Wall clock time and date at job start Sun Mar 7 2021 02:35:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.46751 * 2 1 4 4 C 1.50700 * 109.47081 * 120.00077 * 2 1 3 5 5 C 1.38349 * 120.34956 * 65.00304 * 4 2 1 6 6 C 1.40030 * 118.28841 * 179.97438 * 5 4 2 7 7 C 1.47833 * 120.55867 * 180.02562 * 6 5 4 8 8 O 1.21554 * 120.00274 * 0.02562 * 7 6 5 9 9 N 1.34778 * 120.00116 * 179.97438 * 7 6 5 10 10 C 1.46501 * 120.00177 * 180.02562 * 9 7 6 11 11 H 1.08993 * 112.85132 * 23.80107 * 10 9 7 12 12 C 1.53784 * 113.61391 * 155.00155 * 10 9 7 13 13 C 1.53787 * 87.07992 * 140.06505 * 12 10 9 14 14 H 1.08997 * 113.61774 * 89.19917 * 13 12 10 15 15 C 1.52995 * 113.61095 * 220.01981 * 13 12 10 16 16 N 1.46500 * 109.47185 * 183.46994 * 15 13 12 17 17 C 1.34947 * 126.04040 * 125.00042 * 16 15 13 18 18 C 1.35311 * 107.75028 * 180.02562 * 17 16 15 19 19 C 1.39876 * 107.91749 * 359.97438 * 18 17 16 20 20 N 1.30834 * 108.20073 * 0.27043 * 19 18 17 21 21 C 1.53784 * 87.17074 * 334.60625 * 13 12 10 22 22 C 1.39518 * 118.88115 * 0.27093 * 6 5 4 23 23 N 1.31701 * 120.56379 * 359.45736 * 22 6 5 24 24 C 1.31924 * 121.87990 * 0.53737 * 23 22 6 25 25 H 0.96702 * 114.00203 * 60.00313 * 1 2 3 26 26 H 1.09000 * 109.47466 * 240.00187 * 2 1 3 27 27 H 1.48505 * 110.00118 * 60.00115 * 3 2 1 28 28 H 1.48501 * 109.99966 * 181.31732 * 3 2 1 29 29 H 1.08005 * 120.85568 * 359.95710 * 5 4 2 30 30 H 0.96995 * 120.00043 * 359.97438 * 9 7 6 31 31 H 1.08996 * 113.61482 * 25.51005 * 12 10 9 32 32 H 1.09003 * 113.61132 * 254.60915 * 12 10 9 33 33 H 1.09001 * 109.47451 * 63.46847 * 15 13 12 34 34 H 1.09007 * 109.47149 * 303.46597 * 15 13 12 35 35 H 1.08009 * 126.12504 * 0.02894 * 17 16 15 36 36 H 1.08001 * 126.04065 * 180.02562 * 18 17 16 37 37 H 1.08002 * 125.89548 * 179.97438 * 19 18 17 38 38 H 1.09004 * 113.61272 * 139.94686 * 21 13 12 39 39 H 1.09004 * 113.61414 * 270.84138 * 21 13 12 40 40 H 1.07995 * 119.71653 * 179.72685 * 22 6 5 41 41 H 1.08006 * 119.45663 * 179.72717 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6887 -2.0611 1.4058 6 6 2.1757 -2.6779 2.5648 7 6 1.9457 -4.1187 2.8028 8 8 1.3298 -4.7785 1.9887 9 7 2.4199 -4.7009 3.9220 10 6 2.1926 -6.1289 4.1576 11 1 2.0175 -6.6870 3.2379 12 6 3.2390 -6.7752 5.0808 13 6 2.0791 -7.5607 5.7152 14 1 1.8739 -8.5109 5.2222 15 6 2.1868 -7.6913 7.2358 16 7 1.0870 -8.5211 7.7338 17 6 1.2100 -9.6323 8.4896 18 6 -0.0344 -10.1029 8.7368 19 6 -0.9493 -9.2497 8.1110 20 7 -0.2779 -8.3044 7.5049 21 6 1.1564 -6.4181 5.2590 22 6 2.8771 -1.9085 3.4936 23 7 3.0870 -0.6262 3.2789 24 6 2.6405 -0.0188 2.1963 25 1 -0.3934 0.4417 -0.7651 26 1 1.7924 -0.5138 -0.8900 27 1 1.5613 2.4679 1.2085 28 1 3.5345 1.7704 -0.0321 29 1 1.1376 -2.6253 0.6679 30 1 2.9124 -4.1747 4.5711 31 1 3.7140 -6.0704 5.7631 32 1 3.9562 -7.4049 4.5542 33 1 2.1304 -6.7023 7.6904 34 1 3.1384 -8.1562 7.4940 35 1 2.1358 -10.0679 8.8354 36 1 -0.2781 -10.9814 9.3157 37 1 -2.0240 -9.3561 8.1218 38 1 0.1947 -6.7598 4.8762 39 1 1.0610 -5.6155 5.9903 40 1 3.2548 -2.3694 4.3943 41 1 2.8314 1.0357 2.0620 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:05 Heat of formation + Delta-G solvation = 87.132927 kcal Electronic energy + Delta-G solvation = -24815.398286 eV Core-core repulsion = 21086.028069 eV Total energy + Delta-G solvation = -3729.370218 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.137 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.10635 -41.89077 -40.82531 -39.34502 -37.92586 -35.31878 -33.91846 -33.84569 -32.80405 -30.92970 -28.66115 -27.34170 -26.85747 -26.13806 -24.02432 -23.57798 -21.92352 -21.74446 -21.49212 -20.77158 -18.99923 -18.63357 -18.36565 -18.15126 -17.85434 -16.98859 -16.61737 -16.20897 -16.15586 -15.64128 -15.42232 -15.35818 -14.97936 -14.92931 -14.69976 -14.35378 -14.22863 -14.01415 -13.84957 -13.67347 -13.57666 -13.48486 -13.09229 -12.64850 -12.33013 -12.17767 -11.96994 -11.60719 -11.43621 -11.31264 -11.05485 -10.73520 -10.52108 -10.30945 -10.27900 -10.11330 -9.47140 -5.12253 -0.61826 -0.04427 1.02218 1.09909 1.51152 1.57832 1.68507 1.80240 1.94793 2.01430 2.56937 2.94290 3.16576 3.18863 3.30318 3.46242 3.49272 3.61950 3.64746 3.66052 3.72855 3.90641 3.94446 4.00112 4.06397 4.13862 4.17748 4.26382 4.36300 4.50746 4.57571 4.63114 4.73281 4.79527 4.83209 4.87711 4.91562 5.05596 5.09666 5.16180 5.24501 5.42390 5.78844 6.10960 6.30247 6.47477 6.57328 6.84253 7.04405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.132 4.132 5 C 0.015 3.985 6 C -0.187 4.187 7 C 0.567 3.433 8 O -0.526 6.526 9 N -0.714 5.714 10 C 0.122 3.878 11 H 0.119 0.881 12 C -0.137 4.137 13 C -0.118 4.118 14 H 0.100 0.900 15 C 0.145 3.855 16 N -0.373 5.373 17 C 0.050 3.950 18 C -0.274 4.274 19 C 0.042 3.958 20 N -0.289 5.289 21 C -0.133 4.133 22 C 0.138 3.862 23 N -0.477 5.477 24 C 0.123 3.877 25 H 0.387 0.613 26 H 0.081 0.919 27 H -0.246 1.246 28 H -0.250 1.250 29 H 0.154 0.846 30 H 0.400 0.600 31 H 0.091 0.909 32 H 0.082 0.918 33 H 0.086 0.914 34 H 0.098 0.902 35 H 0.172 0.828 36 H 0.147 0.853 37 H 0.182 0.818 38 H 0.079 0.921 39 H 0.087 0.913 40 H 0.163 0.837 41 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.485 0.744 -0.504 3.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.181 4.181 3 Si 0.587 3.413 4 C -0.135 4.135 5 C -0.012 4.012 6 C -0.192 4.192 7 C 0.354 3.646 8 O -0.403 6.403 9 N -0.365 5.365 10 C 0.017 3.983 11 H 0.137 0.863 12 C -0.176 4.176 13 C -0.138 4.138 14 H 0.119 0.881 15 C 0.024 3.976 16 N -0.156 5.156 17 C -0.096 4.096 18 C -0.304 4.304 19 C -0.144 4.144 20 N -0.111 5.111 21 C -0.172 4.172 22 C -0.020 4.020 23 N -0.185 5.185 24 C -0.033 4.033 25 H 0.235 0.765 26 H 0.099 0.901 27 H -0.170 1.170 28 H -0.174 1.174 29 H 0.172 0.828 30 H 0.236 0.764 31 H 0.110 0.890 32 H 0.101 0.899 33 H 0.104 0.896 34 H 0.117 0.883 35 H 0.190 0.810 36 H 0.165 0.835 37 H 0.199 0.801 38 H 0.097 0.903 39 H 0.105 0.895 40 H 0.180 0.820 41 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 4.144 2.170 -0.253 4.684 hybrid contribution -0.111 -1.622 0.500 1.701 sum 4.033 0.548 0.247 4.077 Atomic orbital electron populations 1.86496 1.16703 1.81963 1.49936 1.24611 0.86213 1.10715 0.96566 0.94880 0.80975 0.77699 0.87766 1.20410 1.00967 0.94726 0.97355 1.21627 0.91301 0.93150 0.95086 1.21051 1.04673 0.95203 0.98295 1.17998 0.78808 0.86284 0.81546 1.90818 1.39993 1.64396 1.45053 1.45858 1.57529 1.10650 1.22506 1.22620 0.96474 0.80500 0.98693 0.86317 1.23386 0.96623 0.99262 0.98354 1.22623 0.97738 0.99536 0.93900 0.88138 1.21731 0.86438 0.95396 0.94080 1.48727 1.05514 1.21127 1.40184 1.22605 1.00429 0.89783 0.96773 1.21562 0.91623 1.05598 1.11582 1.23958 1.00565 0.93173 0.96726 1.77397 0.86400 1.23756 1.23512 1.23474 0.98679 0.97373 0.97677 1.23020 0.92296 0.89413 0.97310 1.67704 1.19627 1.10666 1.20461 1.22724 0.92467 0.99540 0.88562 0.76521 0.90096 1.17017 1.17444 0.82817 0.76384 0.89009 0.89883 0.89596 0.88333 0.81041 0.83549 0.80090 0.90259 0.89477 0.82033 0.82849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.82 -35.23 -0.45 -0.32 16 2 C -0.07 0.05 2.81 36.01 0.10 0.15 16 3 Si 0.69 -1.40 29.87 -169.99 -5.08 -6.48 16 4 C -0.13 -0.26 5.39 -104.54 -0.56 -0.82 16 5 C 0.01 0.04 9.38 -38.87 -0.36 -0.33 16 6 C -0.19 -0.37 5.89 -104.82 -0.62 -0.99 16 7 C 0.57 1.48 7.78 -12.33 -0.10 1.39 16 8 O -0.53 -3.33 16.02 5.32 0.09 -3.25 16 9 N -0.71 0.48 5.32 -53.87 -0.29 0.19 16 10 C 0.12 -0.08 4.24 -67.02 -0.28 -0.37 16 11 H 0.12 0.14 7.46 -51.93 -0.39 -0.24 16 12 C -0.14 0.46 7.40 -25.91 -0.19 0.27 16 13 C -0.12 0.21 3.81 -89.81 -0.34 -0.13 16 14 H 0.10 -0.05 8.14 -51.93 -0.42 -0.48 16 15 C 0.14 -0.29 6.33 -4.04 -0.03 -0.32 16 16 N -0.37 -0.42 3.68 -61.36 -0.23 -0.64 16 17 C 0.05 0.01 11.45 -17.23 -0.20 -0.19 16 18 C -0.27 -0.29 10.80 -40.01 -0.43 -0.72 16 19 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 20 N -0.29 -1.01 12.41 30.63 0.38 -0.63 16 21 C -0.13 0.03 7.45 -25.83 -0.19 -0.17 16 22 C 0.14 0.12 10.71 -17.13 -0.18 -0.07 16 23 N -0.48 -1.36 10.35 -12.91 -0.13 -1.50 16 24 C 0.12 0.30 9.84 -17.47 -0.17 0.13 16 25 H 0.39 -2.08 8.74 45.56 0.40 -1.68 16 26 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 27 H -0.25 -0.23 7.05 56.52 0.40 0.17 16 28 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 29 H 0.15 0.40 7.74 -52.48 -0.41 0.00 16 30 H 0.40 -1.41 6.79 -40.82 -0.28 -1.68 16 31 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 33 H 0.09 -0.21 7.87 -51.93 -0.41 -0.62 16 34 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 35 H 0.17 -0.54 8.06 -52.48 -0.42 -0.96 16 36 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.18 -0.06 8.06 -52.49 -0.42 -0.48 16 38 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 39 H 0.09 -0.03 7.92 -51.93 -0.41 -0.44 16 40 H 0.16 -0.46 6.42 -52.49 -0.34 -0.80 16 41 H 0.15 0.21 4.87 -52.48 -0.26 -0.05 16 LS Contribution 350.46 15.07 5.28 5.28 Total: 0.00 -11.10 350.46 -9.27 -20.37 By element: Atomic # 1 Polarization: -5.68 SS G_CDS: -5.07 Total: -10.75 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -3.77 Total: -2.28 kcal Atomic # 7 Polarization: -2.31 SS G_CDS: -0.27 Total: -2.58 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.37 Total: -3.57 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.48 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -11.10 -9.27 -20.37 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.505 kcal (2) G-P(sol) polarization free energy of solvation -11.099 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.372 kcal (6) G-S(sol) free energy of system = (1) + (5) 87.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds