.140 4.140 12 H 0.128 0.872 13 C 0.025 3.975 14 N -0.153 5.153 15 C -0.094 4.094 16 C -0.305 4.305 17 C -0.142 4.142 18 N -0.116 5.116 19 C -0.176 4.176 20 C -0.160 4.160 21 C -0.129 4.129 22 C -0.153 4.153 23 O -0.348 6.348 24 Si 0.615 3.385 25 H 0.091 0.909 26 H 0.100 0.900 27 H 0.132 0.868 28 H 0.187 0.813 29 H 0.231 0.769 30 H 0.092 0.908 31 H 0.103 0.897 32 H 0.114 0.886 33 H 0.105 0.895 34 H 0.189 0.811 35 H 0.164 0.836 36 H 0.199 0.801 37 H 0.107 0.893 38 H 0.100 0.900 39 H 0.169 0.831 40 H 0.135 0.865 41 H 0.229 0.771 42 H -0.175 1.175 43 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -6.643 0.714 -1.067 6.766 hybrid contribution -0.940 1.015 -0.319 1.420 sum -7.583 1.729 -1.386 7.900 Atomic orbital electron populations 1.22575 0.76243 1.06054 1.04288 1.43485 1.07016 1.04856 1.54437 1.21914 0.90107 0.91794 1.04816 1.20305 0.91502 0.93932 1.17985 1.17446 0.88079 0.81376 0.75052 1.90793 1.25887 1.75165 1.49972 1.45788 1.09175 1.05750 1.76541 1.22401 0.90162 0.88582 0.96510 0.86442 1.23562 1.02187 0.95469 0.97251 1.22709 1.01677 0.92601 0.97027 0.87227 1.21734 0.89147 0.95488 0.91173 1.48714 1.08009 1.49983 1.08594 1.22572 1.00706 1.00538 0.85633 1.21554 0.92658 1.14381 1.01866 1.23932 1.00505 0.99163 0.90625 1.77344 0.89082 1.21604 1.23606 1.23376 1.00462 0.94809 0.98996 1.21738 0.94969 0.93296 1.06016 1.20749 0.90564 0.89100 1.12504 1.24843 0.93371 0.94904 1.02164 1.86450 1.30057 1.89096 1.29186 0.94072 0.76832 0.77656 0.89940 0.90851 0.89991 0.86765 0.81298 0.76903 0.90766 0.89670 0.88595 0.89518 0.81123 0.83562 0.80053 0.89273 0.89967 0.83063 0.86476 0.77107 1.17481 1.17640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.18 10.71 59.85 0.64 0.46 16 2 N -0.42 0.48 3.09 -119.89 -0.37 0.11 16 3 C 0.05 -0.06 10.83 -16.84 -0.18 -0.24 16 4 C -0.23 -0.44 6.29 -103.35 -0.65 -1.09 16 5 C 0.59 2.02 7.81 -12.59 -0.10 1.92 16 6 O -0.54 -4.24 16.57 5.25 0.09 -4.15 16 7 N -0.72 0.27 5.34 -54.14 -0.29 -0.02 16 8 C 0.13 -0.02 4.24 -67.12 -0.28 -0.31 16 9 H 0.12 0.27 7.46 -51.93 -0.39 -0.12 16 10 C -0.15 0.10 7.43 -25.91 -0.19 -0.09 16 11 C -0.12 0.15 3.87 -89.80 -0.35 -0.20 16 12 H 0.11 0.11 7.97 -51.93 -0.41 -0.31 16 13 C 0.15 -0.25 6.35 -4.04 -0.03 -0.28 16 14 N -0.37 -0.50 3.68 -61.37 -0.23 -0.73 16 15 C 0.05 0.02 11.45 -17.22 -0.20 -0.18 16 16 C -0.28 -0.32 10.80 -40.01 -0.43 -0.75 16 17 C 0.04 0.10 12.02 -17.37 -0.21 -0.11 16 18 N -0.29 -1.12 12.28 30.63 0.38 -0.74 16 19 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 20 C -0.14 -0.31 9.50 -37.50 -0.36 -0.67 16 21 C -0.02 0.00 6.13 -81.86 -0.50 -0.51 16 22 C -0.04 0.05 2.98 36.01 0.11 0.15 16 23 O -0.54 1.16 9.95 -35.23 -0.35 0.81 16 24 Si 0.72 -0.87 31.30 -169.99 -5.32 -6.19 16 25 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.08 -0.46 8.13 -51.93 -0.42 -0.88 16 27 H 0.11 -0.46 4.94 -51.93 -0.26 -0.72 16 28 H 0.17 -0.82 7.45 -52.49 -0.39 -1.21 16 29 H 0.40 -1.41 7.67 -40.82 -0.31 -1.72 16 30 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 31 H 0.08 -0.17 7.90 -51.93 -0.41 -0.58 16 32 H 0.10 -0.41 7.77 -51.93 -0.40 -0.81 16 33 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 35 H 0.15 -0.10 8.06 -52.48 -0.42 -0.52 16 36 H 0.18 -0.06 8.06 -52.48 -0.42 -0.48 16 37 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 39 H 0.15 0.44 6.68 -52.49 -0.35 0.09 16 40 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 41 H 0.38 -2.15 8.38 45.56 0.38 -1.77 16 42 H -0.25 -0.44 6.77 56.52 0.38 -0.05 16 43 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 LS Contribution 361.03 15.07 5.44 5.44 Total: 0.00 -11.13 361.03 -9.55 -20.67 By element: Atomic # 1 Polarization: -7.51 SS G_CDS: -5.98 Total: -13.48 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -2.92 Total: -1.71 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.51 Total: -1.38 kcal Atomic # 8 Polarization: -3.08 SS G_CDS: -0.26 Total: -3.35 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.32 Total: -6.19 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -11.13 -9.55 -20.67 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.923 kcal (2) G-P(sol) polarization free energy of solvation -11.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.549 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.675 kcal (6) G-S(sol) free energy of system = (1) + (5) 98.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds