Wall clock time and date at job start Sun Mar 7 2021 02:35:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36417 * 125.79764 * 2 1 4 4 C 1.47375 * 127.19657 * 359.97438 * 3 2 1 5 5 O 1.21612 * 119.99721 * 359.97438 * 4 3 2 6 6 N 1.34781 * 120.00029 * 180.02562 * 4 3 2 7 7 C 1.46501 * 119.99584 * 179.97438 * 6 4 3 8 8 H 1.08996 * 112.84984 * 25.33745 * 7 6 4 9 9 C 1.53780 * 113.60894 * 156.52753 * 7 6 4 10 10 C 1.53780 * 87.07948 * 139.98128 * 9 7 6 11 11 H 1.08997 * 113.61410 * 89.11731 * 10 9 7 12 12 C 1.53001 * 113.61425 * 219.93449 * 10 9 7 13 13 N 1.46496 * 109.46998 * 184.99900 * 12 10 9 14 14 C 1.34950 * 126.03928 * 124.71924 * 13 12 10 15 15 C 1.35315 * 107.74711 * 179.83865 * 14 13 12 16 16 C 1.39864 * 107.92276 * 0.42090 * 15 14 13 17 17 N 1.30841 * 108.19797 * 359.73829 * 16 15 14 18 18 C 1.53778 * 113.61426 * 254.13200 * 7 6 4 19 19 C 1.47027 * 105.61201 * 179.97438 * 3 2 1 20 20 C 1.34179 * 105.95359 * 0.02562 * 19 3 2 21 21 C 1.50697 * 125.43680 * 180.02562 * 20 19 3 22 22 O 1.42900 * 109.47414 * 64.99962 * 21 20 19 23 23 Si 1.86305 * 109.47122 * 185.00079 * 21 20 19 24 24 O 1.33648 * 125.80268 * 179.68788 * 2 1 3 25 25 H 1.09001 * 109.46953 * 89.99899 * 1 2 3 26 26 H 1.09000 * 109.47318 * 209.99497 * 1 2 3 27 27 H 1.09000 * 109.47161 * 330.00128 * 1 2 3 28 28 H 0.96991 * 119.99844 * 359.97438 * 6 4 3 29 29 H 1.08997 * 113.61686 * 254.52790 * 9 7 6 30 30 H 1.08995 * 113.61994 * 25.34749 * 9 7 6 31 31 H 1.09001 * 109.47402 * 305.00009 * 12 10 9 32 32 H 1.09006 * 109.47349 * 64.99976 * 12 10 9 33 33 H 1.08003 * 126.12516 * 359.97438 * 14 13 12 34 34 H 1.08007 * 126.03704 * 180.16001 * 15 14 13 35 35 H 1.07995 * 125.90208 * 179.76204 * 16 15 14 36 36 H 1.09004 * 113.61672 * 334.57289 * 18 7 6 37 37 H 1.09005 * 113.61134 * 105.47049 * 18 7 6 38 38 H 1.07997 * 127.02046 * 180.02562 * 19 3 2 39 39 H 1.09005 * 109.46929 * 304.99774 * 21 20 19 40 40 H 0.96699 * 113.99751 * 60.00178 * 22 21 20 41 41 H 1.48497 * 110.00036 * 179.97438 * 23 21 20 42 42 H 1.48496 * 110.00030 * 301.31887 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8740 2.5158 -0.0005 5 8 0.6890 2.7892 -0.0015 6 7 2.7931 3.5016 -0.0010 7 6 2.3645 4.9025 -0.0021 8 1 1.3725 5.0420 0.4274 9 6 3.4201 5.8699 0.5588 10 6 3.0143 6.8391 -0.5641 11 1 2.1996 7.5091 -0.2893 12 6 4.1980 7.5722 -1.1985 13 7 3.7025 8.5529 -2.1674 14 6 3.9809 9.8734 -2.1736 15 6 3.3364 10.4259 -3.2273 16 6 2.6325 9.4100 -3.8821 17 7 2.8512 8.2868 -3.2475 18 6 2.5530 5.6033 -1.3578 19 6 3.6850 0.5991 0.0006 20 6 3.5859 -0.7390 0.0004 21 6 4.7459 -1.7010 0.0014 22 8 5.4749 -1.5670 1.2231 23 14 4.1071 -3.4443 -0.1526 24 8 2.2889 -1.0839 0.0059 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3634 -0.8900 0.5137 27 1 -0.3633 0.8900 0.5138 28 1 3.7381 3.2835 -0.0006 29 1 3.1880 6.2379 1.5582 30 1 4.4417 5.5005 0.4705 31 1 4.7669 8.0838 -0.4222 32 1 4.8411 6.8531 -1.7059 33 1 4.6078 10.3953 -1.4657 34 1 3.3580 11.4680 -3.5101 35 1 2.0153 9.5315 -4.7599 36 1 3.3373 5.1614 -1.9725 37 1 1.6219 5.7562 -1.9035 38 1 4.5928 1.1841 0.0012 39 1 5.4027 -1.4791 -0.8399 40 1 4.9517 -1.7502 2.0154 41 1 5.2414 -4.4027 -0.1534 42 1 3.1854 -3.7485 0.9712 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:08 Heat of formation + Delta-G solvation = 57.418738 kcal Electronic energy + Delta-G solvation = -25733.741625 eV Core-core repulsion = 21878.052762 eV Total energy + Delta-G solvation = -3855.688862 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.141 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.74247 -42.03268 -40.97693 -39.30885 -38.21024 -35.15468 -34.17107 -33.44304 -33.00139 -30.92108 -29.52486 -28.52970 -26.80930 -26.05415 -24.78984 -23.50563 -22.12677 -21.90364 -21.37679 -21.21128 -20.27919 -18.98469 -18.26453 -17.97517 -17.68877 -17.15805 -16.82215 -16.44597 -16.07581 -15.98413 -15.71548 -15.50735 -15.13838 -14.87563 -14.71615 -14.23613 -14.15714 -14.00539 -13.93771 -13.85173 -13.62791 -13.55732 -13.41959 -13.01377 -12.97095 -12.84830 -12.26296 -12.10679 -11.92469 -11.56845 -11.38343 -11.03186 -10.87646 -10.72010 -10.27889 -10.02827 -9.56564 -9.45660 -5.02625 0.30876 0.82849 1.03795 1.08494 1.41550 1.60203 1.67614 1.88084 2.02732 2.20350 2.36008 3.07013 3.22133 3.32766 3.35758 3.55665 3.69725 3.75947 3.78271 3.94334 3.96293 4.08768 4.12488 4.20555 4.24617 4.28361 4.40462 4.55366 4.55877 4.61916 4.62708 4.70478 4.75118 4.80923 4.88331 4.93898 5.09140 5.10625 5.17158 5.19131 5.23032 5.54023 5.80284 5.90186 6.12594 6.17011 6.51414 6.85800 7.25679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.254 4.254 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.124 3.876 8 H 0.117 0.883 9 C -0.138 4.138 10 C -0.118 4.118 11 H 0.100 0.900 12 C 0.145 3.855 13 N -0.372 5.372 14 C 0.050 3.950 15 C -0.274 4.274 16 C 0.042 3.958 17 N -0.289 5.289 18 C -0.133 4.133 19 C -0.147 4.147 20 C -0.055 4.055 21 C -0.034 4.034 22 O -0.521 6.521 23 Si 0.701 3.299 24 O -0.168 6.168 25 H 0.094 0.906 26 H 0.081 0.919 27 H 0.110 0.890 28 H 0.401 0.599 29 H 0.081 0.919 30 H 0.090 0.910 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.172 0.828 34 H 0.147 0.853 35 H 0.182 0.818 36 H 0.086 0.914 37 H 0.078 0.922 38 H 0.157 0.843 39 H 0.138 0.862 40 H 0.381 0.619 41 H -0.248 1.248 42 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.808 0.563 0.518 2.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.043 3.957 3 C -0.258 4.258 4 C 0.382 3.618 5 O -0.417 6.417 6 N -0.364 5.364 7 C 0.019 3.981 8 H 0.135 0.865 9 C -0.177 4.177 10 C -0.138 4.138 11 H 0.118 0.882 12 C 0.024 3.976 13 N -0.155 5.155 14 C -0.096 4.096 15 C -0.304 4.304 16 C -0.145 4.145 17 N -0.110 5.110 18 C -0.172 4.172 19 C -0.167 4.167 20 C -0.103 4.103 21 C -0.143 4.143 22 O -0.328 6.328 23 Si 0.600 3.400 24 O -0.065 6.065 25 H 0.112 0.888 26 H 0.099 0.901 27 H 0.129 0.871 28 H 0.236 0.764 29 H 0.100 0.900 30 H 0.109 0.891 31 H 0.116 0.884 32 H 0.104 0.896 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.199 0.801 36 H 0.104 0.896 37 H 0.096 0.904 38 H 0.175 0.825 39 H 0.155 0.845 40 H 0.229 0.771 41 H -0.173 1.173 42 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 2.129 -1.542 0.646 2.707 hybrid contribution 1.002 1.614 1.054 2.173 sum 3.131 0.071 1.700 3.564 Atomic orbital electron populations 1.20708 0.83316 1.05370 1.04891 1.22930 0.94085 0.82845 0.95861 1.21136 0.93222 0.93844 1.17638 1.17198 0.85477 0.83737 0.75338 1.90778 1.16546 1.84003 1.50390 1.45739 1.09566 1.05608 1.75503 1.22517 0.99565 0.78645 0.97372 0.86532 1.23374 0.99654 0.95793 0.98850 1.22654 0.98139 0.96041 0.96957 0.88203 1.21735 0.95774 0.90781 0.89344 1.48735 1.37670 1.06316 1.22790 1.22606 1.01513 0.84914 1.00581 1.21558 1.07401 1.01184 1.00248 1.23953 0.99976 0.90339 1.00187 1.77400 1.10939 1.23501 0.99200 1.23468 1.02866 0.94330 0.96511 1.22572 0.96436 0.93493 1.04194 1.22544 0.82919 0.95563 1.09283 1.24355 0.91305 1.08007 0.90683 1.86659 1.39380 1.91548 1.15230 0.94355 0.81386 0.73561 0.90678 1.83682 1.16386 1.35077 1.71402 0.88778 0.90051 0.87123 0.76446 0.90027 0.89116 0.88369 0.89599 0.81059 0.83563 0.80092 0.89580 0.90357 0.82493 0.84489 0.77082 1.17269 1.17965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.01 9.89 36.01 0.36 0.35 16 2 C 0.10 0.17 7.37 -34.96 -0.26 -0.09 16 3 C -0.25 -0.50 6.31 -103.27 -0.65 -1.15 16 4 C 0.59 1.71 7.81 -12.54 -0.10 1.61 16 5 O -0.54 -3.11 14.46 5.27 0.08 -3.03 16 6 N -0.71 -0.01 5.36 -54.11 -0.29 -0.30 16 7 C 0.12 -0.03 4.21 -67.12 -0.28 -0.32 16 8 H 0.12 0.18 7.50 -51.93 -0.39 -0.21 16 9 C -0.14 0.39 7.39 -25.92 -0.19 0.20 16 10 C -0.12 0.18 3.82 -89.72 -0.34 -0.16 16 11 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 12 C 0.14 -0.26 6.35 -4.04 -0.03 -0.29 16 13 N -0.37 -0.46 3.68 -61.36 -0.23 -0.68 16 14 C 0.05 0.01 11.45 -17.22 -0.20 -0.18 16 15 C -0.27 -0.29 10.80 -40.02 -0.43 -0.72 16 16 C 0.04 0.09 12.03 -17.37 -0.21 -0.12 16 17 N -0.29 -1.02 12.42 30.62 0.38 -0.64 16 18 C -0.13 -0.01 7.45 -25.83 -0.19 -0.20 16 19 C -0.15 -0.04 10.48 -37.45 -0.39 -0.43 16 20 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 21 C -0.03 0.04 2.97 36.00 0.11 0.15 16 22 O -0.52 0.08 12.88 -35.23 -0.45 -0.37 16 23 Si 0.70 -0.87 32.09 -169.99 -5.46 -6.33 16 24 O -0.17 -0.21 8.90 7.67 0.07 -0.14 16 25 H 0.09 -0.07 8.14 -51.93 -0.42 -0.50 16 26 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.11 0.15 6.49 -51.93 -0.34 -0.19 16 28 H 0.40 -0.92 7.88 -40.82 -0.32 -1.24 16 29 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.09 -0.39 8.07 -51.93 -0.42 -0.81 16 31 H 0.10 -0.41 8.07 -51.93 -0.42 -0.83 16 32 H 0.09 -0.18 7.86 -51.93 -0.41 -0.59 16 33 H 0.17 -0.52 8.06 -52.48 -0.42 -0.95 16 34 H 0.15 -0.11 8.06 -52.48 -0.42 -0.53 16 35 H 0.18 -0.07 8.06 -52.49 -0.42 -0.49 16 36 H 0.09 0.00 7.91 -51.93 -0.41 -0.41 16 37 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 38 H 0.16 -0.29 7.74 -52.49 -0.41 -0.70 16 39 H 0.14 -0.38 7.96 -51.93 -0.41 -0.79 16 40 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 41 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 42 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 LS Contribution 361.59 15.07 5.45 5.45 Total: 0.00 -9.11 361.59 -9.19 -18.30 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -5.71 Total: -10.66 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -3.03 Total: -1.60 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -0.14 Total: -1.62 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.31 Total: -3.55 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.46 Total: -6.33 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.11 -9.19 -18.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.722 kcal (2) G-P(sol) polarization free energy of solvation -9.113 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.304 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.419 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds