Wall clock time and date at job start Sun Mar 7 2021 02:35:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37791 * 119.84829 * 2 1 4 4 C 1.39702 * 119.90662 * 179.97438 * 3 2 1 5 5 C 1.47541 * 120.18676 * 180.02562 * 4 3 2 6 6 O 1.21597 * 119.99530 * 179.97438 * 5 4 3 7 7 N 1.34770 * 120.00182 * 359.97021 * 5 4 3 8 8 C 1.46507 * 119.99822 * 180.02562 * 7 5 4 9 9 H 1.08997 * 112.85063 * 336.19971 * 8 7 5 10 10 C 1.53779 * 113.60848 * 107.50661 * 8 7 5 11 11 C 1.53789 * 87.07916 * 139.98077 * 10 8 7 12 12 H 1.08997 * 113.68849 * 89.12683 * 11 10 8 13 13 C 1.52997 * 113.61353 * 220.01469 * 11 10 8 14 14 N 1.46499 * 109.47594 * 272.49682 * 13 11 10 15 15 C 1.34947 * 126.03892 * 124.99684 * 14 13 11 16 16 C 1.35311 * 107.74770 * 179.97438 * 15 14 13 17 17 C 1.39880 * 107.91863 * 0.02562 * 16 15 14 18 18 N 1.30835 * 108.19886 * 359.73621 * 17 16 15 19 19 C 1.53778 * 87.07792 * 334.56386 * 11 10 8 20 20 C 1.40135 * 119.62120 * 0.02562 * 4 3 2 21 21 O 1.35647 * 120.15453 * 179.97438 * 20 4 3 22 22 C 1.38709 * 119.69759 * 0.02562 * 20 4 3 23 23 C 1.50701 * 119.95950 * 179.97438 * 22 20 4 24 24 O 1.42900 * 109.46908 * 74.97910 * 23 22 20 25 25 Si 1.86300 * 109.47204 * 194.97764 * 23 22 20 26 26 C 1.38055 * 120.08340 * 359.97438 * 22 20 4 27 27 H 1.09006 * 109.46864 * 270.00001 * 1 2 3 28 28 H 1.08994 * 109.47452 * 30.00272 * 1 2 3 29 29 H 1.09004 * 109.47025 * 150.00474 * 1 2 3 30 30 H 1.08003 * 120.04504 * 0.02562 * 3 2 1 31 31 H 0.97002 * 120.00423 * 0.02562 * 7 5 4 32 32 H 1.09002 * 113.61296 * 254.52677 * 10 8 7 33 33 H 1.08997 * 113.62118 * 25.43410 * 10 8 7 34 34 H 1.08998 * 109.46957 * 32.50049 * 13 11 10 35 35 H 1.09003 * 109.46611 * 152.49574 * 13 11 10 36 36 H 1.08001 * 126.12198 * 0.02562 * 15 14 13 37 37 H 1.07996 * 126.04528 * 180.02562 * 16 15 14 38 38 H 1.07995 * 125.89574 * 180.02562 * 17 16 15 39 39 H 1.08997 * 113.61995 * 270.88005 * 19 11 10 40 40 H 1.09007 * 113.68978 * 139.99003 * 19 11 10 41 41 H 0.96702 * 114.00600 * 270.02448 * 21 20 4 42 42 H 1.08999 * 109.47351 * 314.97963 * 23 22 20 43 43 H 0.96697 * 114.00803 * 59.99849 * 24 23 22 44 44 H 1.48502 * 109.99740 * 180.02562 * 25 23 22 45 45 H 1.48504 * 109.99846 * 301.31832 * 25 23 22 46 46 H 1.08006 * 119.80102 * 179.74660 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 0.0005 5 6 4.3304 2.4726 0.0011 6 8 5.5464 2.4698 0.0021 7 7 3.6592 3.6413 0.0005 8 6 4.3947 4.9084 0.0005 9 1 5.4018 4.8132 0.4063 10 6 4.3378 5.6535 -1.3435 11 6 4.1894 6.9495 -0.5291 12 1 5.1402 7.4144 -0.2687 13 6 3.1888 7.9392 -1.1293 14 7 3.8722 8.7955 -2.1019 15 6 3.5154 8.9744 -3.3910 16 6 4.3974 9.8366 -3.9472 17 6 5.3255 10.1966 -2.9645 18 7 5.0085 9.5772 -1.8566 19 6 3.5991 6.0823 0.5953 20 6 4.2837 -0.0210 0.0005 21 8 5.6401 -0.0322 0.0005 22 6 3.5771 -1.2146 -0.0005 23 6 4.3174 -2.5273 -0.0011 24 8 4.8549 -2.7715 1.3002 25 14 3.1446 -3.9014 -0.4565 26 6 2.1967 -1.2016 -0.0011 27 1 -0.3633 0.0000 1.0277 28 1 -0.3634 0.8899 -0.5138 29 1 -0.3633 -0.8901 -0.5138 30 1 1.6511 2.1294 0.0004 31 1 2.6892 3.6436 0.0001 32 1 5.2660 5.5992 -1.9124 33 1 3.4592 5.4102 -1.9409 34 1 2.3891 7.3907 -1.6268 35 1 2.7671 8.5559 -0.3354 36 1 2.6757 8.5127 -3.8891 37 1 4.3869 10.1853 -4.9693 38 1 6.1570 10.8730 -3.0963 39 1 2.5186 5.9562 0.5281 40 1 3.9300 6.3733 1.5924 41 1 6.0335 -0.0351 -0.8828 42 1 5.1288 -2.4865 -0.7277 43 1 4.1879 -2.8204 1.9986 44 1 3.8623 -5.2014 -0.4600 45 1 2.0167 -3.9470 0.5085 46 1 1.6511 -2.1337 -0.0061 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:35:21 Heat of formation + Delta-G solvation = 29.720032 kcal Electronic energy + Delta-G solvation = -29308.189304 eV Core-core repulsion = 25167.535577 eV Total energy + Delta-G solvation = -4140.653728 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.08797 -41.77028 -40.71286 -39.21695 -38.03397 -37.67947 -35.16039 -33.78067 -33.15085 -32.52367 -30.95158 -28.59917 -27.70949 -26.90229 -26.85187 -25.62351 -23.66115 -22.14623 -22.01589 -21.62810 -21.45545 -20.51273 -19.60809 -18.42533 -18.38552 -17.91496 -17.50844 -16.90610 -16.81125 -16.39468 -16.19580 -16.05336 -15.79986 -15.59949 -15.29522 -14.92657 -14.84896 -14.70195 -14.55799 -14.30819 -14.17951 -13.73732 -13.67946 -13.66512 -13.50087 -13.36167 -13.11413 -12.97481 -12.63733 -12.36092 -12.26721 -11.97222 -11.80038 -11.71114 -11.59018 -11.48365 -10.89151 -10.50518 -10.28699 -10.23696 -10.04253 -9.57647 -9.45781 -5.05959 -0.38255 0.00595 1.02188 1.17610 1.47441 1.57865 1.73118 1.88105 2.01150 2.05763 2.53647 3.13827 3.24432 3.29290 3.34467 3.39867 3.45341 3.53186 3.60077 3.66801 3.82875 3.94431 3.99678 4.01340 4.05913 4.19934 4.26086 4.35083 4.39554 4.44685 4.48504 4.52450 4.58049 4.60929 4.66322 4.76439 4.84844 4.86293 4.89056 4.90778 4.92234 5.10735 5.15591 5.17268 5.25333 5.45528 5.53090 5.78572 6.11109 6.40069 6.41909 6.74278 6.83436 7.20312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.560 3.440 6 O -0.515 6.515 7 N -0.719 5.719 8 C 0.127 3.873 9 H 0.119 0.881 10 C -0.146 4.146 11 C -0.120 4.120 12 H 0.110 0.890 13 C 0.146 3.854 14 N -0.371 5.371 15 C 0.052 3.948 16 C -0.275 4.275 17 C 0.044 3.956 18 N -0.295 5.295 19 C -0.138 4.138 20 C 0.192 3.808 21 O -0.467 6.467 22 C -0.150 4.150 23 C -0.066 4.066 24 O -0.519 6.519 25 Si 0.689 3.311 26 C -0.081 4.081 27 H 0.074 0.926 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.130 0.870 31 H 0.398 0.602 32 H 0.074 0.926 33 H 0.085 0.915 34 H 0.096 0.904 35 H 0.087 0.913 36 H 0.172 0.828 37 H 0.147 0.853 38 H 0.183 0.817 39 H 0.090 0.910 40 H 0.083 0.917 41 H 0.395 0.605 42 H 0.116 0.884 43 H 0.374 0.626 44 H -0.255 1.255 45 H -0.259 1.259 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.722 -0.058 -3.978 9.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.347 3.653 6 O -0.391 6.391 7 N -0.371 5.371 8 C 0.022 3.978 9 H 0.137 0.863 10 C -0.184 4.184 11 C -0.139 4.139 12 H 0.128 0.872 13 C 0.025 3.975 14 N -0.153 5.153 15 C -0.095 4.095 16 C -0.304 4.304 17 C -0.142 4.142 18 N -0.116 5.116 19 C -0.177 4.177 20 C 0.145 3.855 21 O -0.278 6.278 22 C -0.151 4.151 23 C -0.176 4.176 24 O -0.325 6.325 25 Si 0.590 3.410 26 C -0.099 4.099 27 H 0.093 0.907 28 H 0.090 0.910 29 H 0.091 0.909 30 H 0.148 0.852 31 H 0.234 0.766 32 H 0.093 0.907 33 H 0.104 0.896 34 H 0.114 0.886 35 H 0.105 0.895 36 H 0.189 0.811 37 H 0.165 0.835 38 H 0.200 0.800 39 H 0.108 0.892 40 H 0.102 0.898 41 H 0.253 0.747 42 H 0.134 0.866 43 H 0.221 0.779 44 H -0.179 1.179 45 H -0.184 1.184 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -7.462 -1.097 -2.126 7.836 hybrid contribution -0.601 0.513 -0.230 0.823 sum -8.063 -0.585 -2.356 8.420 Atomic orbital electron populations 1.20837 0.90033 1.03536 1.02936 1.19787 0.96742 0.92271 1.00949 1.21113 0.92114 0.98252 0.97101 1.20394 0.93937 0.93493 1.09044 1.18080 0.87360 0.83402 0.76439 1.90848 1.13018 1.87241 1.47993 1.45887 1.09959 1.05312 1.75963 1.22462 0.97728 0.80854 0.96744 0.86332 1.23562 1.03186 0.94575 0.97119 1.22701 1.00465 0.93862 0.96912 0.87161 1.21728 0.93593 0.90990 0.91233 1.48703 1.22609 1.35439 1.08583 1.22573 1.00969 1.00302 0.85612 1.21558 0.99847 1.07130 1.01882 1.23937 1.00050 0.99590 0.90616 1.77343 1.00994 1.09690 1.23615 1.23377 1.00483 0.94666 0.99126 1.18233 0.83956 0.89684 0.93672 1.84805 1.14068 1.95859 1.33070 1.20657 0.93974 0.95766 1.04751 1.24913 1.05096 0.98824 0.88727 1.86684 1.36473 1.93225 1.16073 0.95149 0.77918 0.77696 0.90269 1.21176 0.92904 0.98563 0.97251 0.90728 0.91018 0.90885 0.85197 0.76593 0.90713 0.89610 0.88572 0.89457 0.81113 0.83543 0.80039 0.89186 0.89847 0.74690 0.86576 0.77913 1.17942 1.18382 0.84618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.46 10.00 36.01 0.36 0.82 16 2 C -0.10 0.18 5.87 -104.67 -0.61 -0.43 16 3 C -0.07 0.11 9.18 -39.20 -0.36 -0.25 16 4 C -0.16 -0.19 5.89 -104.85 -0.62 -0.81 16 5 C 0.56 1.40 7.76 -12.47 -0.10 1.31 16 6 O -0.52 -3.32 14.76 -16.60 -0.24 -3.57 16 7 N -0.72 0.65 5.30 -54.05 -0.29 0.36 16 8 C 0.13 -0.09 4.24 -67.12 -0.28 -0.37 16 9 H 0.12 0.21 7.46 -51.93 -0.39 -0.18 16 10 C -0.15 0.18 7.43 -25.92 -0.19 -0.01 16 11 C -0.12 0.20 3.87 -89.81 -0.35 -0.15 16 12 H 0.11 0.07 7.97 -51.93 -0.41 -0.34 16 13 C 0.15 -0.30 6.34 -4.04 -0.03 -0.32 16 14 N -0.37 -0.40 3.68 -61.37 -0.23 -0.62 16 15 C 0.05 0.00 11.45 -17.23 -0.20 -0.19 16 16 C -0.27 -0.26 10.80 -40.01 -0.43 -0.69 16 17 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 18 N -0.29 -1.04 12.28 30.63 0.38 -0.67 16 19 C -0.14 0.41 7.39 -25.92 -0.19 0.21 16 20 C 0.19 0.39 6.69 -38.70 -0.26 0.14 16 21 O -0.47 -1.62 10.91 -40.52 -0.44 -2.07 16 22 C -0.15 -0.04 5.27 -104.51 -0.55 -0.59 16 23 C -0.07 0.00 2.38 36.01 0.09 0.08 16 24 O -0.52 -1.25 12.88 -35.23 -0.45 -1.70 16 25 Si 0.69 -1.04 30.24 -169.99 -5.14 -6.18 16 26 C -0.08 0.10 8.31 -39.54 -0.33 -0.22 16 27 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 28 H 0.07 -0.35 8.08 -51.93 -0.42 -0.77 16 29 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 30 H 0.13 -0.59 6.40 -52.48 -0.34 -0.92 16 31 H 0.40 -1.52 6.76 -40.82 -0.28 -1.80 16 32 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 33 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 34 H 0.10 -0.44 7.77 -51.93 -0.40 -0.84 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 37 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.18 -0.09 8.06 -52.49 -0.42 -0.52 16 39 H 0.09 -0.44 8.08 -51.93 -0.42 -0.86 16 40 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 41 H 0.39 -0.09 9.06 45.56 0.41 0.33 16 42 H 0.12 -0.07 7.83 -51.93 -0.41 -0.47 16 43 H 0.37 -0.23 8.70 45.56 0.40 0.16 16 44 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 45 H -0.26 0.05 6.69 56.52 0.38 0.42 16 46 H 0.14 -0.37 4.83 -52.48 -0.25 -0.63 16 LS Contribution 384.39 15.07 5.79 5.79 Total: 0.00 -11.63 384.39 -10.40 -22.03 By element: Atomic # 1 Polarization: -6.27 SS G_CDS: -5.52 Total: -11.79 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -4.26 Total: -1.60 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -0.14 Total: -0.93 kcal Atomic # 8 Polarization: -6.19 SS G_CDS: -1.14 Total: -7.33 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.14 Total: -6.18 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -11.63 -10.40 -22.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.750 kcal (2) G-P(sol) polarization free energy of solvation -11.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.030 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds